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Sutterellaceae
The Sutterellaceae are a family of the Betaproteobacteria. Cells of Sutterellaceae are Gram-negative, oxidase- and catalase-negative, and grow under microaerophilic or anaerobic Anaerobic means "living, active, occurring, or existing in the absence of free oxygen", as opposed to aerobic which means "living, active, or occurring only in the presence of oxygen." Anaerobic may also refer to: * Anaerobic adhesive, a bonding a ... atmospheres. References Burkholderiales {{betaproteobacteria-stub ...
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Parasutterella
''Parasutterella'' is a genus of Gram-negative, circular/rod-shaped, obligate anaerobic, non-spore forming bacteria from the Pseudomonadota phylum, Betaproteobacteria class and the family Sutterellaceae. Previously, this genus was considered "unculturable," meaning that it could not be characterized through conventional laboratory techniques, such as grow in culture due its unique requirements of anaerobic environment. The genus was initially discovered through 16S rRNA sequencing and bioinformatics analysis (a methodology to analyze the microbiome). By analyzing the sequence similarity, ''Parasutterella'' was determined to be related most closely to the genus '' Sutterella'' and previously classified in the family Alcaligenaceae. In 2009, '' Parasutterella excrementihominis'' was cultured and characterized. In 2011, another species of ''Parasutterella'', '' Parasutterella secunda'', was discovered, and both ''Parasutterella'' and ''Sutterella'' species were reclassified under th ...
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Sutterella
''Sutterella'' is a genus of Gram-negative, rod-shaped, non-spore-forming, Betaproteobacteria whose species have been isolated from the human gastrointestinal tract as well as canine feces. The genus of the family Sutterellaceae currently encompasses 4 distinct species, though at least 5 additional species have been proposed that do not yet meet International Code of Nomenclature of Prokaryotes (ICNP) standards for classification. ''Sutterella'' are frequently referred to as commensal in the context of human hosts, but are associated with inflammation, which has implications for a number of diseases. Characteristics ''Sutterella'' cells are 0.5 to 1 μm wide and 1 to 3 μm long. They exhibit bile resistance, are nitrate reducers, do not hydrolyze urea, and do not possess the cytochrome c oxidase enzyme. They are only able to be cultured in microaerophilic and anaerobic environments. The ''Sutterella'' genome encodes the sulfite reductase MccA. Human health Imbalances in ...
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Dakarella
''Dakarella'' is a Gram-negative genus of bacteria from the family of Sutterellaceae with one known species ('' Dakarella massiliensis''). ''Dakarella massiliensis'' has been isolated from the female genital tract The female reproductive system is made up of the internal and external sex organs that function in the reproduction of new offspring. In humans, the female reproductive system is immature at birth and develops to maturity at puberty to be able .... References Burkholderiales Bacteria genera Monotypic bacteria genera {{Betaproteobacteria-stub ...
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Duodenibacillus
''Duodenibacillus'' is a Gram-negative genus of bacteria from the family of Sutterellaceae with one known species ('' Duodenibacillus massiliensis'').''Duodenibacillus massiliensis'' has been isolated from the human duodenum The duodenum is the first section of the small intestine in most higher vertebrates, including mammals, reptiles, and birds. In fish, the divisions of the small intestine are not as clear, and the terms anterior intestine or proximal intestine m .... References Burkholderiales Bacteria genera Monotypic bacteria genera {{Betaproteobacteria-stub ...
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Turicimonas
''Turicimonas'' is a genus of bacteria from the family of Sutterellaceae The Sutterellaceae are a family of the Betaproteobacteria. Cells of Sutterellaceae are Gram-negative, oxidase- and catalase-negative, and grow under microaerophilic or anaerobic Anaerobic means "living, active, occurring, or existing in the abse ... with one known species ('' Turicimonas muris''). ''Turicimonas muris'' has been isolated from the caecal content of a mouse. References Burkholderiales Bacteria genera Monotypic bacteria genera {{Betaproteobacteria-stub ...
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Betaproteobacteria
Betaproteobacteria are a class of Gram-negative bacteria, and one of the eight classes of the phylum Pseudomonadota (synonym Proteobacteria). The ''Betaproteobacteria'' are a class comprising over 75 genera and 400 species of bacteria. Together, the ''Betaproteobacteria'' represent a broad variety of metabolic strategies and occupy diverse environments from obligate pathogens living within host organisms to oligotrophic groundwater ecosystems. Whilst most members of the ''Betaproteobacteria'' are heterotrophic, deriving both their carbon and electrons from organocarbon sources, some are photoheterotrophic, deriving energy from light and carbon from organocarbon sources. Other genera are autotrophic, deriving their carbon from bicarbonate or carbon dioxide and their electrons from reduced inorganic ions such as nitrite, ammonium, thiosulfate or sulfide — many of these chemolithoautotrophic. ''Betaproteobacteria'' are economically important, with roles in maintaining soil p ...
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Burkholderiales
The Burkholderiales are an order of Pseudomonadota.George M. Garrity: '' Bergey's Manual of Systematic Bacteriology''. 2. Auflage. Springer, New York, 2005, Vol. 2: ''The Proteobacteria Part C: The Alpha-, Beta-, Delta-, and Epsilonproteabacteria'' Like all Pseudomonadota, they are Gram-negative. They include several pathogenic bacteria, including species of ''Burkholderia'', ''Bordetella'', and ''Ralstonia''. They also include '' Oxalobacter'' and related genera, which are unusual in using oxalic acid as their source of carbon. Other well-studied genera include ''Alcaligenes'', '' Cupriavidus'', ''Achromobacter'', ''Comamonas'', '' Delftia'', ''Massilia'', '' Duganella'', '' Janthinobacterium'', ''Polynucleobacter'' (important freshwater bacterioplankton), non-pathogenic ''Paraburkholderia'', '' Caballeronia'', '' Polaromonas'', ''Thiomonas'', ''Collimonas'', '' Hydrogenophaga'', ''Sphaerotilus'', '' Variovorax'', '' Acidovorax'', '' Rubrivivax'' and ''Rhodoferax'' (both members ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as ''Escherichia'', '' Salmonella'', ''Vibrio'', ''Yersinia'', ''Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (nonparasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the Internat ...
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Oxidase
In biochemistry, an oxidase is an enzyme that catalyzes oxidation-reduction reactions, especially one involving dioxygen (O2) as the electron acceptor. In reactions involving donation of a hydrogen atom, oxygen is reduced to water (H2O) or hydrogen peroxide (H2O2). Some oxidation reactions, such as those involving monoamine oxidase or xanthine oxidase, typically do not involve free molecular oxygen. The oxidases are a subclass of the oxidoreductases. Examples An important example is cytochrome c oxidase, the key enzyme that allows the body to employ oxygen in the generation of energy and the final component of the electron transfer chain. Other examples are: * Glucose oxidase * Monoamine oxidase * Cytochrome P450 oxidase * NADPH oxidase * Xanthine oxidase * L-gulonolactone oxidase * Laccase * Lysyl oxidase * Polyphenol oxidase * Sulfhydryl oxidase. This enzyme oxidises thiol groups. Oxidase test In microbiology, the oxidase test is used as a phenotypic characteristic for t ...
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Catalase
Catalase is a common enzyme found in nearly all living organisms exposed to oxygen (such as bacteria, plants, and animals) which catalyzes the decomposition of hydrogen peroxide to water and oxygen. It is a very important enzyme in protecting the cell from oxidative damage by reactive oxygen species (ROS). Catalase has one of the highest turnover numbers of all enzymes; one catalase molecule can convert millions of hydrogen peroxide molecules to water and oxygen each second. Catalase is a tetramer of four polypeptide chains, each over 500 amino acids long. It contains four iron-containing heme groups that allow the enzyme to react with hydrogen peroxide. The optimum pH for human catalase is approximately 7, and has a fairly broad maximum: the rate of reaction does not change appreciably between pH 6.8 and 7.5. The pH optimum for other catalases varies between 4 and 11 depending on the species. The optimum temperature also varies by species. Structure Human catalase forms a t ...
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