Toxicodynamic
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Toxicodynamics, termed
pharmacodynamics Pharmacodynamics (PD) is the study of the biochemical and physiologic effects of drugs (especially pharmaceutical drugs). The effects can include those manifested within animals (including humans), microorganisms, or combinations of organisms (fo ...
in
pharmacology Pharmacology is a branch of medicine, biology and pharmaceutical sciences concerned with drug or medication action, where a drug may be defined as any artificial, natural, or endogenous (from within the body) molecule which exerts a biochemica ...
, describes the dynamic interactions of a toxicant with a biological target and its biological effects.Boelsterli, 2003 A
biological target A biological target is anything within a living organism to which some other entity (like an endogenous ligand or a drug) is directed and/or binds, resulting in a change in its behavior or function. Examples of common classes of biological targets ...
, also known as the site of action, can be binding proteins,
ion channel Ion channels are pore-forming membrane proteins that allow ions to pass through the channel pore. Their functions include establishing a resting membrane potential, shaping action potentials and other electrical signals by gating the flow of io ...
s, DNA, or a variety of other receptors. When a
toxicant A toxicant is any toxic substance, whether man-made or naturally occurring. By contrast, a toxin is a poison produced naturally by an organism (e.g. plant, animal, insect). The different types of toxicants can be found in the air, soil, water, or ...
enters an organism, it can interact with these receptors and produce structural or functional alterations. The
mechanism of action In pharmacology, the term mechanism of action (MOA) refers to the specific biochemical interaction through which a drug substance produces its pharmacological effect. A mechanism of action usually includes mention of the specific molecular targe ...
of the toxicant, as determined by a toxicant’s chemical properties, will determine what receptors are targeted and the overall toxic effect at the cellular level and organismal level. Toxicants have been grouped together according to their chemical properties by way of
quantitative structure-activity relationship Quantitative may refer to: * Quantitative research, scientific investigation of quantitative properties * Quantitative analysis (disambiguation) * Quantitative verse, a metrical system in poetry * Statistics, also known as quantitative analysis ...
s (QSARs), which allows prediction of toxic action based on these properties. endocrine disrupting chemicals (EDCs) and
carcinogen A carcinogen is any substance, radionuclide, or radiation that promotes carcinogenesis (the formation of cancer). This may be due to the ability to damage the genome or to the disruption of cellular metabolic processes. Several radioactive substan ...
s are examples of classes of toxicants that can act as QSARs. EDCs mimic or block transcriptional activation normally caused by natural
steroid hormone A steroid hormone is a steroid that acts as a hormone. Steroid hormones can be grouped into two classes: corticosteroids (typically made in the adrenal cortex, hence ''cortico-'') and sex steroids (typically made in the gonads or placenta). Wi ...
s. These types of chemicals can act on
androgen receptor The androgen receptor (AR), also known as NR3C4 (nuclear receptor subfamily 3, group C, member 4), is a type of nuclear receptor that is activated by binding any of the androgenic hormones, including testosterone and dihydrotestosterone in th ...
s,
estrogen receptor Estrogen receptors (ERs) are a group of proteins found inside cells. They are receptors that are activated by the hormone estrogen ( 17β-estradiol). Two classes of ER exist: nuclear estrogen receptors (ERα and ERβ), which are members of the ...
s and
thyroid hormone receptor The thyroid hormone receptor (TR) is a type of nuclear receptor that is activated by binding thyroid hormone. TRs act as transcription factors, ultimately affecting the regulation of gene transcription and translation. These receptors also have ...
s. This mechanism can include such toxicants as
dichlorodiphenyltrichloroethane Dichlorodiphenyltrichloroethane, commonly known as DDT, is a colorless, tasteless, and almost odorless crystalline chemical compound, an organochloride. Originally developed as an insecticide, it became infamous for its environmental impacts. ...
(DDE) and
polychlorinated biphenyls Polychlorinated biphenyls (PCBs) are highly carcinogenic chemical compounds, formerly used in industrial and consumer products, whose production was banned in the United States by the Toxic Substances Control Act of 1976, Toxic Substances Contro ...
(PCBs). Another class of chemicals, carcinogens, are substances that cause
cancer Cancer is a group of diseases involving abnormal cell growth with the potential to invade or spread to other parts of the body. These contrast with benign tumors, which do not spread. Possible signs and symptoms include a lump, abnormal b ...
and can be classified as
genotoxic Genotoxicity is the property of chemical agents that damage the genetic information within a cell causing mutations, which may lead to cancer. While genotoxicity is often confused with Mutagen, mutagenicity, all mutagens are genotoxic, but some geno ...
or nongenotoxic carcinogens. These categories include toxicants such as
polycyclic aromatic hydrocarbon A polycyclic aromatic hydrocarbon (PAH) is a class of organic compounds that is composed of multiple aromatic rings. The simplest representative is naphthalene, having two aromatic rings and the three-ring compounds anthracene and phenanthrene. ...
(PAHs) and
carbon tetrachloride Carbon tetrachloride, also known by many other names (such as tetrachloromethane, also IUPAC nomenclature of inorganic chemistry, recognised by the IUPAC, carbon tet in the cleaning industry, Halon-104 in firefighting, and Refrigerant-10 in HVAC ...
(CCl4). The process of toxicodynamics can be useful for application in environmental
risk assessment Broadly speaking, a risk assessment is the combined effort of: # identifying and analyzing potential (future) events that may negatively impact individuals, assets, and/or the environment (i.e. hazard analysis); and # making judgments "on the to ...
by implementing toxicokinetic-toxicodynamic (TKTD) models. TKTD models include phenomenas such as time-varying exposure, carry-over
toxicity Toxicity is the degree to which a chemical substance or a particular mixture of substances can damage an organism. Toxicity can refer to the effect on a whole organism, such as an animal, bacterium, or plant, as well as the effect on a subst ...
, organism recovery time, effects of mixtures, and extrapolation to untested
chemicals A chemical substance is a form of matter having constant chemical composition and characteristic properties. Some references add that chemical substance cannot be separated into its constituent elements by physical separation methods, i.e., wit ...
and
species In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate s ...
. Due to their advantages, these types of models may be more applicable for risk assessment than traditional modeling approaches.


Overview

While
toxicokinetics Toxicokinetics (often abbreviated as 'TK') is the description of both what rate a chemical will enter the body and what occurs to excrete and metabolize the compound once it is in the body. Relation to Pharmacokinetics It is an application of pha ...
describes the changes in the concentrations of a toxicant over time due to the uptake,
biotransformation Biotransformation is the biochemical modification of one chemical compound or a mixture of chemical compounds. Biotransformations can be conducted with whole cells, their lysates, or purified enzymes. Increasingly, biotransformations are effected w ...
, distribution and elimination of toxicants, toxicodynamics involves the interactions of a toxicant with a
biological target A biological target is anything within a living organism to which some other entity (like an endogenous ligand or a drug) is directed and/or binds, resulting in a change in its behavior or function. Examples of common classes of biological targets ...
and the functional or structural alterations in a cell that can eventually lead to a toxic effect. Depending on the toxicant’s chemical reactivity and vicinity, the toxicant may be able to interact with the biological target. Interactions between a toxicant and the biological target may also be more specific, where high-affinity
binding site In biochemistry and molecular biology, a binding site is a region on a macromolecule such as a protein that binds to another molecule with specificity. The binding partner of the macromolecule is often referred to as a ligand. Ligands may inclu ...
s increase the selectivity of interactions. For this reason, toxicity may be expressed primarily in certain tissues or
organs In biology, an organ is a collection of tissues joined in a structural unit to serve a common function. In the hierarchy of life, an organ lies between tissue and an organ system. Tissues are formed from same type cells to act together in a f ...
. The targets are often receptors on the cell surface or in the
cytoplasm In cell biology, the cytoplasm is all of the material within a eukaryotic cell, enclosed by the cell membrane, except for the cell nucleus. The material inside the nucleus and contained within the nuclear membrane is termed the nucleoplasm. The ...
and
nucleus Nucleus ( : nuclei) is a Latin word for the seed inside a fruit. It most often refers to: *Atomic nucleus, the very dense central region of an atom *Cell nucleus, a central organelle of a eukaryotic cell, containing most of the cell's DNA Nucle ...
. Toxicants can either induce an unnecessary response or inhibit a natural response, which can cause damage. If the biological target is critical and the damage is severe enough, irreversible injury can occur first at the molecular level, which will translate into effects at higher levels of organization.


Endocrine disruptors

EDCs are generally considered to be toxicants that either mimic or block the transcriptional activation normally caused by natural steroid hormones.Tabb and Blumberg, 2006 These chemicals include those acting on androgen receptors, estrogen receptors and thyroid hormone receptors.


Effects of endocrine disruptors

Endocrine disrupting chemicals can interfere with the
endocrine system The endocrine system is a messenger system comprising feedback loops of the hormones released by internal glands of an organism directly into the circulatory system, regulating distant target organs. In vertebrates, the hypothalamus is the neu ...
in a number of ways including hormone synthesis, storage/release, transport and clearance, receptor recognition and binding, and postreceptor activation.Choi et al., 2010 In wildlife, exposure to EDCs can result in altered fertility, reduced viability of offspring, impaired hormone secretion or activity and modified reproductive anatomy.Guillette et al., 2000 The reproductive anatomy of offspring can particularly be affected if maternal exposure occurs.Colborn et al., 1993 In females, this includes
mammary gland A mammary gland is an exocrine gland in humans and other mammals that produces milk to feed young offspring. Mammals get their name from the Latin word ''mamma'', "breast". The mammary glands are arranged in organs such as the breasts in primat ...
s,
fallopian tube The fallopian tubes, also known as uterine tubes, oviducts or salpinges (singular salpinx), are paired tubes in the human female that stretch from the uterus to the ovaries. The fallopian tubes are part of the female reproductive system. In ot ...
s,
uterus The uterus (from Latin ''uterus'', plural ''uteri'') or womb () is the organ in the reproductive system of most female mammals, including humans that accommodates the embryonic and fetal development of one or more embryos until birth. The uter ...
,
cervix The cervix or cervix uteri (Latin, 'neck of the uterus') is the lower part of the uterus (womb) in the human female reproductive system. The cervix is usually 2 to 3 cm long (~1 inch) and roughly cylindrical in shape, which changes during ...
, and
vagina In mammals, the vagina is the elastic, muscular part of the female genital tract. In humans, it extends from the vestibule to the cervix. The outer vaginal opening is normally partly covered by a thin layer of mucosal tissue called the hymen ...
. In males, this includes the
prostate The prostate is both an Male accessory gland, accessory gland of the male reproductive system and a muscle-driven mechanical switch between urination and ejaculation. It is found only in some mammals. It differs between species anatomically, ...
,
seminal vesicle The seminal vesicles (also called vesicular glands, or seminal glands) are a pair of two convoluted tubular glands that lie behind the urinary bladder of some male mammals. They secrete fluid that partly composes the semen. The vesicles are 5 ...
s,
epididymitis Epididymitis is a medical condition characterized by inflammation of the epididymis, a curved structure at the back of the testicle. Onset of pain is typically over a day or two. The pain may improve with raising the testicle. Other symptoms may ...
and
testes A testicle or testis (plural testes) is the male reproductive gland or gonad in all bilaterians, including humans. It is homologous to the female ovary. The functions of the testes are to produce both sperm and androgens, primarily testoster ...
. Exposure of fish to EDCs has also been associated with abnormal thyroid function, decreased fertility, decreased hatching success, de-feminization and masculinization of female fish and alteration of
immune function The immune system is a network of biological processes that protects an organism from diseases. It detects and responds to a wide variety of pathogens, from viruses to parasitic worms, as well as cancer cells and objects such as wood splinte ...
. Endocrine disruption as a
mode of action A mode of action (MoA) describes a functional or anatomical change, resulting from the exposure of a living organism to a substance. In comparison, a mechanism of action (MOA) describes such changes at the molecular level. A mode of action is impor ...
for
xenobiotic A xenobiotic is a chemical substance found within an organism that is not naturally produced or expected to be present within the organism. It can also cover substances that are present in much higher concentrations than are usual. Natural compo ...
s was brought into awareness by Our Stolen Future by Theo Colborn. Endocrine disrupting chemicals are known to accumulate in body tissue and are highly persistent in the environment. Many toxicants are known EDCs including
pesticide Pesticides are substances that are meant to control pests. This includes herbicide, insecticide, nematicide, molluscicide, piscicide, avicide, rodenticide, bactericide, insect repellent, animal repellent, microbicide, fungicide, and lampri ...
s,
phthalate Phthalates (, ), or phthalate esters, are esters of phthalic acid. They are mainly used as plasticizers, i.e., substances added to plastics to increase their flexibility, transparency, durability, and longevity. They are used primarily to soften ...
s,
phytoestrogens A phytoestrogen is a plant-derived xenoestrogen (see estrogen) not generated within the endocrine system, but consumed by eating plants or manufactured foods. Also called a "dietary estrogen", it is a diverse group of naturally occurring nonstero ...
, some industrial/commercial products, and
pharmaceuticals A medication (also called medicament, medicine, pharmaceutical drug, medicinal drug or simply drug) is a drug used to diagnose, cure, treat, or prevent disease. Drug therapy (pharmacotherapy) is an important part of the medical field and rel ...
. These chemicals are known to cause endocrine disruption via a few different mechanisms. While the mechanism associated with the thyroid hormone receptor is not well understood, two more established mechanisms involve the inhibition of the androgen receptor and activation of the estrogen receptor.


Androgen-receptor mediated

Certain toxicants act as endocrine disruptors by interacting with the androgen receptor. DDE is one example of a chemical that acts via this mechanism. DDE is a
metabolite In biochemistry, a metabolite is an intermediate or end product of metabolism. The term is usually used for small molecules. Metabolites have various functions, including fuel, structure, signaling, stimulatory and inhibitory effects on enzymes, c ...
of
DDT Dichlorodiphenyltrichloroethane, commonly known as DDT, is a colorless, tasteless, and almost odorless crystalline chemical compound, an organochloride. Originally developed as an insecticide, it became infamous for its environmental impacts. ...
that is widespread in the environment. Although production of DDT has been banned in the Western world, this chemical is extremely persistent and is still commonly found in the environment along with its metabolite DDE. DDE is an
antiandrogen Antiandrogens, also known as androgen antagonists or testosterone blockers, are a class of drugs that prevent androgens like testosterone and dihydrotestosterone (DHT) from mediating their biological effects in the body. They act by blocking the ...
, which means it alters the expression of specific androgen-regulated genes, and is an androgen receptor (AR)-mediated mechanism. DDE is a
lipophilic Lipophilicity (from Greek λίπος "fat" and φίλος "friendly"), refers to the ability of a chemical compound to dissolve in fats, oils, lipids, and non-polar solvents such as hexane or toluene. Such non-polar solvents are themselves lipop ...
compound which diffuses into the cell and binds to the AR. Through binding, the receptor is inactivated and cannot bind to the androgen response element on DNA. This inhibits the transcription of androgen-responsive genes which can have serious consequences for exposed wildlife. In 1980, there was a spill in
Lake Apopka Lake Apopka is the fourth largest lake in the U.S. state of Florida. It is located northwest of Orlando, mostly within the bounds of Orange County, although the western part is in Lake County. Fed by a natural spring, rainfall and stormw ...
, Florida which released the pesticide dicofol and DDT along with its metabolites. The neonatal and juvenile alligators present in this lake have been extensively studied and observed to have altered
plasma Plasma or plasm may refer to: Science * Plasma (physics), one of the four fundamental states of matter * Plasma (mineral), a green translucent silica mineral * Quark–gluon plasma, a state of matter in quantum chromodynamics Biology * Blood pla ...
hormone concentrations, decreased clutch viability, increased juvenile mortality, and morphological abnormalities in the testis and ovary.


Estrogen-receptor mediated

Toxicants may also cause endocrine disruption through interacting with the estrogen receptor. This mechanism has been well-studied with PCBs. These chemicals have been used as coolants and lubricants in transformers and other electrical equipment due to their insulating properties.ATSDR A purely
anthropogenic Anthropogenic ("human" + "generating") is an adjective that may refer to: * Anthropogeny, the study of the origins of humanity Counterintuitively, anthropogenic may also refer to things that have been generated by humans, as follows: * Human im ...
substance, PCBs are no longer in production in the United States due to the adverse health effects associated with exposure, but they are highly persistent and are still widespread in the environment. PCBs are a
xenoestrogen Xenoestrogens are a type of xenohormone that imitates estrogen. They can be either synthetic or natural chemical compounds. Synthetic xenoestrogens include some widely used industrial compounds, such as PCBs, BPA, and phthalates, which have estro ...
, which elicit an enhancing (rather than inhibiting) response, and are mediated by the estrogen receptor. These are often referred to as estrogen mimics because they mimic the effects of estrogen. PCBs often build up in sediments and
bioaccumulate Bioaccumulation is the gradual accumulation of substances, such as pesticides or other chemicals, in an organism. Bioaccumulation occurs when an organism absorbs a substance at a rate faster than that at which the substance is lost or eliminated ...
in organisms. These chemicals diffuse into the nucleus and bind to the estrogen receptor. The estrogen receptor is kept in an inactive conformation through interactions with proteins such as
heat shock protein Heat shock proteins (HSP) are a family of proteins produced by cells in response to exposure to stressful conditions. They were first described in relation to heat shock, but are now known to also be expressed during other stresses including expo ...
s 59, 70, and 90.Pait, 2002 After the toxicant binding occurs, the estrogen receptor is activated and forms a
homodimer In biochemistry, a protein dimer is a macromolecular complex formed by two protein monomers, or single proteins, which are usually non-covalently bound. Many macromolecules, such as proteins or nucleic acids, form dimers. The word ''dimer'' ha ...
complex which seeks out estrogen response elements in the DNA. The binding of the complex to these elements causes a rearrangement of the
chromatin Chromatin is a complex of DNA and protein found in eukaryotic cells. The primary function is to package long DNA molecules into more compact, denser structures. This prevents the strands from becoming tangled and also plays important roles in r ...
and transcription of the gene, resulting in production of a specific protein. In doing this, PCBs elicit an estrogenic response which can affect numerous functions within the organism. These effects are observed in various aquatic species. The levels of PCBs in marine mammals are often very high as a result of bioaccumulation.Perrin, 2009 Studies have demonstrated that PCBs are responsible for reproductive impairment in the
harbor seal The harbor (or harbour) seal (''Phoca vitulina''), also known as the common seal, is a true seal found along temperate and Arctic marine coastlines of the Northern Hemisphere. The most widely distributed species of pinniped (walruses, eared sea ...
(''Phoca vitulina''). Similar effects have been found in the
grey seal The grey seal (''Halichoerus grypus'') is found on both shores of the North Atlantic Ocean. In Latin Halichoerus grypus means "hook-nosed sea pig". It is a large seal of the family Phocidae, which are commonly referred to as "true seals" or " ...
(''Halichoerus grypus''), the
ringed seal The ringed seal (''Pusa hispida'') is an earless seal inhabiting the Arctic and sub-Arctic regions. The ringed seal is a relatively small seal, rarely greater than 1.5 m in length, with a distinctive patterning of dark spots surrounded by light g ...
(''Pusa hispida'') and the
California sea lion The California sea lion (''Zalophus californianus'') is a coastal eared seal native to western North America. It is one of six species of sea lions. Its natural habitat ranges from southeast Alaska to central Mexico, including the Gulf of C ...
(''Zalophys californianus''). In the grey seals and ringed seals, uterine occlusions and
stenosis A stenosis (from Ancient Greek στενός, "narrow") is an abnormal narrowing in a blood vessel or other tubular organ or structure such as foramina and canals. It is also sometimes called a stricture (as in urethral stricture). ''Stricture'' ...
were found which led to sterility. If exposed to a xenoestrogen such as PCBs, male fish have also been seen to produce
vitellogenin Vitellogenin (VTG or less popularly known as VG) (from Latin ''vitellus'', yolk, and ''genero'', I produce) is a precursor of egg yolk that transports protein and some lipid from the liver through the blood to the growing oocytes where it becomes ...
. Vitellogenin is an egg protein female fish normally produce but is not usually present in males except at very low concentrations. This is often used as a
biomarker In biomedical contexts, a biomarker, or biological marker, is a measurable indicator of some biological state or condition. Biomarkers are often measured and evaluated using blood, urine, or soft tissues to examine normal biological processes, ...
for EDCs.


Carcinogens

Carcinogen A carcinogen is any substance, radionuclide, or radiation that promotes carcinogenesis (the formation of cancer). This may be due to the ability to damage the genome or to the disruption of cellular metabolic processes. Several radioactive substan ...
s are defined as any substance that causes
cancer Cancer is a group of diseases involving abnormal cell growth with the potential to invade or spread to other parts of the body. These contrast with benign tumors, which do not spread. Possible signs and symptoms include a lump, abnormal b ...
. The toxicodynamics of carcinogens can be complex due to the varying mechanisms of action for different carcinogenic toxicants. Because of their complex nature, carcinogens are classified as either genotoxic or nongenotoxic carcinogens.


Effects of carcinogens

The effects of carcinogens are most often related to human exposures but mammals are not the only species that can be affected by cancer-causing toxicants.Rand, 1995 Many studies have shown that cancer can develop in fish species as well.
Neoplasm A neoplasm () is a type of abnormal and excessive growth of tissue. The process that occurs to form or produce a neoplasm is called neoplasia. The growth of a neoplasm is uncoordinated with that of the normal surrounding tissue, and persists ...
s occurring in
epithelial tissue Epithelium or epithelial tissue is one of the four basic types of animal tissue, along with connective tissue, muscle tissue and nervous tissue. It is a thin, continuous, protective layer of compactly packed cells with a little intercellu ...
such as the
liver The liver is a major Organ (anatomy), organ only found in vertebrates which performs many essential biological functions such as detoxification of the organism, and the Protein biosynthesis, synthesis of proteins and biochemicals necessary for ...
, gastrointestinal tract, and the
pancreas The pancreas is an organ of the digestive system and endocrine system of vertebrates. In humans, it is located in the abdomen behind the stomach and functions as a gland. The pancreas is a mixed or heterocrine gland, i.e. it has both an end ...
have been linked to various environmental toxicants. Carcinogens preferentially target the liver in fish and develop hepatocellular and biliary lesions.


Genotoxic carcinogens

Genotoxic carcinogens interact directly with DNA and genetic material or indirectly by their reactive metabolites.VanDelft et al., 2004 Toxicants such as PAHs can be genotoxic carcinogens to aquatic organisms.Newman, 2010 PAHs are widely spread throughout the environment through the incomplete burning of coal, wood, or petroleum products. Although PAHs do not bioaccumulate in vertebrate tissue, many studies have confirmed that certain PAH compounds such as
benzo(a)pyrene Benzo 'a''yrene (B''a''P or B ) is a polycyclic aromatic hydrocarbon and the result of incomplete combustion of organic matter at temperatures between and . The ubiquitous compound can be found in coal tar, tobacco smoke and many foods, espec ...
,
benz(a)anthracene Benz 'a''nthracene or benzo 'a''nthracene is a polycyclic aromatic hydrocarbon with the chemical formula C18H12. It is produced during incomplete combustion of organic matter. Benz 'a''nthracene is one of carcinogenic constituents of t ...
, and Benzofluoranthene, are
bioavailable In pharmacology, bioavailability is a subcategory of absorption and is the fraction (%) of an administered drug that reaches the systemic circulation. By definition, when a medication is administered intravenously, its bioavailability is 100%. Ho ...
and responsible for liver
disease A disease is a particular abnormal condition that negatively affects the structure or function of all or part of an organism, and that is not immediately due to any external injury. Diseases are often known to be medical conditions that a ...
s like cancer in wild fish populations. One mechanism of action for genotoxic carcinogens includes the formation of
DNA adduct In molecular genetics, a DNA adduct is a segment of DNA bound to a cancer-causing chemical. This process could lead to the development of cancerous cells, or carcinogenesis. DNA adducts in scientific experiments are used as biomarkers of exposur ...
s. Once the PAH compound enters an organism, it becomes
metabolized Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
and available for biotransformation. The
biotransformation Biotransformation is the biochemical modification of one chemical compound or a mixture of chemical compounds. Biotransformations can be conducted with whole cells, their lysates, or purified enzymes. Increasingly, biotransformations are effected w ...
process can activate the PAH compound and transform it into a diol epoxide, which is a very
reactive intermediate In chemistry, a reactive intermediate or an intermediate is a short-lived, high-energy, highly reactive molecule. When generated in a chemical reaction, it will quickly convert into a more stable molecule. Only in exceptional cases can these comp ...
. These diol-epoxides covalently bind with DNA
base pair A base pair (bp) is a fundamental unit of double-stranded nucleic acids consisting of two nucleobases bound to each other by hydrogen bonds. They form the building blocks of the DNA double helix and contribute to the folded structure of both DNA ...
s, most often with
guanine Guanine () ( symbol G or Gua) is one of the four main nucleobases found in the nucleic acids DNA and RNA, the others being adenine, cytosine, and thymine (uracil in RNA). In DNA, guanine is paired with cytosine. The guanine nucleoside is called ...
and
adenine Adenine () ( symbol A or Ade) is a nucleobase (a purine derivative). It is one of the four nucleobases in the nucleic acid of DNA that are represented by the letters G–C–A–T. The three others are guanine, cytosine and thymine. Its derivati ...
to form stable adducts within the DNA structure. The binding of diol epoxides and DNA base pairs blocks
polymerase A polymerase is an enzyme ( EC 2.7.7.6/7/19/48/49) that synthesizes long chains of polymers or nucleic acids. DNA polymerase and RNA polymerase are used to assemble DNA and RNA molecules, respectively, by copying a DNA template strand using base- ...
replication activity. This blockage ultimately contributes to an increase in DNA damage by reducing repair activity. Due to these processes, PAH compounds are thought to play a role in the initiation and early promotion stage of
carcinogenesis Carcinogenesis, also called oncogenesis or tumorigenesis, is the formation of a cancer, whereby normal cells are transformed into cancer cells. The process is characterized by changes at the cellular, genetic, and epigenetic levels and abnor ...
. Fish exposed to PAHs develop a range of liver
lesion A lesion is any damage or abnormal change in the tissue of an organism, usually caused by disease or trauma. ''Lesion'' is derived from the Latin "injury". Lesions may occur in plants as well as animals. Types There is no designated classifi ...
s, some of which are characteristic of hepatocarcinogenicity.


Nongenotoxic carcinogens

Nongenotoxic, or
epigenetic In biology, epigenetics is the study of stable phenotypic changes (known as ''marks'') that do not involve alterations in the DNA sequence. The Greek prefix '' epi-'' ( "over, outside of, around") in ''epigenetics'' implies features that are "o ...
carcinogens are different and slightly more ambiguous than genotoxic carcinogens since they are not directly carcinogenic. Nongenotoxic carcinogens act by secondary mechanisms that do not directly damage genes. This type of carcinogenesis does not change the sequence of DNA; instead it alters the expression or repression of certain genes by a wide variety of cellular processes. Since these toxicants do not directly act on DNA, little is known about the mechanistic pathway. It has been proposed that modification of gene expression from nongenotoxic carcinogens can occur by
oxidative stress Oxidative stress reflects an imbalance between the systemic manifestation of reactive oxygen species and a biological system's ability to readily Detoxification, detoxify the reactive intermediates or to repair the resulting damage. Disturbances ...
, peroxisome proliferation, suppression of
apoptosis Apoptosis (from grc, ἀπόπτωσις, apóptōsis, 'falling off') is a form of programmed cell death that occurs in multicellular organisms. Biochemical events lead to characteristic cell changes (morphology) and death. These changes incl ...
, alteration of intercellular communication, and modulation of metabolizing enzymes.
Carbon tetrachloride Carbon tetrachloride, also known by many other names (such as tetrachloromethane, also IUPAC nomenclature of inorganic chemistry, recognised by the IUPAC, carbon tet in the cleaning industry, Halon-104 in firefighting, and Refrigerant-10 in HVAC ...
is an example of a probable nongenotoxic carcinogen to aquatic vertebrates. Historically, carbon tetrachloride has been used in pharmaceutical production, petroleum refining, and as an industrial solvent.National Toxicology Program, 2011 Due to its widespread industrial use and release into the environment, carbon tetrachloride has been found in drinking water and therefore, has become a concern for aquatic organisms.Rabergh and Lipsky, 1997 Because of its high
hepatotoxic Hepatotoxicity (from ''hepatic toxicity'') implies chemical-driven liver damage. Drug-induced liver injury is a cause of acute and chronic liver disease caused specifically by medications and the most common reason for a drug to be withdrawn fro ...
properties, carbon tetrachloride could potentially be linked to liver cancer. Experimental cancer studies have shown that carbon tetrachloride may cause
benign Malignancy () is the tendency of a medical condition to become progressively worse. Malignancy is most familiar as a characterization of cancer. A ''malignant'' tumor contrasts with a non-cancerous benign tumor, ''benign'' tumor in that a malign ...
and
malignant Malignancy () is the tendency of a medical condition to become progressively worse. Malignancy is most familiar as a characterization of cancer. A ''malignant'' tumor contrasts with a non-cancerous ''benign'' tumor in that a malignancy is not s ...
liver
tumor A neoplasm () is a type of abnormal and excessive growth of tissue. The process that occurs to form or produce a neoplasm is called neoplasia. The growth of a neoplasm is uncoordinated with that of the normal surrounding tissue, and persists ...
s to
rainbow trout The rainbow trout (''Oncorhynchus mykiss'') is a species of trout native to cold-water tributaries of the Pacific Ocean in Asia and North America. The steelhead (sometimes called "steelhead trout") is an anadromous (sea-run) form of the coasta ...
. carbon tetrachloride works as a nongenotoxic carcinogen by formulating
free radicals In chemistry, a radical, also known as a free radical, is an atom, molecule, or ion that has at least one unpaired valence electron. With some exceptions, these unpaired electrons make radicals highly chemically reactive. Many radicals spont ...
which induce oxidative stress. It has been proposed that once carbon tetrachloride enters the organism, it is metabolized to trichloromethyl and trichloromethyl peroxy radicals by the
CYP2E1 Cytochrome P450 2E1 (abbreviated CYP2E1, ) is a member of the cytochrome P450 mixed-function oxidase system, which is involved in the metabolism of xenobiotics in the body. This class of enzymes is divided up into a number of subcategories, includ ...
enzyme Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrates, and the enzyme converts the substrates into different molecules known as products. A ...
.Manibusan and Eastmond, 2007 The more reactive radical, trichloromethyl peroxy, can attack
polyunsaturated fatty acid Polyunsaturated fatty acids (PUFAs) are fatty acids that contain more than one double bond in their backbone. This class includes many important compounds, such as essential fatty acids and those that give drying oils their characteristic proper ...
s in the
cellular membrane The cell membrane (also known as the plasma membrane (PM) or cytoplasmic membrane, and historically referred to as the plasmalemma) is a biological membrane that separates and protects the interior of all cells from the outside environment (t ...
to form
fatty acid In chemistry, particularly in biochemistry, a fatty acid is a carboxylic acid with an aliphatic chain, which is either saturated or unsaturated. Most naturally occurring fatty acids have an unbranched chain of an even number of carbon atoms, fr ...
free radicals and initiate
lipid peroxidation Lipid peroxidation is the chain of reactions of oxidative degradation of lipids. It is the process in which radical (chemistry), free radicals "steal" electrons from the lipids in cell membranes, resulting in cell damage. This process proceeds by ...
. The attack on the cellular membrane increases its permeability, causing a leakage of enzymes and disrupts cellular calcium
homeostasis In biology, homeostasis (British English, British also homoeostasis) Help:IPA/English, (/hɒmɪə(ʊ)ˈsteɪsɪs/) is the state of steady internal, physics, physical, and chemistry, chemical conditions maintained by organism, living systems. Thi ...
. This loss of calcium homeostasis activates calcium dependent
degradative enzyme A degradative enzyme is an enzyme (in a broader sense a protein) which degrades biological molecules. Some examples of degradative enzymes: *Lipase, which digests lipids, *Carbohydrases, which digest carbohydrates (e.g., sugars), *Proteases, which d ...
s and
cytotoxicity Cytotoxicity is the quality of being toxic to cells. Examples of toxic agents are an immune cell or some types of venom, e.g. from the puff adder (''Bitis arietans'') or brown recluse spider (''Loxosceles reclusa''). Cell physiology Treating cells ...
, causing hepatic damage. The regenerative and proliferative changes that occur in the liver during this time could increase the frequency of genetic damage, resulting in a possible increase of cancer.


Applications

Toxicodynamics can be used in combination with
toxicokinetics Toxicokinetics (often abbreviated as 'TK') is the description of both what rate a chemical will enter the body and what occurs to excrete and metabolize the compound once it is in the body. Relation to Pharmacokinetics It is an application of pha ...
in
environmental risk assessment Environmental Impact assessment (EIA) is the assessment of the environmental consequences of a plan, policy, program, or actual projects prior to the decision to move forward with the proposed action. In this context, the term "environmental imp ...
to determine the potential effects of releasing a toxicant into the environment. The most widely used method of incorporating this are TKTD models.


Setup of TKTD models

Both toxicokinetics and toxicodynamics have now been described, and using these definitions models were formed, where the internal concentration (TK) and damage (TD) are
simulated A simulation is the imitation of the operation of a real-world process or system over time. Simulations require the use of models; the model represents the key characteristics or behaviors of the selected system or process, whereas the s ...
in response to exposure. TK and TD are separated in the model to allow for the identification of properties of toxicants that determine TK and those that determine TD. To use this type of model,
parameter A parameter (), generally, is any characteristic that can help in defining or classifying a particular system (meaning an event, project, object, situation, etc.). That is, a parameter is an element of a system that is useful, or critical, when ...
values for TK processes need to be obtained first. Second, the TD parameters need to be estimated. Both of these steps require a large database of toxicity information for
parameterization In mathematics, and more specifically in geometry, parametrization (or parameterization; also parameterisation, parametrisation) is the process of finding parametric equations of a curve, a surface, or, more generally, a manifold or a variety, de ...
. After establishing all the parameter values for the TKTD model, and using basic scientific precautions, the model can be used to predict toxic effects, calculate recovery times for organisms, or establish extrapolations from the model to toxicity of untested toxicants and species.Ashauer and Escher 2010


History of TKTD models

It has been argued that the current challenges facing risk assessments can be addressed with TKTD modeling. TKTD models were derived in response to a couple of factors. One is the lack of time being considered as a factor in toxicity and risk assessment. Some of the earliest developed TKTD models, such as the Critical Body Residue (CBR) model and Critical Target Occupation (CTO) model, have considered time as a factor but a criticism has been that they are for very specific circumstances such as reversibly acting toxicants or irreversibly acting toxicants. Further extrapolation of the CTO and CBR models are
DEBtox The DEBtox method for the evaluation of effects of toxicants makes use of the Dynamic Energy Budget (DEB) theory to quantify the effect. See the Organisation for Economic Co-operation and Development (OECD) report, below, for a description of the ...
, which can model sublethal endpoints, and hazard versions of the CTO, which takes into account
stochastic Stochastic (, ) refers to the property of being well described by a random probability distribution. Although stochasticity and randomness are distinct in that the former refers to a modeling approach and the latter refers to phenomena themselv ...
death as opposed to individual tolerance.Jager et al. 2011 Another significant step to developing TKTD models was the incorporation of a
state variable A state variable is one of the set of variables that are used to describe the mathematical "state" of a dynamical system. Intuitively, the state of a system describes enough about the system to determine its future behaviour in the absence of a ...
for damage. By using damage as a toxicodynamic state-variable, modeling intermediate recovery rates can be accomplished for toxicants that act reversibly with their targets, without the assumptions of instant recovery (CBR model) or irreversible interactions (CTO model). TKTD models that incorporate damage are the Damage Assessment Model (DAM) and the Threshold Damage Model (TDM). For what may seem like straightforward endpoints, a variety of different TKTD approaches exist. A review of the assumptions and
hypotheses A hypothesis (plural hypotheses) is a proposed explanation for a phenomenon. For a hypothesis to be a scientific hypothesis, the scientific method requires that one can test it. Scientists generally base scientific hypotheses on previous obser ...
of each was previously published in the creation of a general unified threshold model of survival (GUTS).


Advantages for risk assessment

As referenced above, TKTD models have several advantages to traditional models for risk assessments. The principal advantages to using TKTD models are: * The consequences of time-varying or repeated exposures can be explained and simulated by the TKTD model. * Carry-over toxicity as well as delayed effects can be simulated, whether the carry-over toxicity is due to TK or TD or both. In this way, TKTD models can quantify risks from pulsed or fluctuating exposures. * Organism recovery time depends on the time course of TK and TD, which makes the TKTD models suitable for calculating organism recovery time. * TKTD models have the potential to predict effects of mixtures, including both environmental and chemical stressors and also be used as mechanism-based extrapolation to untested toxicants or untested species.Goussen et al, 2020 * Linking TKTD models with Individual Based Models (IBM) may improve risk assessment of toxicants by simulating temporal aspects as well as
ecological Ecology () is the study of the relationships between living organisms, including humans, and their physical environment. Ecology considers organisms at the individual, population, community, ecosystem, and biosphere level. Ecology overlaps wi ...
aspects. Due to its advantages, TKTD models may be more powerful than the traditional dose-response models because of their incorporation of chemical
concentration In chemistry, concentration is the abundance of a constituent divided by the total volume of a mixture. Several types of mathematical description can be distinguished: '' mass concentration'', ''molar concentration'', ''number concentration'', an ...
s as well as temporal dimensions. Toxicodynamic modeling (such as TKTD models) has been shown to be a useful tool for toxicological research, with increasing opportunities to use these results in risk assessment to permit a more scientifically based risk assessment that is less reliable on
animal testing Animal testing, also known as animal experimentation, animal research, and ''in vivo'' testing, is the use of non-human animals in experiments that seek to control the variables that affect the behavior or biological system under study. This ...
.Blaauboer 2003 Overall, these types of models can formalize knowledge about the toxicity of toxicants and organism sensitivity, create new hypotheses, and simulate temporal aspects of toxicity, making them useful tools for risk assessment.


See also

*
Ecotoxicology Ecotoxicology is the study of the effects of toxic chemicals on biological organisms, especially at the population, community, ecosystem, and biosphere levels. Ecotoxicology is a multidisciplinary field, which integrates toxicology and ecology. ...


Notes


References

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