Fish Of Japan

Fish are aquatic, craniate, gill-bearing animals that lack limbs with digits. Included in this definition are the living hagfish, lampreys, and cartilaginous and bony fish as well as various extinct related groups. Approximately 95% of living fish species are ray-finned fish, belonging to the class Actinopterygii, with around 99% of those being teleosts.

The earliest organisms that can be classified as fish were soft-bodied chordates that first appeared during the Cambrian period. Although they lacked a true spine, they possessed notochords which allowed them to be more agile than their invertebrate counterparts. Fish would continue to evolve through the Paleozoic era, diversifying into a wide variety of forms. Many fish of the Paleozoic developed external armor that protected them from predators. The first fish with jaws appeared in the Silurian period, after which many (such as sharks) became formidable marine predators rather than just the prey of arthropods.

Most fish are ectothermic ("cold-blooded"), allowing their body temperatures to vary as ambient temperatures change, though some of the large active swimmers like white shark and tuna can hold a higher core temperature. Fish can acoustically communicate with each other, most often in the context of feeding, aggression or courtship.

Fish are abundant in most bodies of water. They can be found in nearly all aquatic environments, from high mountain streams (e.g., char and gudgeon) to the abyssal and even hadal depths of the deepest oceans (e.g., cusk-eels and snailfish), although no species has yet been documented in the deepest 25% of the ocean. With 34,300 described species, fish exhibit greater species diversity than any other group of vertebrates.

Fish are an important resource for humans worldwide, especially as food. Commercial and subsistence fishers hunt fish in wild fisheries or farm them in ponds or in cages in the ocean (in aquaculture). They are also caught by recreational fishers, kept as pets, raised by fishkeepers, and exhibited in public aquaria. Fish have had a role in culture through the ages, serving as deities, religious symbols, and as the subjects of art, books and movies.

Tetrapods (amphibians, reptiles, birds and mammals) emerged within lobe-finned fishes, so cladistically they are fish as well. However, traditionally fish (pisces or ichthyes) are rendered paraphyletic by excluding the tetrapods, and are therefore not considered a formal taxonomic grouping in systematic biology, unless it is used in the cladistic sense, including tetrapods, although usually "vertebrate" is preferred and used for this purpose (fish plus tetrapods) instead. Furthermore, cetaceans, although mammals, have often been considered fish by various cultures and time periods.

Etymology

The word for ''fish'' in English and the other Germanic languages (German ; Gothic ) is inherited from Proto-Germanic, and is related to the Latin and Old Irish , though the exact root is unknown; some authorities reconstruct a Proto-Indo-European root , attested only in Italic, Celtic, and Germanic.

The English word once had a much broader usage than its current biological meaning. Names such as starfish, jellyfish, shellfish and cuttlefish attest to almost any fully aquatic animal (including whales) once being ''fish''. "Correcting" such names (e.g. to ''sea star'') is an attempt to retroactively apply the current meaning of ''fish'' to words that were coined when it had a different meaning.

Evolution

Fish, as vertebrata, developed as sister of the tunicata. As the tetrapods emerged deep within the fishes group, as sister of the lungfish, characteristics of fish are typically shared by tetrapods, including having vertebrae and a cranium.

Early fish from the fossil record are represented by a group of small, jawless, armored fish known as ostracoderms. Jawless fish lineages are mostly extinct. An extant clade, the lampreys may approximate ancient pre-jawed fish. The first jaws are found in Placodermi fossils. They lacked distinct teeth, having instead the oral surfaces of their jaw plates modified to serve the various purposes of teeth. The diversity of jawed vertebrates may indicate the evolutionary advantage of a jawed mouth. It is unclear if the advantage of a hinged jaw is greater biting force, improved respiration, or a combination of factors.

Fish may have evolved from a creature similar to a coral-like sea squirt, whose larvae resemble primitive fish in important ways. The first ancestors of fish may have kept the larval form into adulthood (as some sea squirts do today).

Phylogeny

Fishes are a paraphyletic group: that is, any clade containing all fish also contains the tetrapods, which are not fish (though they include fish-shaped forms, such as Whales and Dolphins or the extinct ichthyosaurs, which acquired a fish-like body shape due to secondary aquatic adaptation, see evolution of cetaceans).

The following cladogram shows clades - some with, some without extant relatives - that are traditionally considered as "fishes" (cyan line) and the tetrapods (four-limbed vertebrates), which are mostly terrestrial. Extinct groups are marked with a dagger (†).

Taxonomy

Fishes are a paraphyletic group and for this reason, groups such as the class ''Pisces'' seen in older reference works are no longer used in formal classifications. Traditional classification divides fish into three extant classes, and with extinct forms sometimes classified within the tree, sometimes as their own classes: Romer, A.S. & T.S. Parsons. 1977. ''The Vertebrate Body.'' 5th ed. Saunders, Philadelphia. (6th ed. 1985)
* Class Agnatha (jawless fish)
** Subclass Cyclostomata (hagfish and lampreys)
** Subclass Ostracodermi (armoured jawless fish) †
* Class Chondrichthyes (cartilaginous fish)
** Subclass Elasmobranchii (sharks and rays)
** Subclass Holocephali (chimaeras and extinct relatives)
* Class Placodermi (armoured fish) †
* Class Acanthodii ("spiny sharks", sometimes classified under Actinopterygii)
* Class Osteichthyes (bony fish)
** Subclass Actinopterygii (ray finned fishes)
** Subclass Sarcopterygii (lobe finned fishes, ancestors of tetrapods)

The above scheme is the one most commonly encountered in non-specialist and general works. Many of the above groups are paraphyletic, in that they have given rise to successive groups: Agnathans are ancestral to Chondrichthyes, who again have given rise to Acanthodiians, the ancestors of Osteichthyes. With the arrival of phylogenetic nomenclature, the fishes has been split up into a more detailed scheme, with the following major groups:
* Class Myxini (hagfish)
* Class Pteraspidomorphi † (early jawless fish)
* Class Thelodonti †
* Class Anaspida †
* Class Petromyzontida or Hyperoartia
** Petromyzontidae (lampreys)
* Class Conodonta (conodonts) †
* Class Cephalaspidomorphi † (early jawless fish)
** (unranked) Galeaspida †
** (unranked) Pituriaspida †
** (unranked) Osteostraci †
* Infraphylum Gnathostomata (jawed vertebrates)
** Class Placodermi † (armoured fish)
** Class Chondrichthyes (cartilaginous fish)
** Class Acanthodii † (spiny sharks)
** Superclass Osteichthyes (bony fish)
*** Class Actinopterygii (ray-finned fish)
**** Subclass Chondrostei
***** Order Acipenseriformes (sturgeons and paddlefishes)
***** Order Polypteriformes ( reedfishes and bichirs).
**** Subclass Neopterygii
***** Infraclass Holostei ( gars and bowfins)
***** Infraclass Teleostei (many orders of common fish)
*** Class Sarcopterygii (lobe-finned fish)
**** Subclass Actinistia (coelacanths)
**** Subclass Dipnoi (lungfish, sister group to the tetrapods)

† – indicates extinct taxon
Some palaeontologists contend that because Conodonta are chordates, they are primitive fish. For a fuller treatment of this taxonomy, see the vertebrate article.

The position of hagfish in the phylum Chordata is not settled. Phylogenetic research in 1998 and 1999 supported the idea that the hagfish and the lampreys form a natural group, the Cyclostomata, that is a sister group of the Gnathostomata.

The various fish groups account for more than half of vertebrate species. As of 2006, there are almost 28,000 known extant species, of which almost 27,000 are bony fish, with 970 sharks, rays, and chimeras and about 108 hagfish and lampreys. A third of these species fall within the nine largest families; from largest to smallest, these families are Cyprinidae, Gobiidae, Cichlidae, Characidae, Loricariidae, Balitoridae, Serranidae, Labridae, and Scorpaenidae. About 64 families are monotypic, containing only one species. The final total of extant species may grow to exceed 32,500. Each year, new species are discovered and scientifically described. As of 2016, there are over 32,000 documented species of bony fish and over 1,100 species of cartilaginous fish. Species are lost through extinction (see biodiversity crisis). Recent examples are the Chinese paddlefish or the smooth handfish.

Diversity

Pacific_hagfish_Myxine.jpg, Agnatha
( Pacific hagfish)
Hornhai (Heterodontus francisci).JPG, Chondrichthyes
( Horn shark)
Salmo trutta.jpg, Actinopterygii
(Brown trout)
Latimeria chalumnae01.jpg, Sarcopterygii
(Coelacanth)

The term "fish" most precisely describes any non-tetrapod craniate (i.e. an animal with a skull and in most cases a backbone) that has gills throughout life and whose limbs, if any, are in the shape of fins. Unlike groupings such as birds or mammals, fish are not a single clade but a paraphyletic collection of taxa, including hagfishes, lampreys, sharks and rays, ray-finned fish, coelacanths, and lungfish. Indeed, lungfish and coelacanths are closer relatives of tetrapods (such as mammals, birds, amphibians, etc.) than of other fish such as ray-finned fish or sharks, so the last common ancestor of all fish is also an ancestor to tetrapods. As paraphyletic groups are no longer recognised in modern systematic biology, the use of the term "fish" as a biological group must be avoided.

Many types of aquatic animals commonly referred to as "fish" are not fish in the sense given above; examples include shellfish, cuttlefish, starfish, crayfish and jellyfish. In earlier times, even biologists did not make a distinction – sixteenth century natural historians classified also seals, whales, amphibians, crocodiles, even hippopotamuses, as well as a host of aquatic invertebrates, as fish. However, according to the definition above, all mammals, including cetaceans like whales and dolphins, are not fish. In some contexts, especially in aquaculture, the true fish are referred to as finfish (or fin fish) to distinguish them from these other animals.

A typical fish is ectothermic, has a streamlined body for rapid swimming, extracts oxygen from water using gills or uses an accessory breathing organ to breathe atmospheric oxygen, has two sets of paired fins, usually one or two (rarely three) dorsal fins, an anal fin, and a tail fin, has jaws, has skin that is usually covered with scales, and lays eggs.

Each criterion has exceptions. Tuna, swordfish, and some species of sharks show some warm-blooded adaptations – they can heat their bodies significantly above ambient water temperature. Streamlining and swimming performance varies from fish such as tuna, salmon, and jacks that can cover 10–20 body-lengths per second to species such as eels and rays that swim no more than 0.5 body-lengths per second. Many groups of freshwater fish extract oxygen from the air as well as from the water using a variety of different structures. Lungfish have paired lungs similar to those of tetrapods, gouramis have a structure called the labyrinth organ that performs a similar function, while many catfish, such as '' Corydoras'' extract oxygen via the intestine or stomach. Body shape and the arrangement of the fins is highly variable, covering such seemingly un-fishlike forms as seahorses, pufferfish, anglerfish, and gulpers. Similarly, the surface of the skin may be naked (as in moray eels), or covered with scales of a variety of different types usually defined as placoid (typical of sharks and rays), cosmoid (fossil lungfish and coelacanths), ganoid (various fossil fish but also living gars and bichirs), cycloid, and ctenoid (these last two are found on most bony fish). There are even fish that live mostly on land or lay their eggs on land near water. Mudskippers feed and interact with one another on mudflats and go underwater to hide in their burrows. A single undescribed species of ''Phreatobius'' has been called a true "land fish" as this worm-like catfish strictly lives among waterlogged leaf litter. Many species live in underground lakes, underground rivers or aquifers and are popularly known as cavefish.

Fish range in size from the huge whale shark to the tiny stout infantfish.

Fish species diversity is roughly divided equally between marine (oceanic) and freshwater ecosystems. Coral reefs in the Indo-Pacific constitute the center of diversity for marine fishes, whereas continental freshwater fishes are most diverse in large river basins of tropical rainforests, especially the Amazon, Congo, and Mekong basins. More than 5,600 fish species inhabit Neotropical freshwaters alone, such that Neotropical fishes represent about 10% of all vertebrate species on the Earth. Exceptionally rich sites in the Amazon basin, such as Cantão State Park, can contain more freshwater fish species than occur in all of Europe.

The deepest living fish in the ocean so far found is the Mariana snailfish (''Pseudoliparis swirei'') which lives at deeps of 8,000 meters (26,200 feet) along the Mariana Trench near Guam.

The diversity of living fish (finfish) is unevenly distributed among the various groups, with teleosts making up the bulk of living fishes (96%), and over 50% of all vertebrate species. The following cladogram shows the evolutionary relationships of all groups of living fishes (with their respective diversity) and the four-limbed vertebrates (tetrapods).

Anatomy and physiology

Respiration

Gills

Most fish exchange gases using gills on either side of the pharynx. Gills consist of threadlike structures called filaments. Each filament contains a capillary network that provides a large surface area for exchanging oxygen and carbon dioxide. Fish exchange gases by pulling oxygen-rich water through their mouths and pumping it over their gills. In some fish, capillary blood flows in the opposite direction to the water, causing countercurrent exchange. The gills push the oxygen-poor water out through openings in the sides of the pharynx. Some fish, like sharks and lampreys, possess multiple gill openings. However, bony fish have a single gill opening on each side. This opening is hidden beneath a protective bony cover called an operculum.

Juvenile bichirs have external gills, a very primitive feature that they share with larval amphibians.

Air breathing

Fish from multiple groups can live out of the water for extended periods. Amphibious fish such as the mudskipper can live and move about on land for up to several days, or live in stagnant or otherwise oxygen-depleted water. Many such fish can breathe air via a variety of mechanisms. The skin of anguillid eels may absorb oxygen directly. The buccal cavity of the electric eel may breathe air. Catfish of the families Loricariidae, Callichthyidae, and Scoloplacidae absorb air through their digestive tracts. Lungfish, with the exception of the Australian lungfish, and bichirs have paired lungs similar to those of tetrapods and must surface to gulp fresh air through the mouth and pass spent air out through the gills. Gar and bowfin have a vascularized swim bladder that functions in the same way. Loaches, trahiras, and many catfish breathe by passing air through the gut. Mudskippers breathe by absorbing oxygen across the skin (similar to frogs). A number of fish have evolved so-called accessory breathing organs that extract oxygen from the air. Labyrinth fish (such as gouramis and bettas) have a labyrinth organ above the gills that performs this function. A few other fish have structures resembling labyrinth organs in form and function, most notably snakeheads, pikeheads, and the Clariidae catfish family.

Breathing air is primarily of use to fish that inhabit shallow, seasonally variable waters where the water's oxygen concentration may seasonally decline. Fish dependent solely on dissolved oxygen, such as perch and cichlids, quickly suffocate, while air-breathers survive for much longer, in some cases in water that is little more than wet mud. At the extreme, some air-breathing fish are able to survive in damp burrows for weeks without water, entering a state of aestivation (summertime hibernation) until water returns.

Air breathing fish can be divided into obligate air breathers and facultative air breathers. Obligate air breathers, such as the African lungfish, ''must'' breathe air periodically or they suffocate. Facultative air breathers, such as the catfish '' Hypostomus plecostomus'', only breathe air if they need to and will otherwise rely on their gills for oxygen. Most air breathing fish are facultative air breathers that avoid the energetic cost of rising to the surface and the fitness cost of exposure to surface predators.

Circulation

Fish have a closed-loop circulatory system. The heart pumps the blood in a single loop throughout the body. In most fish, the heart consists of four parts, including two chambers and an entrance and exit. The first part is the sinus venosus, a thin-walled sac that collects blood from the fish's veins before allowing it to flow to the second part, the atrium, which is a large muscular chamber. The atrium serves as a one-way antechamber, sends blood to the third part, ventricle. The ventricle is another thick-walled, muscular chamber and it pumps the blood, first to the fourth part, bulbus arteriosus, a large tube, and then out of the heart. The bulbus arteriosus connects to the aorta, through which blood flows to the gills for oxygenation.

Digestion

Jaws allow fish to eat a wide variety of food, including plants and other organisms. Fish ingest food through the mouth and break it down in the esophagus. In the stomach, food is further digested and, in many fish, processed in finger-shaped pouches called pyloric caeca, which secrete digestive enzymes and absorb nutrients. Organs such as the liver and pancreas add enzymes and various chemicals as the food moves through the digestive tract. The intestine completes the process of digestion and nutrient absorption.

Excretion

As with many aquatic animals, most fish release their nitrogenous wastes as ammonia. Some of the wastes diffuse through the gills. Blood wastes are filtered by the kidneys.

Saltwater fish tend to lose water because of osmosis. Their kidneys return water to the body. The reverse happens in freshwater fish: they tend to gain water osmotically. Their kidneys produce dilute urine for excretion. Some fish have specially adapted kidneys that vary in function, allowing them to move from freshwater to saltwater.

Scales

The scales of fish originate from the mesoderm (skin); they may be similar in structure to teeth.

Sensory and nervous system

Central nervous system

Fish typically have quite small brains relative to body size compared with other vertebrates, typically one-fifteenth the brain mass of a similarly sized bird or mammal. However, some fish have relatively large brains, most notably mormyrids and sharks, which have brains about as massive relative to body weight as birds and marsupials.

Fish brains are divided into several regions. At the front are the olfactory lobes, a pair of structures that receive and process signals from the nostrils via the two olfactory nerves. The olfactory lobes are very large in fish that hunt primarily by smell, such as hagfish, sharks, and catfish. Behind the olfactory lobes is the two-lobed telencephalon, the structural equivalent to the cerebrum in higher vertebrates. In fish the telencephalon is concerned mostly with olfaction. Together these structures form the forebrain.

Connecting the forebrain to the midbrain is the diencephalon (in the diagram, this structure is below the optic lobes and consequently not visible). The diencephalon performs functions associated with hormones and homeostasis. The pineal body lies just above the diencephalon. This structure detects light, maintains circadian rhythms, and controls color changes.

The midbrain (or mesencephalon) contains the two optic lobes. These are very large in species that hunt by sight, such as rainbow trout and cichlids.

The hindbrain (or metencephalon) is particularly involved in swimming and balance. The cerebellum is a single-lobed structure that is typically the biggest part of the brain. Hagfish and lampreys have relatively small cerebellae, while the mormyrid cerebellum is massive and apparently involved in their electrical sense.

The brain stem (or myelencephalon) is the brain's posterior. As well as controlling some muscles and body organs, in bony fish at least, the brain stem governs respiration and osmoregulation.

Sense organs

Most fish possess highly developed sense organs. Nearly all daylight fish have color vision that is at least as good as a human's (see vision in fishes). Many fish also have chemoreceptors that are responsible for extraordinary senses of taste and smell. Although they have ears, many fish may not hear very well. Most fish have sensitive receptors that form the lateral line system, which detects gentle currents and vibrations, and senses the motion of nearby fish and prey. The sense information obtained from the lateral line system can be considered both a sense of touch and hearing. Blind cave fish navigate almost entirely through the sensations from their lateral line system. Some fish, such as catfish and sharks, have the ampullae of Lorenzini, electroreceptors that detect weak electric currents on the order of millivolt. Other fish, like the South American electric fishes Gymnotiformes, can produce weak electric currents, which they use in navigation and social communication.

Fish orient themselves using landmarks and may use mental maps based on multiple landmarks or symbols. Fish behavior in mazes reveals that they possess spatial memory and visual discrimination.

Vision

Vision is an important sensory system for most species of fish. Fish eyes are similar to those of terrestrial vertebrates like birds and mammals, but have a more spherical lens. Their retinas generally have both rods and cones (for scotopic and photopic vision), and most species have colour vision. Some fish can see ultraviolet and some can see polarized light. Amongst jawless fish, the lamprey has well-developed eyes, while the hagfish has only primitive eyespots. Fish vision shows adaptation to their visual environment, for example deep sea fishes have eyes suited to the dark environment.

Hearing

Hearing is an important sensory system for most species of fish. Fish sense sound using their lateral lines and their ears.

Cognition

New research has expanded preconceptions about the cognitive capacities of fish. For example, manta rays have exhibited behavior linked to self-awareness in mirror test cases. Placed in front of a mirror, individual rays engaged in contingency testing, that is, repetitive behavior aiming to check whether their reflection's behavior mimics their body movement.

Wrasses have also passed the mirror test in a 2018 scientific study.

Cases of tool use have also been noticed, notably in the Choerodon family, in archerfish and Atlantic cod.

Capacity for pain

Experiments done by William Tavolga provide evidence that fish have pain and fear responses. For instance, in Tavolga's experiments, toadfish grunted when electrically shocked and over time they came to grunt at the mere sight of an electrode.

In 2003, Scottish scientists at the University of Edinburgh and the Roslin Institute concluded that rainbow trout exhibit behaviors often associated with pain in other animals. Bee venom and acetic acid injected into the lips resulted in fish rocking their bodies and rubbing their lips along the sides and floors of their tanks, which the researchers concluded were attempts to relieve pain, similar to what mammals would do. Neurons fired in a pattern resembling human neuronal patterns.

Professor James D. Rose of the University of Wyoming claimed the study was flawed since it did not provide proof that fish possess "conscious awareness, particularly a kind of awareness that is meaningfully like ours". Rose argues that since fish brains are so different from human brains, fish are probably not conscious in the manner humans are, so that reactions similar to human reactions to pain instead have other causes. Rose had published a study a year earlier arguing that fish cannot feel pain because their brains lack a neocortex. However, animal behaviorist Temple Grandin argues that fish could still have consciousness without a neocortex because "different species can use different brain structures and systems to handle the same functions."

Animal welfare advocates raise concerns about the possible suffering of fish caused by angling. Some countries, such as Germany, have banned specific types of fishing, and the British RSPCA now formally prosecutes individuals who are cruel to fish.

Emotion

In 2019, scientists have shown that members of the monogamous species ''Amatitlania siquia'' exhibit pessimistic behavior when they are prevented from being with their partner.

Muscular system

Most fish move by alternately contracting paired sets of muscles on either side of the backbone. These contractions form S-shaped curves that move down the body. As each curve reaches the back fin, backward force is applied to the water, and in conjunction with the fins, moves the fish forward. The fish's fins function like an airplane's flaps. Fins also increase the tail's surface area, increasing speed. The streamlined body of the fish decreases the amount of friction from the water. Since body tissue is denser than water, fish must compensate for the difference or they will sink. Many bony fish have an internal organ called a swim bladder that adjusts their buoyancy through manipulation of gases.

Endothermy

Although most fish are exclusively ectothermic, there are exceptions. The only known bony fishes (infraclass Teleostei) that exhibit endothermy are in the suborder Scombroidei – which includes the billfishes, tunas, and the butterfly kingfish, a basal species of mackerel – and also the opah. The opah, a lampriform, was demonstrated in 2015 to use "whole-body endothermy", generating heat with its swimming muscles to warm its body while countercurrent exchange (as in respiration) minimizes heat loss. It is able to actively hunt prey such as squid and swim for long distances due to the ability to warm its entire body, including its heart, which is a trait typically found in only mammals and birds (in the form of homeothermy). In the cartilaginous fishes (class Chondrichthyes), sharks of the families Lamnidae (porbeagle, mackerel, salmon, and great white sharks) and Alopiidae (thresher sharks) exhibit endothermy. The degree of endothermy varies from the billfishes, which warm only their eyes and brain, to the bluefin tuna and the porbeagle shark, which maintain body temperatures in excess of above ambient water temperatures.

Endothermy, though metabolically costly, is thought to provide advantages such as increased muscle strength, higher rates of central nervous system processing, and higher rates of digestion.

Reproductive system

Fish reproductive organs include testicles and ovaries. In most species, gonads are paired organs of similar size, which can be partially or totally fused. There may also be a range of secondary organs that increase reproductive fitness.

In terms of spermatogonia distribution, the structure of teleosts testes has two types: in the most common, spermatogonia occur all along the seminiferous tubules, while in atherinomorph fish they are confined to the distal portion of these structures. Fish can present cystic or semi-cystic spermatogenesis in relation to the release phase of germ cells in cysts to the seminiferous tubules lumen.

Fish ovaries may be of three types: gymnovarian, secondary gymnovarian or cystovarian. In the first type, the oocytes are released directly into the coelomic cavity and then enter the ostium, then through the oviduct and are eliminated. Secondary gymnovarian ovaries shed ova into the coelom from which they go directly into the oviduct. In the third type, the oocytes are conveyed to the exterior through the oviduct. Gymnovaries are the primitive condition found in lungfish, sturgeon, and bowfin. Cystovaries characterize most teleosts, where the ovary lumen has continuity with the oviduct. Secondary gymnovaries are found in salmonids and a few other teleosts.

Oogonia development in teleosts fish varies according to the group, and the determination of oogenesis dynamics allows the understanding of maturation and fertilization processes. Changes in the nucleus, ooplasm, and the surrounding layers characterize the oocyte maturation process.

Postovulatory follicles are structures formed after oocyte release; they do not have endocrine function, present a wide irregular lumen, and are rapidly reabsorbed in a process involving the apoptosis of follicular cells. A degenerative process called follicular atresia reabsorbs vitellogenic oocytes not spawned. This process can also occur, but less frequently, in oocytes in other development stages.

Some fish, like the California sheephead, are hermaphrodites, having both testes and ovaries either at different phases in their life cycle or, as in hamlets, have them simultaneously.

Over 97% of all known fish are oviparous,Peter Scott: ''Livebearing Fishes'', p. 13. Tetra Press 1997. that is, the eggs develop outside the mother's body. Examples of oviparous fish include salmon, goldfish, cichlids, tuna, and eels. In the majority of these species, fertilisation takes place outside the mother's body, with the male and female fish shedding their gametes into the surrounding water. However, a few oviparous fish practice internal fertilization, with the male using some sort of intromittent organ to deliver sperm into the genital opening of the female, most notably the oviparous sharks, such as the horn shark, and oviparous rays, such as skates. In these cases, the male is equipped with a pair of modified pelvic fins known as claspers.

Marine fish can produce high numbers of eggs which are often released into the open water column. The eggs have an average diameter of .

File:Oeufs002b,57.png, Egg of lamprey
File:Oeufs002b,54.png, Egg of catshark ( mermaids' purse)
File:Oeufs002b,55.png, Egg of bullhead shark
File:Oeufs002b,56.png, Egg of chimaera

The newly hatched young of oviparous fish are called larvae. They are usually poorly formed, carry a large yolk sac (for nourishment), and are very different in appearance from juvenile and adult specimens. The larval period in oviparous fish is relatively short (usually only several weeks), and larvae rapidly grow and change appearance and structure (a process termed metamorphosis) to become juveniles. During this transition larvae must switch from their yolk sac to feeding on zooplankton prey, a process which depends on typically inadequate zooplankton density, starving many larvae.

In ovoviviparous fish the eggs develop inside the mother's body after internal fertilization but receive little or no nourishment directly from the mother, depending instead on the yolk. Each embryo develops in its own egg. Familiar examples of ovoviviparous fish include guppies, angel sharks, and coelacanths.

Some species of fish are viviparous. In such species the mother retains the eggs and nourishes the embryos. Typically, viviparous fish have a structure analogous to the placenta seen in mammals connecting the mother's blood supply with that of the embryo. Examples of viviparous fish include the surf-perches, splitfins, and lemon shark. Some viviparous fish exhibit oophagy, in which the developing embryos eat other eggs produced by the mother. This has been observed primarily among sharks, such as the shortfin mako and porbeagle, but is known for a few bony fish as well, such as the halfbeak ''Nomorhamphus ebrardtii''.Meisner, A & Burns, J: Viviparity in the Halfbeak Genera ''Dermogenys'' and ''Nomorhamphus'' (Teleostei: Hemiramphidae)" ''Journal of Morphology'' 234, pp. 295–317, 1997 Intrauterine cannibalism is an even more unusual mode of vivipary, in which the largest embryos eat weaker and smaller siblings. This behavior is also most commonly found among sharks, such as the grey nurse shark, but has also been reported for ''Nomorhamphus ebrardtii''.

Aquarists commonly refer to ovoviviparous and viviparous fish as livebearers.

Acoustic communication

Acoustic communication in fish involves the transmission of acoustic signals from one individual of a species to another. The production of sounds as a means of communication among fish is most often used in the context of feeding, aggression or courtship behaviour. The sounds emitted can vary depending on the species and stimulus involved. Fish can produce either stridulatory sounds by moving components of the skeletal system, or can produce non-stridulatory sounds by manipulating specialized organs such as the swimbladder.

Stridulatory

There are some species of fish that can produce sounds by rubbing or grinding their bones together. These noises produced by bone-on-bone interactions are known as 'stridulatory sounds'.

An example of this is seen in '' Haemulon flavolineatum'', a species commonly referred to as the 'French grunt fish', as it produces a grunting noise by grinding its teeth together. This behaviour is most pronounced when the ''H. flavolineatum'' is in distress situations. The grunts produced by this species of fishes generate a frequency of approximately 700 Hz, and last approximately 47 milliseconds. The ''H. flavolineatum'' does not emit sounds with frequencies greater than 1000 Hz, and does not detect sounds that have frequencies greater than 1050 Hz.

In a study conducted by Oliveira et al. (2014), the longsnout seahorse, '' Hippocampus reidi'', was recorded producing two different categories of sounds; 'clicks' and 'growls'. The sounds emitted by the ''H. reidi'' are accomplished by rubbing their coronet bone across the grooved section of their neurocranium. 'Clicking' sounds were found to be primarily produced during courtship and feeding, and the frequencies of clicks were within the range of 50 Hz-800 Hz. The frequencies were noted to be on the higher end of the range during spawning periods, when the female and male fishes were less than fifteen centimeters apart. Growl sounds were produced when the ''H. reidi'' encountered stressful situations, such as handling by researchers. The 'growl' sounds consist of a series of sound pulses and are emitted simultaneously with body vibrations.

Non-stridulatory

Some fish species create noise by engaging specialized muscles that contract and cause swimbladder vibrations.

Oyster toadfish produce loud grunting sounds by contracting muscles located along the sides of their swim bladder, known as sonic muscles Female and male toadfishes emit short-duration grunts, often as a fright response. In addition to short-duration grunts, male toadfishes produce "boat whistle calls". These calls are longer in duration, lower in frequency, and are primarily used to attract mates. The sounds emitted by the ''O. tao'' have frequency range of 140 Hz to 260 Hz. The frequencies of the calls depend on the rate at which the sonic muscles contract.

The red drum, ''Sciaenops ocellatus'', produces drumming sounds by vibrating its swimbladder. Vibrations are caused by the rapid contraction of sonic muscles that surround the dorsal aspect of the swimbladder. These vibrations result in repeated sounds with frequencies that range from 100 to >200 Hz. The ''S. ocellatus'' can produce different calls depending on the stimuli involved. The sounds created in courtship situations are different from those made during distressing events such as predatorial attacks. Unlike the males of the ''S. ocellatus'' species, the females of this species do not produce sounds and lack sound-producing (sonic) muscles.

Diseases

Like other animals, fish suffer from diseases and parasites. To prevent disease they have a variety of defenses. ''Non-specific'' defenses include the skin and scales, as well as the mucus layer secreted by the epidermis that traps and inhibits the growth of microorganisms. If pathogens breach these defenses, fish can develop an inflammatory response that increases blood flow to the infected region and delivers white blood cells that attempt to destroy pathogens. Specific defenses respond to particular pathogens recognised by the fish's body, i.e., an immune response. In recent years, vaccines have become widely used in aquaculture and also with ornamental fish, for example furunculosis vaccines in farmed salmon and koi herpes virus in koi.

Some species use cleaner fish to remove external parasites. The best known of these are the bluestreak cleaner wrasses of the genus ''Labroides'' found on coral reefs in the Indian and Pacific oceans. These small fish maintain so-called "cleaning stations" where other fish congregate and perform specific movements to attract the attention of the cleaners. Cleaning behaviors have been observed in a number of fish groups, including an interesting case between two cichlids of the same genus, ''Etroplus maculatus'', the cleaner, and the much larger ''Etroplus suratensis''.

Immune system

Immune organs vary by type of fish. In the jawless fish (lampreys and hagfish), true lymphoid organs are absent. These fish rely on regions of lymphoid tissue within other organs to produce immune cells. For example, erythrocytes, macrophages and plasma cells are produced in the anterior kidney (or pronephros) and some areas of the gut (where granulocytes mature.) They resemble primitive bone marrow in hagfish. Cartilaginous fish (sharks and rays) have a more advanced immune system. They have three specialized organs that are unique to Chondrichthyes; the epigonal organs (lymphoid tissue similar to mammalian bone) that surround the gonads, the Leydig's organ within the walls of their esophagus, and a spiral valve in their intestine. These organs house typical immune cells (granulocytes, lymphocytes and plasma cells). They also possess an identifiable thymus and a well-developed spleen (their most important immune organ) where various lymphocytes, plasma cells and macrophages develop and are stored. Chondrostean fish (sturgeons, paddlefish, and bichirs) possess a major site for the production of granulocytes within a mass that is associated with the meninges (membranes surrounding the central nervous system.) Their heart is frequently covered with tissue that contains lymphocytes, reticular cells and a small number of macrophages. The chondrostean kidney is an important hemopoietic organ; where erythrocytes, granulocytes, lymphocytes and macrophages develop.

Like chondrostean fish, the major immune tissues of bony fish (or teleostei) include the kidney (especially the anterior kidney), which houses many different immune cells. In addition, teleost fish possess a thymus, spleen and scattered immune areas within mucosal tissues (e.g. in the skin, gills, gut and gonads). Much like the mammalian immune system, teleost erythrocytes, neutrophils and granulocytes are believed to reside in the spleen whereas lymphocytes are the major cell type found in the thymus. In 2006, a lymphatic system similar to that in mammals was described in one species of teleost fish, the zebrafish. Although not confirmed as yet, this system presumably will be where naive (unstimulated) T cells accumulate while waiting to encounter an antigen.

B and T lymphocytes bearing immunoglobulins and T cell receptors, respectively, are found in all jawed fishes. Indeed, the adaptive immune system as a whole evolved in an ancestor of all jawed vertebrates.

Conservation

The 2006 IUCN Red List names 1,173 fish species that are threatened with extinction. Included are species such as Atlantic cod