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Soil, also commonly referred to as earth or dirt, is a
mixture In chemistry, a mixture is a material made up of two or more different chemical substances which are not chemically bonded. A mixture is the physical combination of two or more substances in which the identities are retained and are mixed in the ...
of
organic matter Organic matter, organic material, or natural organic matter refers to the large source of carbon-based compounds found within natural and engineered, terrestrial, and aquatic environments. It is matter composed of organic compounds that have c ...
, minerals, gases,
liquid A liquid is a nearly incompressible fluid that conforms to the shape of its container but retains a (nearly) constant volume independent of pressure. As such, it is one of the four fundamental states of matter (the others being solid, gas, a ...
s, and organisms that together support life. Some scientific definitions distinguish ''dirt'' from ''soil'' by restricting the former term specifically to displaced soil. Soil consists of a solid phase of minerals and organic matter (the soil matrix), as well as a porous phase that holds gases (the soil atmosphere) and water (the soil solution). Accordingly, soil is a three- state system of solids, liquids, and gases. Soil is a product of several factors: the influence of climate, relief (elevation, orientation, and slope of terrain), organisms, and the soil's parent materials (original minerals) interacting over time. It continually undergoes development by way of numerous physical, chemical and biological processes, which include weathering with associated erosion. Given its complexity and strong internal connectedness, soil ecologists regard soil as an ecosystem. Most soils have a dry bulk density (density of soil taking into account voids when dry) between 1.1 and 1.6 g/cm3, though the soil particle density is much higher, in the range of 2.6 to 2.7 g/cm3. Little of the soil of planet Earth is older than the Pleistocene and none is older than the
Cenozoic The Cenozoic ( ; ) is Earth's current geological era, representing the last 66million years of Earth's history. It is characterised by the dominance of mammals, birds and flowering plants, a cooling and drying climate, and the current configura ...
, although fossilized soils are preserved from as far back as the Archean. The pedosphere interfaces with the
lithosphere A lithosphere () is the rigid, outermost rocky shell of a terrestrial planet or natural satellite. On Earth, it is composed of the crust (geology), crust and the portion of the upper mantle (geology), mantle that behaves elastically on time sca ...
, the hydrosphere, the
atmosphere An atmosphere () is a layer of gas or layers of gases that envelop a planet, and is held in place by the gravity of the planetary body. A planet retains an atmosphere when the gravity is great and the temperature of the atmosphere is low. A s ...
, and the biosphere. Collectively, Earth's body of soil, called the pedosphere, has four important functions: * as a medium for plant growth * as a means of water storage, supply and purification * as a modifier of Earth's atmosphere * as a habitat for organisms All of these functions, in their turn, modify the soil and its properties. Soil science has two basic branches of study: edaphology and pedology. ''Edaphology'' studies the influence of soils on living things. ''Pedology'' focuses on the formation, description (morphology), and classification of soils in their natural environment. In engineering terms, soil is included in the broader concept of regolith, which also includes other loose material that lies above the bedrock, as can be found on the Moon and other celestial objects.


Processes

Soil is a major component of the Earth's ecosystem. The world's ecosystems are impacted in far-reaching ways by the processes carried out in the soil, with effects ranging from
ozone depletion Ozone depletion consists of two related events observed since the late 1970s: a steady lowering of about four percent in the total amount of ozone in Earth's atmosphere, and a much larger springtime decrease in stratospheric ozone (the ozone l ...
and global warming to rainforest destruction and water pollution. With respect to Earth's carbon cycle, soil acts as an important
carbon reservoir The carbon cycle is the biogeochemical cycle by which carbon is exchanged among the biosphere, pedosphere, geosphere, hydrosphere, and atmosphere of the Earth. Carbon is the main component of biological compounds as well as a major component ...
, and it is potentially one of the most reactive to human disturbance and climate change. As the planet warms, it has been predicted that soils will add carbon dioxide to the atmosphere due to increased
biological Biology is the scientific study of life. It is a natural science with a broad scope but has several unifying themes that tie it together as a single, coherent field. For instance, all organisms are made up of cells that process hereditary in ...
activity at higher temperatures, a positive feedback (amplification). This prediction has, however, been questioned on consideration of more recent knowledge on soil carbon turnover. Soil acts as an engineering medium, a habitat for soil organisms, a recycling system for nutrients and
organic waste Biodegradable waste includes any organic matter in waste which can be broken down into carbon dioxide, water, methane or simple organic molecules by micro-organisms and other living things by composting, aerobic digestion, anaerobic digestion ...
s, a regulator of water quality, a modifier of
atmospheric composition Atmospheric chemistry is a branch of atmospheric science in which the chemistry of the Earth's atmosphere and that of other planets is studied. It is a multidisciplinary approach of research and draws on environmental chemistry, physics, meteorol ...
, and a medium for plant growth, making it a critically important provider of ecosystem services. Since soil has a tremendous range of available niches and habitats, it contains a prominent part of the Earth's
genetic diversity Genetic diversity is the total number of genetic characteristics in the genetic makeup of a species, it ranges widely from the number of species to differences within species and can be attributed to the span of survival for a species. It is dis ...
. A gram of soil can contain billions of organisms, belonging to thousands of species, mostly microbial and largely still unexplored. Soil has a mean prokaryotic density of roughly 108 organisms per gram, whereas the ocean has no more than 107 prokaryotic organisms per milliliter (gram) of seawater. Organic carbon held in soil is eventually returned to the atmosphere through the process of respiration carried out by heterotrophic organisms, but a substantial part is retained in the soil in the form of soil organic matter; tillage usually increases the rate of
soil respiration Soil respiration refers to the production of carbon dioxide when soil organisms respire. This includes respiration of plant roots, the rhizosphere, microbes and fauna. Soil respiration is a key ecosystem process that releases carbon from the ...
, leading to the depletion of soil organic matter. Since plant roots need oxygen, aeration is an important characteristic of soil. This ventilation can be accomplished via networks of interconnected soil pores, which also absorb and hold rainwater making it readily available for uptake by plants. Since plants require a nearly continuous supply of water, but most regions receive sporadic rainfall, the water-holding capacity of soils is vital for plant survival. Soils can effectively remove impurities, kill disease agents, and degrade contaminants, this latter property being called
natural attenuation In physics, attenuation (in some contexts, extinction) is the gradual loss of flux intensity through a medium. For instance, dark glasses attenuate sunlight, lead attenuates X-rays, and water and air attenuate both light and sound at variable a ...
. Typically, soils maintain a net absorption of oxygen and methane and undergo a net release of carbon dioxide and nitrous oxide. Soils offer plants physical support, air, water, temperature moderation, nutrients, and protection from toxins. Soils provide readily available nutrients to plants and animals by converting dead organic matter into various nutrient forms.


Composition

A typical soil is about 50% solids (45% mineral and 5% organic matter), and 50% voids (or pores) of which half is occupied by water and half by gas. The percent soil mineral and organic content can be treated as a constant (in the short term), while the percent soil water and gas content is considered highly variable whereby a rise in one is simultaneously balanced by a reduction in the other. The pore space allows for the infiltration and movement of air and water, both of which are critical for life existing in soil.
Compaction Compaction may refer to: * Soil compaction, for mechanically induced compaction near the ground surface * Compaction of ceramic powders * Compaction (geology), part of the process of lithification involving mechanical dewatering of a sediment by ...
, a common problem with soils, reduces this space, preventing air and water from reaching plant roots and soil organisms. Given sufficient time, an undifferentiated soil will evolve a soil profile which consists of two or more layers, referred to as soil horizons. These differ in one or more properties such as in their texture,
structure A structure is an arrangement and organization of interrelated elements in a material object or system, or the object or system so organized. Material structures include man-made objects such as buildings and machines and natural objects such as ...
, density, porosity, consistency, temperature, color, and reactivity. The horizons differ greatly in thickness and generally lack sharp boundaries; their development is dependent on the type of parent material, the processes that modify those parent materials, and the soil-forming factors that influence those processes. The biological influences on soil properties are strongest near the surface, though the geochemical influences on soil properties increase with depth. Mature soil profiles typically include three basic master horizons: A, B, and C. The solum normally includes the A and B horizons. The living component of the soil is largely confined to the solum, and is generally more prominent in the A horizon. It has been suggested that the ''pedon'', a column of soil extending vertically from the surface to the underlying parent material and large enough to show the characteristics of all its horizons, could be subdivided in the ''humipedon'' (the living part, where most soil organisms are dwelling, corresponding to the ''humus form''), the ''copedon'' (in intermediary position, where most weathering of minerals takes place) and the ''lithopedon'' (in contact with the subsoil). The soil texture is determined by the relative proportions of the individual particles of sand, silt, and clay that make up the soil. The interaction of the individual mineral particles with organic matter, water, gases via
biotic Biotics describe living or once living components of a community; for example organisms, such as animals and plants. Biotic may refer to: *Life, the condition of living organisms *Biology, the study of life * Biotic material, which is derived from ...
and abiotic processes causes those particles to flocculate (stick together) to form aggregates or
ped Peds are aggregates of soil particles formed as a result of pedogenic processes; this natural organization of particles forms discrete units separated by pores or voids. The term is generally used for macroscopic (visible; i.e. greater than 1 mm i ...
s. Where these aggregates can be identified, a soil can be said to be developed, and can be described further in terms of color, porosity, consistency, reaction ( acidity), etc. Water is a critical agent in soil development due to its involvement in the dissolution, precipitation, erosion, transport, and deposition of the materials of which a soil is composed. The mixture of water and dissolved or suspended materials that occupy the soil pore space is called the soil solution. Since soil water is never pure water, but contains hundreds of dissolved organic and mineral substances, it may be more accurately called the soil solution. Water is central to the dissolution, precipitation and leaching of minerals from the soil profile. Finally, water affects the type of vegetation that grows in a soil, which in turn affects the development of the soil, a complex feedback which is exemplified in the dynamics of banded vegetation patterns in semi-arid regions. Soils supply plants with
nutrient A nutrient is a substance used by an organism to survive, grow, and reproduce. The requirement for dietary nutrient intake applies to animals, plants, fungi, and protists. Nutrients can be incorporated into cells for metabolic purposes or excret ...
s, most of which are held in place by particles of clay and organic matter (
colloid A colloid is a mixture in which one substance consisting of microscopically dispersed insoluble particles is suspended throughout another substance. Some definitions specify that the particles must be dispersed in a liquid, while others extend ...
s) The nutrients may be adsorbed on clay mineral surfaces, bound within clay minerals ( absorbed), or bound within organic compounds as part of the living organisms or dead soil organic matter. These bound nutrients interact with soil water to buffer the soil solution composition (attenuate changes in the soil solution) as soils wet up or dry out, as plants take up nutrients, as salts are leached, or as acids or alkalis are added. Plant nutrient availability is affected by
soil pH Soil pH is a measure of the acidity or basicity (alkalinity) of a soil. Soil pH is a key characteristic that can be used to make informative analysis both qualitative and quantitatively regarding soil characteristics. pH is defined as the neg ...
, which is a measure of the hydrogen ion activity in the soil solution. Soil pH is a function of many soil forming factors, and is generally lower (more acid) where weathering is more advanced. Most plant nutrients, with the exception of nitrogen, originate from the minerals that make up the soil parent material. Some nitrogen originates from rain as dilute nitric acid and ammonia, but most of the nitrogen is available in soils as a result of nitrogen fixation by bacteria. Once in the soil-plant system, most nutrients are recycled through living organisms, plant and microbial residues (soil organic matter), mineral-bound forms, and the soil solution. Both living soil organisms (microbes, animals and plant roots) and soil organic matter are of critical importance to this recycling, and thereby to soil formation and
soil fertility Soil fertility refers to the ability of soil to sustain agricultural plant growth, i.e. to provide plant habitat and result in sustained and consistent yields of high quality.
. Microbial
soil enzyme Soil enzymes are a group of enzymes found in soil. They are excreted by soil microbes such as fungi, bacteria and archaea, and play a key role in decomposing soil organic matter into humus, in the process releasing nutrients essential for the growt ...
s may release nutrients from minerals or organic matter for use by plants and other microorganisms, sequester (incorporate) them into living cells, or cause their loss from the soil by
volatilisation Volatilization is the process whereby a dissolved sample is vaporised. In atomic spectroscopy this is usually a two-step process. The analyte is turned into small droplets in a nebuliser which are entrained in a gas flow which is in turn volatilis ...
(loss to the atmosphere as gases) or leaching.


Formation

Soil is said to be formed when organic matter has accumulated and colloids are washed downward, leaving deposits of clay,
humus In classical soil science, humus is the dark organic matter in soil that is formed by the decomposition of plant and animal matter. It is a kind of soil organic matter. It is rich in nutrients and retains moisture in the soil. Humus is the Lati ...
,
iron oxide Iron oxides are chemical compounds composed of iron and oxygen. Several iron oxides are recognized. All are black magnetic solids. Often they are non-stoichiometric. Oxyhydroxides are a related class of compounds, perhaps the best known of whic ...
, carbonate, and gypsum, producing a distinct layer called the B horizon. This is a somewhat arbitrary definition as mixtures of sand, silt, clay and humus will support biological and agricultural activity before that time. These constituents are moved from one level to another by water and animal activity. As a result, layers (horizons) form in the soil profile. The alteration and movement of materials within a soil causes the formation of distinctive soil horizons. However, more recent definitions of soil embrace soils without any organic matter, such as those regoliths that formed on Mars and analogous conditions in planet Earth deserts. An example of the development of a soil would begin with the weathering of lava flow bedrock, which would produce the purely mineral-based parent material from which the soil texture forms. Soil development would proceed most rapidly from bare rock of recent flows in a warm climate, under heavy and frequent rainfall. Under such conditions, plants (in a first stage nitrogen-fixing
lichen A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.cyanobacteria Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blu ...
then
epilithic Lithophytes are plants that grow in or on rocks. They can be classified as either epilithic (or epipetric) or endolithic; epilithic lithophytes grow on the surfaces of rocks, while endolithic lithophytes grow in the crevices of rocks (and are also ...
higher plants) become established very quickly on basaltic lava, even though there is very little organic material. Basaltic minerals commonly weather relatively quickly, according to the Goldich dissolution series. The plants are supported by the porous rock as it is filled with nutrient-bearing water that carries minerals dissolved from the rocks. Crevasses and pockets, local topography of the rocks, would hold fine materials and harbour plant roots. The developing plant roots are associated with mineral-weathering mycorrhizal fungi that assist in breaking up the porous lava, and by these means organic matter and a finer mineral soil accumulate with time. Such initial stages of soil development have been described on volcanoes, inselbergs, and glacial moraines. How soil formation proceeds is influenced by at least five classic factors that are intertwined in the evolution of a soil: parent material, climate, topography (relief), organisms, and time. When reordered to climate, relief, organisms, parent material, and time, they form the acronym CROPT.


Physical properties

The physical properties of soils, in order of decreasing importance for ecosystem services such as
crop production Agriculture or farming is the practice of cultivating plants and livestock. Agriculture was the key development in the rise of sedentary human civilization, whereby farming of domesticated species created food surpluses that enabled people to ...
, are texture,
structure A structure is an arrangement and organization of interrelated elements in a material object or system, or the object or system so organized. Material structures include man-made objects such as buildings and machines and natural objects such as ...
, bulk density, porosity, consistency, temperature, colour and resistivity. Soil texture is determined by the relative proportion of the three kinds of soil mineral particles, called soil separates: sand, silt, and clay. At the next larger scale, soil structures called
ped Peds are aggregates of soil particles formed as a result of pedogenic processes; this natural organization of particles forms discrete units separated by pores or voids. The term is generally used for macroscopic (visible; i.e. greater than 1 mm i ...
s or more commonly ''soil aggregates'' are created from the soil separates when
iron oxide Iron oxides are chemical compounds composed of iron and oxygen. Several iron oxides are recognized. All are black magnetic solids. Often they are non-stoichiometric. Oxyhydroxides are a related class of compounds, perhaps the best known of whic ...
s, carbonates, clay, silica and
humus In classical soil science, humus is the dark organic matter in soil that is formed by the decomposition of plant and animal matter. It is a kind of soil organic matter. It is rich in nutrients and retains moisture in the soil. Humus is the Lati ...
, coat particles and cause them to adhere into larger, relatively
stable A stable is a building in which livestock, especially horses, are kept. It most commonly means a building that is divided into separate stalls for individual animals and livestock. There are many different types of stables in use today; the ...
secondary structures. Soil bulk density, when determined at standardized moisture conditions, is an estimate of
soil compaction In geotechnical engineering, soil compaction is the process in which stress applied to a soil causes densification as air is displaced from the pores between the soil grains. When stress is applied that causes densification due to water (or other ...
. Soil porosity consists of the void part of the soil volume and is occupied by gases or water. Soil consistency is the ability of soil materials to stick together. Soil temperature and colour are self-defining. Resistivity refers to the resistance to conduction of electric currents and affects the rate of corrosion of metal and concrete structures which are buried in soil. These properties vary through the depth of a soil profile, i.e. through
soil horizon A soil horizon is a layer parallel to the soil surface whose physical, chemical and biological characteristics differ from the layers above and beneath. Horizons are defined in many cases by obvious physical features, mainly colour and texture. ...
s. Most of these properties determine the aeration of the soil and the ability of water to infiltrate and to be held within the soil.


Soil moisture

Soil water content can be measured as volume or weight. Soil moisture levels, in order of decreasing water content, are saturation, field capacity, wilting point, air dry, and oven dry. Field capacity describes a drained wet soil at the point water content reaches equilibrium with gravity. Irrigating soil above field capacity risks percolation losses. Wilting point describes the dry limit for growing plants.
Available water capacity Available water capacity is the amount of water that can be stored in a soil profile and be available for growing crops. It is also known as available water content (AWC), profile available water (PAW) or total available water (TAW). The concept, p ...
is the amount of water held in a soil profile available to plants. As water content drops, plants have to work against increasing forces of adhesion and
sorptivity In 1957 John Philip introduced the term sorptivity and defined it as ''a measure of the capacity of the medium to absorb or desorb liquid by capillarity Capillary action (sometimes called capillarity, capillary motion, capillary rise, capi ...
to withdraw water. Irrigation scheduling avoids
moisture stress Moisture stress is a form of abiotic stress that occurs when the moisture of plant tissues is reduced to suboptimal levels. Water stress occurs in response to atmospheric and soil water availability when the transpiration rate exceeds the rate of w ...
by replenishing depleted water before stress is induced. Capillary action is responsible for moving groundwater from wet regions of the soil to dry areas. Subirrigation designs (e.g., wicking beds, sub-irrigated planters) rely on capillarity to supply water to plant roots. Capillary action can result in an evaporative concentration of salts, causing land degradation through
salination Soil salinity is the salt content in the soil; the process of increasing the salt content is known as salinization. Salts occur naturally within soils and water. Salination can be caused by natural processes such as mineral weathering or by the ...
.
Soil moisture measurement Water content or moisture content is the quantity of water contained in a material, such as soil (called soil moisture), rock, ceramics, crops, or wood. Water content is used in a wide range of scientific and technical areas, and is expressed as a ...
— measuring the water content of the soil, as can be expressed in terms of volume or weight — can be based on ''in situ'' probes (e.g.,
capacitance probe Capacitance sensors (or Dielectric sensors) use capacitance to measure the dielectric permittivity of a surrounding medium. The configuration is like the neutron probe where an access tube made of PVC is installed in the soil; probes can also be mo ...
s,
neutron probe A neutron probe is a device used to measure the quantity of water present in soil. A typical neutron probe contains a pellet of americium-241 and beryllium. The alpha particles emitted by the decay of the americium collide with the light beryllium ...
s), or remote sensing methods.


Soil gas

The atmosphere of soil, or
soil gas Soil gases (soil atmosphere) are the gases found in the air space between soil components. The spaces between the solid soil particles, if they do not contain water, are filled with air. The primary soil gases are nitrogen, carbon dioxide and oxygen ...
, is very different from the atmosphere above. The consumption of oxygen by microbes and plant roots, and their release of carbon dioxide, decreases oxygen and increases carbon dioxide concentration. Atmospheric CO2 concentration is 0.04%, but in the soil pore space it may range from 10 to 100 times that level, thus potentially contributing to the inhibition of root respiration. Calcareous soils regulate CO2 concentration by carbonate buffering, contrary to acid soils in which all CO2 respired accumulates in the soil pore system. At extreme levels, CO2 is toxic. This suggests a possible
negative feedback Negative feedback (or balancing feedback) occurs when some function (Mathematics), function of the output of a system, process, or mechanism is feedback, fed back in a manner that tends to reduce the fluctuations in the output, whether caused by ...
control of soil CO2 concentration through its inhibitory effects on root and microbial respiration (also called
soil respiration Soil respiration refers to the production of carbon dioxide when soil organisms respire. This includes respiration of plant roots, the rhizosphere, microbes and fauna. Soil respiration is a key ecosystem process that releases carbon from the ...
). In addition, the soil voids are saturated with water vapour, at least until the point of maximal hygroscopicity, beyond which a
vapour-pressure deficit Vapour-pressure deficit, or VPD, is the difference (deficit) between the amount of moisture in the air and how much moisture the air can hold when it is saturated. Once air becomes saturated, water will condense out to form clouds, dew or films o ...
occurs in the soil pore space. Adequate porosity is necessary, not just to allow the penetration of water, but also to allow gases to diffuse in and out. Movement of gases is by diffusion from high concentrations to lower, the
diffusion coefficient Diffusivity, mass diffusivity or diffusion coefficient is a proportionality constant between the molar flux due to molecular diffusion and the gradient in the concentration of the species (or the driving force for diffusion). Diffusivity is enco ...
decreasing with
soil compaction In geotechnical engineering, soil compaction is the process in which stress applied to a soil causes densification as air is displaced from the pores between the soil grains. When stress is applied that causes densification due to water (or other ...
. Oxygen from above atmosphere diffuses in the soil where it is consumed and levels of carbon dioxide in excess of above atmosphere diffuse out with other gases (including greenhouse gases) as well as water. Soil texture and
structure A structure is an arrangement and organization of interrelated elements in a material object or system, or the object or system so organized. Material structures include man-made objects such as buildings and machines and natural objects such as ...
strongly affect soil porosity and gas diffusion. It is the total pore space ( porosity) of soil, not the pore size, and the degree of pore interconnection (or conversely pore sealing), together with water content, air turbulence and temperature, that determine the rate of diffusion of gases into and out of soil. Platy soil structure and soil compaction (low porosity) impede gas flow, and a deficiency of oxygen may encourage anaerobic bacteria to reduce (strip oxygen) from nitrate NO3 to the gases N2, N2O, and NO, which are then lost to the atmosphere, thereby depleting the soil of nitrogen, a detrimental process called denitrification. Aerated soil is also a net sink of methane (CH4) but a net producer of methane (a strong heat-absorbing
greenhouse gas A greenhouse gas (GHG or GhG) is a gas that Absorption (electromagnetic radiation), absorbs and Emission (electromagnetic radiation), emits radiant energy within the thermal infrared range, causing the greenhouse effect. The primary greenhouse ...
) when soils are depleted of oxygen and subject to elevated temperatures. Soil atmosphere is also the seat of emissions of
volatiles Volatiles are the group of chemical elements and chemical compounds that can be readily vaporized. In contrast with volatiles, elements and compounds that are not readily vaporized are known as refractory substances. On planet Earth, the term ' ...
other than carbon and nitrogen oxides from various soil organisms, e.g. roots, bacteria, fungi, animals. These volatiles are used as chemical cues, making soil atmosphere the seat of interaction networks playing a decisive role in the stability, dynamics and evolution of soil ecosystems.
Biogenic A biogenic substance is a product made by or of life forms. While the term originally was specific to metabolite compounds that had toxic effects on other organisms, it has developed to encompass any constituents, secretions, and metabolites of p ...
soil volatile organic compounds are exchanged with the aboveground atmosphere, in which they are just 1–2 orders of magnitude lower than those from aboveground vegetation. Humans can get some idea of the soil atmosphere through the well-known 'after-the-rain' scent, when infiltering rainwater flushes out the whole soil atmosphere after a drought period, or when soil is excavated, a bulk property attributed in a
reductionist Reductionism is any of several related philosophical ideas regarding the associations between phenomena which can be described in terms of other simpler or more fundamental phenomena. It is also described as an intellectual and philosophical pos ...
manner to particular biochemical compounds such as
petrichor Petrichor () is the earthy olfaction, scent produced when rain falls on dry soil. The word is constructed , the ichor, ethereal fluid that is the blood of the gods in Greek mythology. Origins Long before this phenomenon received its name in 19 ...
or
geosmin Geosmin ( ) is an irregular sesquiterpenoid, produced from the universal sesquiterpene precursor farnesyl pyrophosphate (also known as farnesyl diphosphate), in a two-step -dependent reaction. Geosmin, along with the irregular monoterpene 2-met ...
.


Solid phase (soil matrix)

Soil particles can be classified by their chemical composition (
mineralogy Mineralogy is a subject of geology specializing in the scientific study of the chemistry, crystal structure, and physical (including optical) properties of minerals and mineralized artifacts. Specific studies within mineralogy include the proces ...
) as well as their size. The particle size distribution of a soil, its texture, determines many of the properties of that soil, in particular hydraulic conductivity and
water potential Water potential is the potential energy of water per unit volume relative to pure water in reference conditions. Water potential quantifies the tendency of water to move from one area to another due to osmosis, gravity, mechanical pressure and mat ...
, but the mineralogy of those particles can strongly modify those properties. The mineralogy of the finest soil particles, clay, is especially important.


Chemistry

The chemistry of a soil determines its ability to supply available plant nutrients and affects its physical properties and the health of its living population. In addition, a soil's chemistry also determines its
corrosivity Corrosion is a natural process that converts a refined metal into a more chemically stable oxide. It is the gradual deterioration of materials (usually a metal) by chemical or electrochemical reaction with their environment. Corrosion engin ...
, stability, and ability to absorb pollutants and to filter water. It is the surface chemistry of mineral and organic colloids that determines soil's chemical properties. A colloid is a small, insoluble particle ranging in size from 1
nanometer 330px, Different lengths as in respect to the molecular scale. The nanometre (international spelling as used by the International Bureau of Weights and Measures; SI symbol: nm) or nanometer (American and British English spelling differences#-re ...
to 1
micrometer Micrometer can mean: * Micrometer (device), used for accurate measurements by means of a calibrated screw * American spelling of micrometre The micrometre ( international spelling as used by the International Bureau of Weights and Measures; ...
, thus small enough to remain suspended by Brownian motion in a fluid medium without settling. Most soils contain organic colloidal particles called humus as well as the inorganic colloidal particles of clays. The very high specific surface area of colloids and their net electrical charges give soil its ability to hold and release ions. Negatively charged sites on colloids attract and release cations in what is referred to as
cation exchange Ion exchange is a reversible interchange of one kind of ion present in an insoluble solid with another of like charge present in a solution surrounding the solid with the reaction being used especially for softening or making water demineralised, ...
. Cation-exchange capacity is the amount of exchangeable cations per unit weight of dry soil and is expressed in terms of
milliequivalents An equivalent (symbol: officially equiv; unofficially but often Eq) is the amount of a substance that reacts with (or is ''equivalent'' to) an arbitrary amount (typically one mole) of another substance in a given chemical reaction. It is an arc ...
of
positively charged Electric charge is the physical property of matter that causes charged matter to experience a force when placed in an electromagnetic field. Electric charge can be ''positive'' or ''negative'' (commonly carried by protons and electrons respe ...
ions per 100 grams of soil (or centimoles of positive charge per kilogram of soil; cmolc/kg). Similarly, positively charged sites on colloids can attract and release anions in the soil, giving the soil anion exchange capacity.


Cation and anion exchange

The cation exchange, that takes place between colloids and soil water, buffers (moderates) soil pH, alters soil structure, and purifies percolating water by adsorbing cations of all types, both useful and harmful. The negative or positive charges on colloid particles make them able to hold cations or anions, respectively, to their surfaces. The charges result from four sources. # Isomorphous substitution occurs in clay during its formation, when lower-valence cations substitute for higher-valence cations in the crystal structure. Substitutions in the outermost layers are more effective than for the innermost layers, as the electric charge strength drops off as the square of the distance. The net result is oxygen atoms with net negative charge and the ability to attract cations. # Edge-of-clay oxygen atoms are not in balance ionically as the tetrahedral and octahedral structures are incomplete. # Hydroxyls may substitute for oxygens of the silica layers, a process called
hydroxylation In chemistry, hydroxylation can refer to: *(i) most commonly, hydroxylation describes a chemical process that introduces a hydroxyl group () into an organic compound. *(ii) the ''degree of hydroxylation'' refers to the number of OH groups in a ...
. When the hydrogens of the clay hydroxyls are ionised into solution, they leave the oxygen with a negative charge (anionic clays). # Hydrogens of humus hydroxyl groups may also be ionised into solution, leaving, similarly to clay, an oxygen with a negative charge. Cations held to the negatively charged colloids resist being washed downward by water and are out of reach of plant roots, thereby preserving the fertility of soils in areas of moderate rainfall and low temperatures. There is a hierarchy in the process of cation exchange on colloids, as cations differ in the strength of adsorption by the colloid and hence their ability to replace one another ( ion exchange). If present in equal amounts in the soil water solution: Al3+ replaces H+ replaces Ca2+ replaces Mg2+ replaces K+ same as replaces Na+ If one cation is added in large amounts, it may replace the others by the sheer force of its numbers. This is called law of mass action. This is largely what occurs with the addition of cationic fertilisers ( potash, lime). As the soil solution becomes more acidic (low pH, meaning an abundance of H+), the other cations more weakly bound to colloids are pushed into solution as hydrogen ions occupy exchange sites ( protonation). A low pH may cause the hydrogen of hydroxyl groups to be pulled into solution, leaving charged sites on the colloid available to be occupied by other cations. This ionisation of
hydroxy group In chemistry, a hydroxy or hydroxyl group is a functional group with the chemical formula and composed of one oxygen atom covalently bonded to one hydrogen atom. In organic chemistry, alcohols and carboxylic acids contain one or more hydroxy ...
s on the surface of soil colloids creates what is described as pH-dependent surface charges. Unlike permanent charges developed by isomorphous substitution, pH-dependent charges are variable and increase with increasing pH. Freed cations can be made available to plants but are also prone to be leached from the soil, possibly making the soil less fertile. Plants are able to excrete H+ into the soil through the synthesis of
organic acid An organic acid is an organic compound with acidic properties. The most common organic acids are the carboxylic acids, whose acidity is associated with their carboxyl group –COOH. Sulfonic acids, containing the group –SO2OH, are rel ...
s and by that means, change the pH of the soil near the root and push cations off the colloids, thus making those available to the plant.


Cation exchange capacity (CEC)

Cation exchange capacity is the soil's ability to remove cations from the soil water solution and sequester those to be exchanged later as the plant roots release hydrogen ions to the solution. CEC is the amount of exchangeable hydrogen cation (H+) that will combine with 100 grams dry weight of soil and whose measure is one milliequivalents per 100 grams of soil (1 meq/100 g). Hydrogen ions have a single charge and one-thousandth of a gram of hydrogen ions per 100 grams dry soil gives a measure of one milliequivalent of hydrogen ion. Calcium, with an atomic weight 40 times that of hydrogen and with a valence of two, converts to = 20 milliequivalents of hydrogen ion per 100 grams of dry soil or 20 meq/100 g. The modern measure of CEC is expressed as centimoles of positive charge per kilogram (cmol/kg) of oven-dry soil. Most of the soil's CEC occurs on clay and humus colloids, and the lack of those in hot, humid, wet climates (such as tropical rainforests), due to leaching and decomposition, respectively, explains the apparent sterility of tropical soils. Live plant roots also have some CEC, linked to their specific surface area.


Anion exchange capacity (AEC)

Anion exchange capacity is the soil's ability to remove anions (such as
nitrate Nitrate is a polyatomic ion A polyatomic ion, also known as a molecular ion, is a covalent bonded set of two or more atoms, or of a metal complex, that can be considered to behave as a single unit and that has a net charge that is not zer ...
, phosphate) from the soil water solution and sequester those for later exchange as the plant roots release carbonate anions to the soil water solution. Those colloids which have low CEC tend to have some AEC. Amorphous and sesquioxide clays have the highest AEC, followed by the iron oxides. Levels of AEC are much lower than for CEC, because of the generally higher rate of positively (versus negatively) charged surfaces on soil colloids, to the exception of variable-charge soils. Phosphates tend to be held at anion exchange sites. Iron and aluminum hydroxide clays are able to exchange their hydroxide anions (OH) for other anions. The order reflecting the strength of anion adhesion is as follows: : replaces replaces replaces Cl The amount of exchangeable anions is of a magnitude of tenths to a few milliequivalents per 100 g dry soil. As pH rises, there are relatively more hydroxyls, which will displace anions from the colloids and force them into solution and out of storage; hence AEC decreases with increasing pH (alkalinity).


Reactivity (pH)

Soil reactivity is expressed in terms of pH and is a measure of the
acid In computer science, ACID ( atomicity, consistency, isolation, durability) is a set of properties of database transactions intended to guarantee data validity despite errors, power failures, and other mishaps. In the context of databases, a sequ ...
ity or alkalinity of the soil. More precisely, it is a measure of hydronium concentration in an aqueous solution and ranges in values from 0 to 14 (acidic to basic) but practically speaking for soils, pH ranges from 3.5 to 9.5, as pH values beyond those extremes are toxic to life forms. At 25 °C an aqueous solution that has a pH of 3.5 has 10−3.5 moles H3O+ (hydronium ions) per litre of solution (and also 10−10.5 moles per litre OH). A pH of 7, defined as neutral, has 10−7 moles of hydronium ions per litre of solution and also 10−7 moles of OH per litre; since the two concentrations are equal, they are said to neutralise each other. A pH of 9.5 has 10−9.5 moles hydronium ions per litre of solution (and also 10−2.5 moles per litre OH). A pH of 3.5 has one million times more hydronium ions per litre than a solution with pH of 9.5 ( or 106) and is more acidic. The effect of pH on a soil is to remove from the soil or to make available certain ions. Soils with high acidity tend to have toxic amounts of aluminium and manganese. As a result of a trade-off between toxicity and requirement most nutrients are better available to plants at moderate pH, although most minerals are more soluble in acid soils. Soil organisms are hindered by high acidity, and most agricultural crops do best with mineral soils of pH 6.5 and organic soils of pH 5.5. Given that at low pH toxic metals (e.g. cadmium, zinc, lead) are positively charged as cations and organic pollutants are in non-ionic form, thus both made more available to organisms, it has been suggested that plants, animals and microbes commonly living in acid soils are pre-adapted to every kind of pollution, whether of natural or human origin. In high rainfall areas, soils tend to acidify as the basic cations are forced off the soil colloids by the mass action of hydronium ions from usual or unusual rain acidity against those attached to the colloids. High rainfall rates can then wash the nutrients out, leaving the soil inhabited only by those organisms which are particularly efficient to uptake nutrients in very acid conditions, like in tropical rainforests. Once the colloids are saturated with H3O+, the addition of any more hydronium ions or aluminum hydroxyl cations drives the pH even lower (more acidic) as the soil has been left with no buffering capacity. In areas of extreme rainfall and high temperatures, the clay and humus may be washed out, further reducing the buffering capacity of the soil. In low rainfall areas, unleached calcium pushes pH to 8.5 and with the addition of exchangeable sodium, soils may reach pH 10. Beyond a pH of 9, plant growth is reduced. High pH results in low
micro-nutrient Micronutrients are essential dietary elements required by organisms in varying quantities throughout life to orchestrate a range of physiological functions to maintain health. Micronutrient requirements differ between organisms; for example, huma ...
mobility, but water-soluble
chelates Chelation is a type of bonding of ions and molecules to metal ions. It involves the formation or presence of two or more separate coordinate bonds between a polydentate (multiple bonded) ligand and a single central metal atom. These ligands are ...
of those nutrients can correct the deficit. Sodium can be reduced by the addition of gypsum (calcium sulphate) as calcium adheres to clay more tightly than does sodium causing sodium to be pushed into the soil water solution where it can be washed out by an abundance of water.


Base saturation percentage

There are acid-forming cations (e.g. hydronium, aluminium, iron) and there are base-forming cations (e.g. calcium, magnesium, sodium). The fraction of the negatively-charged soil colloid exchange sites (CEC) that are occupied by base-forming cations is called
base saturation Cation-exchange capacity (CEC) is a measure of how many cations can be retained on soil particle surfaces. Negative charges on the surfaces of soil particles bind positively-charged atoms or molecules (cations), but allow these to exchange with o ...
. If a soil has a CEC of 20 meq and 5 meq are aluminium and hydronium cations (acid-forming), the remainder of positions on the colloids () are assumed occupied by base-forming cations, so that the base saturation is (the compliment 25% is assumed acid-forming cations). Base saturation is almost in direct proportion to pH (it increases with increasing pH). It is of use in calculating the amount of lime needed to neutralise an acid soil (lime requirement). The amount of lime needed to neutralize a soil must take account of the amount of acid forming ions on the colloids (exchangeable acidity), not just those in the soil water solution (free acidity). The addition of enough lime to neutralize the soil water solution will be insufficient to change the pH, as the acid forming cations stored on the soil colloids will tend to restore the original pH condition as they are pushed off those colloids by the calcium of the added lime.


Buffering

The resistance of soil to change in pH, as a result of the addition of acid or basic material, is a measure of the buffering capacity of a soil and (for a particular soil type) increases as the CEC increases. Hence, pure sand has almost no buffering ability, though soils high in colloids (whether mineral or organic) have high
buffering capacity A buffer solution (more precisely, pH buffer or hydrogen ion buffer) is an aqueous solution consisting of a mixture of a weak acid and its conjugate base, or vice versa. Its pH changes very little when a small amount of strong acid or base is a ...
. Buffering occurs by cation exchange and neutralisation. However, colloids are not the only regulators of soil pH. The role of carbonates should be underlined, too. More generally, according to pH levels, several buffer systems take precedence over each other, from calcium carbonate
buffer range A buffer solution (more precisely, pH buffer or hydrogen ion buffer) is an aqueous solution consisting of a mixture of a weak acid and its conjugate base, or vice versa. Its pH changes very little when a small amount of strong acid or base is ...
to iron buffer range. The addition of a small amount of highly basic aqueous ammonia to a soil will cause the
ammonium The ammonium cation is a positively-charged polyatomic ion with the chemical formula or . It is formed by the protonation of ammonia (). Ammonium is also a general name for positively charged or protonated substituted amines and quaternary a ...
to displace hydronium ions from the colloids, and the end product is water and colloidally fixed ammonium, but little permanent change overall in soil pH. The addition of a small amount of lime, Ca(OH)2, will displace hydronium ions from the soil colloids, causing the fixation of calcium to colloids and the evolution of CO2 and water, with little permanent change in soil pH. The above are examples of the buffering of soil pH. The general principal is that an increase in a particular cation in the soil water solution will cause that cation to be fixed to colloids (buffered) and a decrease in solution of that cation will cause it to be withdrawn from the colloid and moved into solution (buffered). The degree of buffering is often related to the CEC of the soil; the greater the CEC, the greater the buffering capacity of the soil.


Redox

Soil chemical reactions involve some combination of proton and electron transfer. Oxidation occurs if there is a loss of electrons in the transfer process while reduction occurs if there is a gain of electrons. Reduction potential is measured in volts or millivolts. Soil microbial communities develop along
electron transport chain An electron transport chain (ETC) is a series of protein complexes and other molecules that transfer electrons from electron donors to electron acceptors via redox reactions (both reduction and oxidation occurring simultaneously) and couples th ...
s, forming electrically conductive biofilms, and developing networks of bacterial nanowires. Redox factors in soil development, where formation of redoximorphic color features provides critical information for soil interpretation. Understanding the redox gradient is important to managing carbon sequestration, bioremediation, wetland delineation, and
soil-based microbial fuel cell Microbial fuel cell (MFC) is a type of bioelectrochemical fuel cell system that generates electric current by diverting electrons produced from the microbial oxidation of reduced compounds (also known as fuel or electron donor) on the anode to oxid ...
s.


Nutrients

Seventeen elements or nutrients are essential for plant growth and reproduction. They are carbon (C), hydrogen (H), oxygen (O), nitrogen (N), phosphorus (P), potassium (K),
sulfur Sulfur (or sulphur in British English) is a chemical element with the symbol S and atomic number 16. It is abundant, multivalent and nonmetallic. Under normal conditions, sulfur atoms form cyclic octatomic molecules with a chemical formula ...
(S), calcium (Ca), magnesium (Mg), iron (Fe),
boron Boron is a chemical element with the symbol B and atomic number 5. In its crystalline form it is a brittle, dark, lustrous metalloid; in its amorphous form it is a brown powder. As the lightest element of the ''boron group'' it has th ...
(B), manganese (Mn), copper (Cu), zinc (Zn),
molybdenum Molybdenum is a chemical element with the symbol Mo and atomic number 42 which is located in period 5 and group 6. The name is from Neo-Latin ''molybdaenum'', which is based on Ancient Greek ', meaning lead, since its ores were confused with lea ...
(Mo), nickel (Ni) and chlorine (Cl). Nutrients required for plants to complete their life cycle are considered essential nutrients. Nutrients that enhance the growth of plants but are not necessary to complete the plant's life cycle are considered non-essential. With the exception of carbon, hydrogen and oxygen, which are supplied by carbon dioxide and water, and nitrogen, provided through nitrogen fixation, the nutrients derive originally from the mineral component of the soil. The
Law of the Minimum Liebig's law of the minimum, often simply called Liebig's law or the law of the minimum, is a principle developed in agricultural science by Carl Sprengel (1840) and later popularized by Justus von Liebig. It states that growth is dictated not b ...
expresses that when the available form of a nutrient is not in enough proportion in the soil solution, then other nutrients cannot be taken up at an optimum rate by a plant. A particular nutrient ratio of the soil solution is thus mandatory for optimizing plant growth, a value which might differ from nutrient ratios calculated from plant composition. Plant uptake of nutrients can only proceed when they are present in a plant-available form. In most situations, nutrients are absorbed in an ionic form from (or together with) soil water. Although minerals are the origin of most nutrients, and the bulk of most nutrient elements in the soil is held in crystalline form within primary and secondary minerals, they weather too slowly to support rapid plant growth. For example, the application of finely ground minerals, feldspar and
apatite Apatite is a group of phosphate minerals, usually hydroxyapatite, fluorapatite and chlorapatite, with high concentrations of OH−, F− and Cl− ions, respectively, in the crystal. The formula of the admixture of the three most common e ...
, to soil seldom provides the necessary amounts of potassium and phosphorus at a rate sufficient for good plant growth, as most of the nutrients remain bound in the crystals of those minerals. The nutrients adsorbed onto the surfaces of clay colloids and soil organic matter provide a more accessible reservoir of many plant nutrients (e.g. K, Ca, Mg, P, Zn). As plants absorb the nutrients from the soil water, the soluble pool is replenished from the surface-bound pool. The decomposition of soil organic matter by microorganisms is another mechanism whereby the soluble pool of nutrients is replenished – this is important for the supply of plant-available N, S, P, and B from soil. Gram for gram, the capacity of humus to hold nutrients and water is far greater than that of clay minerals, most of the soil cation exchange capacity arising from charged carboxylic groups on organic matter. However, despite the great capacity of humus to retain water once water-soaked, its high hydrophobicity decreases its wettability. All in all, small amounts of humus may remarkably increase the soil's capacity to promote plant growth.


Soil organic matter

The organic material in soil is made up of organic compounds and includes plant, animal and microbial material, both living and dead. A typical soil has a biomass composition of 70% microorganisms, 22% macrofauna, and 8% roots. The living component of an acre of soil may include 900 lb of earthworms, 2400 lb of fungi, 1500 lb of bacteria, 133 lb of protozoa and 890 lb of arthropods and algae. A few percent of the soil organic matter, with small
residence time The residence time of a fluid parcel is the total time that the parcel has spent inside a control volume (e.g.: a chemical reactor, a lake, a human body). The residence time of a set of parcels is quantified in terms of the frequency distribution ...
, consists of the microbial
biomass Biomass is plant-based material used as a fuel for heat or electricity production. It can be in the form of wood, wood residues, energy crops, agricultural residues, and waste from industry, farms, and households. Some people use the terms bi ...
and metabolites of bacteria, molds, and actinomycetes that work to break down the dead organic matter. Were it not for the action of these micro-organisms, the entire carbon dioxide part of the atmosphere would be sequestered as organic matter in the soil. However, in the same time soil microbes contribute to carbon sequestration in the topsoil through the formation of stable humus. In the aim to sequester more carbon in the soil for alleviating the greenhouse effect it would be more efficient in the long-term to stimulate humification than to decrease litter decomposition. The main part of soil organic matter is a complex assemblage of small organic molecules, collectively called humus or humic substances. The use of these terms, which do not rely on a clear chemical classification, has been considered as obsolete. Other studies showed that the classical notion of molecule is not convenient for humus, which escaped most attempts done over two centuries to resolve it in unit components, but still is chemically distinct from polysaccharides, lignins and proteins. Most living things in soils, including plants, animals, bacteria, and fungi, are dependent on organic matter for nutrients and/or energy. Soils have organic compounds in varying degrees of decomposition which rate is dependent on temperature, soil moisture, and aeration. Bacteria and fungi feed on the raw organic matter, which are fed upon by
protozoa Protozoa (singular: protozoan or protozoon; alternative plural: protozoans) are a group of single-celled eukaryotes, either free-living or parasitic, that feed on organic matter such as other microorganisms or organic tissues and debris. Histo ...
, which in turn are fed upon by nematodes, annelids and arthropods, themselves able to consume and transform raw or humified organic matter. This has been called the soil food web, through which all organic matter is processed as in a
digestive system The human digestive system consists of the gastrointestinal tract plus the accessory organs of digestion (the tongue, salivary glands, pancreas, liver, and gallbladder). Digestion involves the breakdown of food into smaller and smaller compone ...
. Organic matter holds soils open, allowing the infiltration of air and water, and may hold as much as twice its weight in water. Many soils, including desert and rocky-gravel soils, have little or no organic matter. Soils that are all organic matter, such as peat (
histosols In both the World Reference Base for Soil Resources (WRB) and the USDA soil taxonomy, a Histosol is a soil consisting primarily of organic materials. They are defined as having or more of organic soil material in the upper . Organic soil materia ...
), are infertile. In its earliest stage of decomposition, the original organic material is often called raw organic matter. The final stage of decomposition is called humus. In grassland, much of the organic matter added to the soil is from the deep, fibrous, grass root systems. By contrast, tree leaves falling on the forest floor are the principal source of soil organic matter in the forest. Another difference is the frequent occurrence in the grasslands of fires that destroy large amounts of aboveground material but stimulate even greater contributions from roots. Also, the much greater acidity under any forests inhibits the action of certain soil organisms that otherwise would mix much of the surface litter into the mineral soil. As a result, the soils under grasslands generally develop a thicker
A horizon A soil horizon is a layer parallel to the soil surface whose physical, chemical and biological characteristics differ from the layers above and beneath. Horizons are defined in many cases by obvious physical features, mainly colour and texture. ...
with a deeper distribution of organic matter than in comparable soils under forests, which characteristically store most of their organic matter in the forest floor (
O horizon A soil horizon is a layer parallel to the soil surface whose physical, chemical and biological characteristics differ from the layers above and beneath. Horizons are defined in many cases by obvious physical features, mainly colour and texture. ...
) and thin A horizon.


Humus

Humus refers to organic matter that has been decomposed by soil microflora and fauna to the point where it is resistant to further breakdown. Humus usually constitutes only five percent of the soil or less by volume, but it is an essential source of nutrients and adds important textural qualities crucial to soil health and plant growth. Humus also feeds arthropods, termites and
earthworms An earthworm is a terrestrial invertebrate that belongs to the phylum Annelida. They exhibit a tube-within-a-tube body plan; they are externally segmented with corresponding internal segmentation; and they usually have setae on all segments. Th ...
which further improve the soil. The end product, humus, is suspended in colloidal form in the soil solution and forms a weak acid that can attack silicate minerals by chelating their iron and aluminum atoms. Humus has a high cation and anion exchange capacity that on a dry weight basis is many times greater than that of clay colloids. It also acts as a buffer, like clay, against changes in pH and soil moisture.
Humic acid Humic substances (HS) are organic compounds that are important components of humus, the major organic fraction of soil, peat, and coal (and also a constituent of many upland streams, dystrophic lakes, and ocean water). For a long era in the 19th ...
s and fulvic acids, which begin as raw organic matter, are important constituents of humus. After the death of plants, animals, and microbes, microbes begin to feed on the residues through their production of extra-cellular soil enzymes, resulting finally in the formation of humus. As the residues break down, only molecules made of aliphatic and aromatic hydrocarbons, assembled and stabilized by oxygen and hydrogen bonds, remain in the form of complex molecular assemblages collectively called humus. Humus is never pure in the soil, because it reacts with metals and clays to form complexes which further contribute to its stability and to soil structure. Although the structure of humus has in itself few nutrients (with the exception of constitutive metals such as calcium, iron and aluminum) it is able to attract and link, by weak bonds, cation and anion nutrients that can further be released into the soil solution in response to selective root uptake and changes in soil pH, a process of paramount importance for the maintenance of fertility in tropical soils.
Lignin Lignin is a class of complex organic polymers that form key structural materials in the support tissues of most plants. Lignins are particularly important in the formation of cell walls, especially in wood and bark, because they lend rigidity ...
is resistant to breakdown and accumulates within the soil. It also reacts with
proteins Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
, which further increases its resistance to decomposition, including enzymatic decomposition by microbes. Fats and waxes from plant matter have still more resistance to decomposition and persist in soils for thousand years, hence their use as tracers of past vegetation in buried soil layers. Clay soils often have higher organic contents that persist longer than soils without clay as the organic molecules adhere to and are stabilised by the clay. Proteins normally decompose readily, to the exception of
scleroproteins In molecular biology, fibrous proteins or scleroproteins are one of the three main classifications of protein structure (alongside globular and membrane proteins). Fibrous proteins are made up of elongated or fibrous polypeptide chains which fo ...
, but when bound to clay particles they become more resistant to decomposition. As for other proteins clay particles absorb the enzymes exuded by microbes, decreasing enzyme activity while protecting
extracellular enzymes Extracellular enzymes or exoenzymes are synthesized inside the cell and then secreted outside the cell, where their function is to break down complex macromolecules into smaller units to be taken up by the cell for growth and assimilation. These ...
from degradation. The addition of organic matter to clay soils can render that organic matter and any added nutrients inaccessible to plants and microbes for many years. A study showed increased soil fertility following the addition of mature compost to a clay soil. High soil tannin content can cause nitrogen to be sequestered as resistant tannin-protein complexes. Humus formation is a process dependent on the amount of plant material added each year and the type of base soil. Both are affected by climate and the type of organisms present. Soils with humus can vary in nitrogen content but typically have 3 to 6 percent nitrogen. Raw organic matter, as a reserve of nitrogen and phosphorus, is a vital component affecting
soil fertility Soil fertility refers to the ability of soil to sustain agricultural plant growth, i.e. to provide plant habitat and result in sustained and consistent yields of high quality.
. Humus also absorbs water, and expands and shrinks between dry and wet states to a higher extent than clay, increasing soil porosity. Humus is less stable than the soil's mineral constituents, as it is reduced by microbial decomposition, and over time its concentration diminishes without the addition of new organic matter. However, humus in its most stable forms may persist over centuries if not millennia.
Charcoal Charcoal is a lightweight black carbon residue produced by strongly heating wood (or other animal and plant materials) in minimal oxygen to remove all water and volatile constituents. In the traditional version of this pyrolysis process, cal ...
is a source of highly stable humus, called black carbon, which had been used traditionally to improve the fertility of nutrient-poor tropical soils. This very ancient practice, as ascertained in the genesis of
Amazonian dark earths ''Terra preta'' (, locally , literally "black soil" in Portuguese) is a type of very dark, fertile anthropogenic soil (anthrosol) found in the Amazon Basin. It is also known as "Amazonian dark earth" or "Indian black earth". In Portuguese its full ...
, has been renewed and became popular under the name of biochar. It has been suggested that biochar could be used to sequester more carbon in the fight against the greenhouse effect.


Climatological influence

The production, accumulation and degradation of organic matter are greatly dependent on climate. For example, when a thawing event occurs, the flux of soil gases with atmospheric gases is significantly influenced. Temperature, soil moisture and topography are the major factors affecting the accumulation of organic matter in soils. Organic matter tends to accumulate under wet or cold conditions where decomposer activity is impeded by low temperature or excess moisture which results in anaerobic conditions. Conversely, excessive rain and high temperatures of tropical climates enables rapid decomposition of organic matter and leaching of plant nutrients. Forest ecosystems on these soils rely on efficient recycling of nutrients and plant matter by the living plant and microbial biomass to maintain their productivity, a process which is disturbed by human activities. Excessive slope, in particular in the presence of cultivation for the sake of agriculture, may encourage the erosion of the top layer of soil which holds most of the raw organic material that would otherwise eventually become humus.


Plant residue

Cellulose and hemicellulose undergo fast decomposition by fungi and bacteria, with a half-life of 12–18 days in a temperate climate. Brown rot fungi can decompose the cellulose and hemicellulose, leaving the lignin and
phenolic compounds In organic chemistry, phenols, sometimes called phenolics, are a class of chemical compounds consisting of one or more hydroxyl groups (— O H) bonded directly to an aromatic hydrocarbon group. The simplest is phenol, . Phenolic compounds are c ...
behind.
Starch Starch or amylum is a polymeric carbohydrate consisting of numerous glucose units joined by glycosidic bonds. This polysaccharide is produced by most green plants for energy storage. Worldwide, it is the most common carbohydrate in human diets ...
, which is an
energy storage Energy storage is the capture of energy produced at one time for use at a later time to reduce imbalances between energy demand and energy production. A device that stores energy is generally called an accumulator or battery. Energy comes in ...
system for plants, undergoes fast decomposition by bacteria and fungi. Lignin consists of polymers composed of 500 to 600 units with a highly branched, amorphous structure, linked to cellulose, hemicellulose and
pectin Pectin ( grc, πηκτικός ': "congealed" and "curdled") is a heteropolysaccharide, a structural acid contained in the primary lamella, in the middle lamella, and in the cell walls of terrestrial plants. The principal, chemical component of ...
in
plant cell walls A cell wall is a structural layer surrounding some types of cells, just outside the cell membrane. It can be tough, flexible, and sometimes rigid. It provides the cell with both structural support and protection, and also acts as a filtering mech ...
. Lignin undergoes very slow decomposition, mainly by white rot fungi and actinomycetes; its half-life under temperate conditions is about six months.


Horizons

A horizontal layer of the soil, whose physical features, composition and age are distinct from those above and beneath, is referred to as a soil horizon. The naming of a horizon is based on the type of material of which it is composed. Those materials reflect the duration of specific processes of soil formation. They are labelled using a shorthand notation of letters and numbers which describe the horizon in terms of its colour, size, texture, structure, consistency, root quantity, pH, voids, boundary characteristics and presence of nodules or concretions. No soil profile has all the major horizons. Some, called entisols, may have only one horizon or are currently considered as having no horizon, in particular incipient soils from unreclaimed mining waste deposits, moraines,
volcanic cones Volcanic cones are among the simplest volcanic landforms. They are built by ejecta from a volcanic vent, piling up around the vent in the shape of a cone with a central crater. Volcanic cones are of different types, depending upon the nature and ...
sand dunes A dune is a landform composed of wind- or water-driven sand. It typically takes the form of a mound, ridge, or hill. An area with dunes is called a dune system or a dune complex. A large dune complex is called a dune field, while broad, fl ...
or
alluvial terrace Fluvial terraces are elongated terraces that flank the sides of floodplains and fluvial valleys all over the world. They consist of a relatively level strip of land, called a "tread", separated from either an adjacent floodplain, other fluvial te ...
s. Upper soil horizons may be lacking in truncated soils following wind or water ablation, with concomitant downslope burying of soil horizons, a natural process aggravated by agricultural practices such as tillage. The growth of trees is another source of disturbance, creating a micro-scale heterogeneity which is still visible in soil horizons once trees have died. By passing from a horizon to another, from the top to the bottom of the soil profile, one goes back in time, with past events registered in soil horizons like in sediment layers. Sampling
pollen Pollen is a powdery substance produced by seed plants. It consists of pollen grains (highly reduced microgametophytes), which produce male gametes (sperm cells). Pollen grains have a hard coat made of sporopollenin that protects the gametophyt ...
,
testate amoebae Testate amoebae (formerly thecamoebians, Testacea or Thecamoeba) are a polyphyletic group of unicellular amoeboid protists, which differ from naked amoebae in the presence of a test that partially encloses the cell, with an aperture from which the ...
and plant remains in soil horizons may help to reveal environmental changes (e.g. climate change, land use change) which occurred in the course of soil formation. Soil horizons can be dated by several methods such as radiocarbon, using pieces of charcoal provided they are of enough size to escape
pedoturbation Perturbation (from Latin: ''perturbare'' "to confuse, disorder, disturb", from ''per''- "through" + ''turbare'' "disturb, confuse," from ''turba'' "turmoil, crowd") is a set of pedology (soil study) and sedimentary geology processes relating to ch ...
by earthworm activity and other mechanical disturbances. Fossil soil horizons from paleosols can be found within sedimentary rock sequences, allowing the study of past environments. The exposure of parent material to favourable conditions produces mineral soils that are marginally suitable for plant growth, as is the case in eroded soils. The growth of vegetation results in the production of organic residues which fall on the ground as litter for plant aerial parts (leaf litter) or are directly produced belowground for subterranean plant organs (root litter), and then release dissolved organic matter. The remaining surficial organic layer, called the
O horizon A soil horizon is a layer parallel to the soil surface whose physical, chemical and biological characteristics differ from the layers above and beneath. Horizons are defined in many cases by obvious physical features, mainly colour and texture. ...
, produces a more active soil due to the effect of the organisms that live within it. Organisms colonise and break down organic materials, making available nutrients upon which other plants and animals can live. After sufficient time, humus moves downward and is deposited in a distinctive organic-mineral surface layer called the A horizon, in which organic matter is mixed with mineral matter through the activity of burrowing animals, a process called pedoturbation. This natural process does not go to completion in the presence of conditions detrimental to soil life such as strong acidity, cold climate or pollution, stemming in the accumulation of undecomposed organic matter within a single organic horizon overlying the mineral soil and in the juxtaposition of humified organic matter and mineral particles, without intimate mixing, in the underlying mineral horizons.


Classification

One of the first soil classification systems was developed by Russian scientist Vasily Dokuchaev around 1880. It was modified a number of times by American and European researchers and was developed into the system commonly used until the 1960s. It was based on the idea that soils have a particular morphology based on the materials and factors that form them. In the 1960s, a different classification system began to emerge which focused on
soil morphology Soil morphology is the study of the formation and description of soil types within various soil horizons. C.F. Marbut championed reliance on soil morphology instead of on theories of pedogenesis for soil classification because theories of soil gen ...
instead of parental materials and soil-forming factors. Since then, it has undergone further modifications. The World Reference Base for Soil Resources aims to establish an international reference base for soil classification.


Uses

Soil is used in agriculture, where it serves as the anchor and primary nutrient base for plants. The types of soil and available moisture determine the species of plants that can be cultivated.
Agricultural soil science Agricultural soil science is a branch of soil science that deals with the study of edaphic conditions as they relate to the production of food and fiber. In this context, it is also a constituent of the field of agronomy and is thus also descr ...
was the primeval domain of soil knowledge, long time before the advent of pedology in the 19th century. However, as demonstrated by aeroponics, aquaponics and hydroponics, soil material is not an absolute essential for agriculture, and soilless cropping systems have been claimed as the future of agriculture for an endless growing mankind. Soil material is also a critical component in mining, construction and landscape development industries. Soil serves as a foundation for most construction projects. The movement of massive volumes of soil can be involved in
surface mining Surface mining, including strip mining, open-pit mining and mountaintop removal mining, is a broad category of mining in which soil and rock overlying the mineral deposit (the overburden) are removed, in contrast to underground mining, in which ...
,
road building A road is a linear way for the conveyance of traffic that mostly has an improved surface for use by vehicles (motorized and non-motorized) and pedestrians. Unlike streets, the main function of roads is transportation. There are many types of ...
and dam construction. Earth sheltering is the architectural practice of using soil for external thermal mass against building walls. Many building materials are soil based. Loss of soil through urbanization is growing at a high rate in many areas and can be critical for the maintenance of
subsistence agriculture Subsistence agriculture occurs when farmers grow food crops to meet the needs of themselves and their families on smallholdings. Subsistence agriculturalists target farm output for survival and for mostly local requirements, with little or no su ...
. Soil resources are critical to the environment, as well as to food and fibre production, producing 98.8% of food consumed by humans. Soil provides minerals and water to plants according to several processes involved in plant nutrition. Soil absorbs rainwater and releases it later, thus preventing floods and drought, flood regulation being one of the major ecosystem services provided by soil. Soil cleans water as it percolates through it. Soil is the habitat for many organisms: the major part of known and unknown biodiversity is in the soil, in the form of earthworms, woodlice, millipedes,
centipede Centipedes (from New Latin , "hundred", and Latin , " foot") are predatory arthropods belonging to the class Chilopoda (Ancient Greek , ''kheilos'', lip, and New Latin suffix , "foot", describing the forcipules) of the subphylum Myriapoda, an ...
s, snails,
slug Slug, or land slug, is a common name for any apparently shell-less terrestrial gastropod mollusc. The word ''slug'' is also often used as part of the common name of any gastropod mollusc that has no shell, a very reduced shell, or only a smal ...
s, mites, springtails, enchytraeids,
nematode The nematodes ( or grc-gre, Νηματώδη; la, Nematoda) or roundworms constitute the phylum Nematoda (also called Nemathelminthes), with plant-Parasitism, parasitic nematodes also known as eelworms. They are a diverse animal phylum inhab ...
s, protists), bacteria,
archaea Archaea ( ; singular archaeon ) is a domain of single-celled organisms. These microorganisms lack cell nuclei and are therefore prokaryotes. Archaea were initially classified as bacteria, receiving the name archaebacteria (in the Archaebac ...
, fungi and
algae Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular mic ...
; and most organisms living above ground have part of them ( plants) or spend part of their life cycle ( insects) below-ground. Above-ground and below-ground biodiversities are tightly interconnected, making
soil protection Soil conservation is the prevention of loss of the topmost layer of the soil from erosion or prevention of reduced fertility caused by over usage, acidification, salinization or other chemical soil contamination. Slash-and-burn and other unsust ...
of paramount importance for any
restoration Restoration is the act of restoring something to its original state and may refer to: * Conservation and restoration of cultural heritage ** Audio restoration ** Film restoration ** Image restoration ** Textile restoration * Restoration ecology ...
or conservation plan. The biological component of soil is an extremely important carbon sink since about 57% of the biotic content is carbon. Even in deserts, cyanobacteria,
lichen A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.moss Mosses are small, non-vascular flowerless plants in the taxonomic division Bryophyta (, ) '' sensu stricto''. Bryophyta (''sensu lato'', Schimp. 1879) may also refer to the parent group bryophytes, which comprise liverworts, mosses, and hor ...
es form
biological soil crust Biological soil crusts are communities of living organisms on the soil surface in arid and semi-arid ecosystems. They are found throughout the world with varying species composition and cover depending on topography, soil characteristics, climate, ...
s which capture and sequester a significant amount of carbon by photosynthesis. Poor farming and grazing methods have degraded soils and released much of this sequestered carbon to the atmosphere. Restoring the world's soils could offset the effect of increases in greenhouse gas emissions and slow global warming, while improving crop yields and reducing water needs. Waste management often has a soil component. Septic drain fields treat septic tank effluent using aerobic soil processes. Land application of waste water relies on soil biology to aerobically treat BOD. Alternatively,
landfill A landfill site, also known as a tip, dump, rubbish dump, garbage dump, or dumping ground, is a site for the disposal of waste materials. Landfill is the oldest and most common form of waste disposal, although the systematic burial of the waste ...
s use soil for
daily cover The daily cover on an operational landfill site is the layer of compressed soil or earth which is laid on top of a days deposition of waste. Benefits of using daily cover include: * Reduction of odor and air emissions * Control of disease vector ...
, isolating waste deposits from the atmosphere and preventing unpleasant smells. Composting is now widely used to treat aerobically solid domestic waste and dried effluents of
settling basin A settling basin, settling pond or decant pond is an earthen or concrete structure using sedimentation to remove settleable matter and turbidity from wastewater. The basins are used to control water pollution in diverse industries such as agricult ...
s. Although compost is not soil, biological processes taking place during composting are similar to those occurring during decomposition and humification of soil organic matter. Organic soils, especially peat, serve as a significant fuel and horticultural resource. Peat soils are also commonly used for the sake of agriculture in Nordic countries, because peatland sites, when drained, provide fertile soils for food production. However, wide areas of peat production, such as rain-fed sphagnum
bog A bog or bogland is a wetland that accumulates peat as a deposit of dead plant materials often mosses, typically sphagnum moss. It is one of the four main types of wetlands. Other names for bogs include mire, mosses, quagmire, and muskeg; a ...
s, also called blanket bogs or raised bogs, are now protected because of their patrimonial interest. As an example, Flow Country, covering 4,000 square kilometres of rolling expanse of blanket bogs in Scotland, is now candidate for being included in the World Heritage List. Under present-day global warming peat soils are thought to be involved in a self-reinforcing (positive feedback) process of increased emission of greenhouse gases (methane and carbon dioxide) and increased temperature, a contention which is still under debate when replaced at field scale and including stimulated plant growth.
Geophagy Geophagia (), also known as geophagy (), is the intentional practice of eating earth or soil-like substances such as clay, chalk, or termite mounds. It is a behavioural adaptation that occurs in many non-human animals and has been documented in ...
is the practice of eating soil-like substances. Both animals and humans occasionally consume soil for medicinal, recreational, or religious purposes. It has been shown that some
monkeys Monkey is a common name that may refer to most mammals of the infraorder Simiiformes, also known as the simians. Traditionally, all animals in the group now known as simians are counted as monkeys except the apes, which constitutes an incomple ...
consume soil, together with their preferred food (tree foliage and
fruits In botany, a fruit is the seed-bearing structure in flowering plants that is formed from the ovary after flowering. Fruits are the means by which flowering plants (also known as angiosperms) disseminate their seeds. Edible fruits in particula ...
), in order to alleviate tannin toxicity. Soils filter and purify water and affect its chemistry. Rain water and pooled water from ponds, lakes and rivers percolate through the soil horizons and the upper
rock strata In geology and related fields, a stratum ( : strata) is a layer of rock or sediment characterized by certain lithologic properties or attributes that distinguish it from adjacent layers from which it is separated by visible surfaces known as ei ...
, thus becoming groundwater.
Pests PESTS was an anonymous American activist group formed in 1986 to critique racism, tokenism, and exclusion in the art world. PESTS produced newsletters, posters, and other print material highlighting examples of discrimination in gallery represent ...
( viruses) and pollutants, such as persistent organic pollutants ( chlorinated
pesticide Pesticides are substances that are meant to control pests. This includes herbicide, insecticide, nematicide, molluscicide, piscicide, avicide, rodenticide, bactericide, insect repellent, animal repellent, microbicide, fungicide, and lampri ...
s, polychlorinated biphenyls), oils ( hydrocarbons), heavy metals ( lead, zinc, cadmium), and excess nutrients (nitrates, sulfates, phosphates) are filtered out by the soil. Soil organisms
metabolise Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
them or immobilise them in their biomass and necromass, thereby incorporating them into stable humus. The physical integrity of soil is also a prerequisite for avoiding landslides in rugged landscapes.


Degradation

Land degradation is a human-induced or natural process which impairs the capacity of land to function. Soil degradation involves
acidification Acidification may refer to: * Ocean acidification, decrease in the pH of the Earth's oceans * Freshwater acidification, atmospheric depositions and soil leaching of SOx and NOx * Soil acidification, buildup of hydrogen cations, which reduces the ...
, contamination,
desertification Desertification is a type of land degradation in drylands in which biological productivity is lost due to natural processes or induced by human activities whereby fertile areas become increasingly arid. It is the spread of arid areas caused by ...
, erosion or
salination Soil salinity is the salt content in the soil; the process of increasing the salt content is known as salinization. Salts occur naturally within soils and water. Salination can be caused by natural processes such as mineral weathering or by the ...
.


Acidification

Soil acidification is beneficial in the case of alkaline soils, but it degrades land when it lowers
crop productivity Agricultural productivity is measured as the ratio of agricultural outputs to inputs. While individual products are usually measured by weight, which is known as crop yield, varying products make measuring overall agricultural output difficu ...
, soil biological activity and increases soil vulnerability to contamination and erosion. Soils are initially acid and remain such when their parent materials are low in basic
cation An ion () is an atom or molecule with a net electrical charge. The charge of an electron is considered to be negative by convention and this charge is equal and opposite to the charge of a proton, which is considered to be positive by convent ...
s (calcium, magnesium, potassium and sodium). On parent materials richer in weatherable minerals acidification occurs when basic cations are leached from the soil profile by rainfall or exported by the harvesting of forest or agricultural crops. Soil acidification is accelerated by the use of acid-forming
nitrogenous fertilizer A fertilizer (American English) or fertiliser (British English; see spelling differences) is any material of natural or synthetic origin that is applied to soil or to plant tissues to supply plant nutrients. Fertilizers may be distinct from ...
s and by the effects of
acid precipitation Acid rain is rain or any other form of precipitation that is unusually acidic, meaning that it has elevated levels of hydrogen ions (low pH). Most water, including drinking water, has a neutral pH that exists between 6.5 and 8.5, but aci ...
. Deforestation is another cause of soil acidification, mediated by increased leaching of soil nutrients in the absence of tree canopies.


Contamination

Soil contamination at low levels is often within a soil's capacity to treat and assimilate waste material. Soil biota can treat waste by transforming it, mainly through microbial enzymatic activity. Soil organic matter and soil minerals can adsorb the waste material and decrease its toxicity, although when in colloidal form they may transport the adsorbed contaminants to subsurface environments. Many waste treatment processes rely on this natural bioremediation capacity. Exceeding treatment capacity can damage soil biota and limit soil function. Derelict soils occur where industrial contamination or other development activity damages the soil to such a degree that the land cannot be used safely or productively. Remediation of derelict soil uses principles of geology, physics, chemistry and biology to degrade, attenuate, isolate or remove soil contaminants to restore
soil functions Soil functions are general capabilities of soils that are important for various agricultural, environmental, nature protection, landscape architecture and urban applications. Soil can perform many functions and these include functions related to th ...
and values. Techniques include leaching, air sparging,
soil conditioner A soil conditioner is a product which is added to soil to improve the soil’s physical qualities, usually its fertility (ability to provide nutrition for plants) and sometimes its mechanics. In general usage, the term "soil conditioner" is often ...
s, phytoremediation, bioremediation and Monitored Natural Attenuation. An example of diffuse pollution with contaminants is copper accumulation in vineyards and orchards to which fungicides are repeatedly applied, even in organic farming. Microfibres from synthetic textiles are another type of plastic soil contamination, 100% of agricultural soil samples from southwestern China contained plastic particles, 92% of which were microfibres. Sources of microfibres likely included string or twine, as well as irrigation water in which clothes had been washed. The application of biosolids from sewage sludge and compost can introduce microplastics to soils. This adds to the burden of microplastics from other sources (e.g. the atmosphere). Approximately half the sewage sludge in Europe and North America is applied to agricultural land. In Europe it has been estimated that for every million inhabitants 113 to 770 tonnes of microplastics are added to agricultural soils each year.


Desertification

Desertification Desertification is a type of land degradation in drylands in which biological productivity is lost due to natural processes or induced by human activities whereby fertile areas become increasingly arid. It is the spread of arid areas caused by ...
, an environmental process of ecosystem degradation in arid and semi-arid regions, is often caused by badly adapted human activities such as overgrazing or excess harvesting of
firewood Firewood is any wooden material that is gathered and used for fuel. Generally, firewood is not highly processed and is in some sort of recognizable log or branch form, compared to other forms of wood fuel like pellets or chips. Firewood can ...
. It is a common misconception that drought causes desertification. Droughts are common in arid and semiarid lands. Well-managed lands can recover from drought when the rains return. Soil management tools include maintaining soil nutrient and organic matter levels, reduced tillage and increased cover. These practices help to control erosion and maintain productivity during periods when moisture is available. Continued land abuse during droughts, however, increases land degradation. Increased population and livestock pressure on marginal lands accelerates desertification. It is now questioned whether present-day climate warming will favour or disfavour desertification, with contradictory reports about predicted rainfall trends associated with increased temperature, and strong discrepancies among regions, even in the same country.


Erosion

Erosion of soil is caused by water, wind, ice, and movement in response to gravity. More than one kind of erosion can occur simultaneously. Erosion is distinguished from weathering, since erosion also transports eroded soil away from its place of origin (soil in transit may be described as sediment). Erosion is an intrinsic natural process, but in many places it is greatly increased by human activity, especially unsuitable land use practices. These include
agricultural Agriculture or farming is the practice of cultivating Plant, plants and livestock. Agriculture was the key development in the rise of Sedentism, sedentary human civilization, whereby farming of Domestication, domesticated species created food ...
activities which leave the soil bare during times of heavy rain or strong winds, overgrazing, deforestation, and improper construction activity. Improved management can limit erosion. Soil conservation techniques which are employed include changes of land use (such as replacing erosion-prone crops with grass or other soil-binding plants), changes to the timing or type of agricultural operations, terrace building, use of erosion-suppressing cover materials (including cover crops and other plants), limiting disturbance during construction, and avoiding construction during erosion-prone periods and in erosion-prone places such as steep slopes. Historically, one of the best examples of large-scale soil erosion due to unsuitable land-use practices is wind erosion (the so-called dust bowl) which ruined American and Canadian prairies during the 1930s, when immigrant farmers, encouraged by the federal government of both countries, settled and converted the original shortgrass prairie to agricultural crops and
cattle ranching A ranch (from es, rancho/Mexican Spanish) is an area of land, including various structures, given primarily to ranching, the practice of raising grazing livestock such as cattle and sheep. It is a subtype of a farm. These terms are most often ...
. A serious and long-running water erosion problem occurs in
China China, officially the People's Republic of China (PRC), is a country in East Asia. It is the world's most populous country, with a population exceeding 1.4 billion, slightly ahead of India. China spans the equivalent of five time zones and ...
, on the middle reaches of the Yellow River and the upper reaches of the Yangtze River. From the Yellow River, over 1.6 billion tons of sediment flow each year into the ocean. The sediment originates primarily from water erosion (gully erosion) in the Loess Plateau region of northwest China. Soil piping is a particular form of soil erosion that occurs below the soil surface. It causes
levee A levee (), dike (American English), dyke (English in the Commonwealth of Nations, Commonwealth English), embankment, floodbank, or stop bank is a structure that is usually soil, earthen and that often runs parallel (geometry), parallel to ...
and dam failure, as well as sink hole formation. Turbulent flow removes soil starting at the mouth of the seep flow and the
subsoil Subsoil is the layer of soil under the topsoil on the surface of the ground. Like topsoil, it is composed of a variable mixture of small particles such as sand, silt and clay, but with a much lower percentage of organic matter and humus, and it ...
erosion advances up-gradient. The term sand boil is used to describe the appearance of the discharging end of an active soil pipe.


Salination

Soil salination Soil salinity is the salt content in the soil; the process of increasing the salt content is known as salinization. Salts occur naturally within soils and water. Salination can be caused by natural processes such as mineral weathering or by the ...
is the accumulation of free salts to such an extent that it leads to degradation of the agricultural value of soils and vegetation. Consequences include corrosion damage, reduced plant growth, erosion due to loss of plant cover and soil structure, and water quality problems due to sedimentation. Salination occurs due to a combination of natural and human-caused processes. Arid conditions favour salt accumulation. This is especially apparent when soil parent material is saline. Irrigation of arid lands is especially problematic. All irrigation water has some level of salinity. Irrigation, especially when it involves leakage from canals and overirrigation in the field, often raises the underlying water table. Rapid salination occurs when the land surface is within the
capillary fringe The capillary fringe is the subsurface layer in which groundwater seeps up from a water table by capillary action to fill pores. Pores at the base of the capillary fringe are filled with water due to tension saturation. This saturated portion of t ...
of saline groundwater. Soil salinity control involves watertable control and flushing with higher levels of applied water in combination with tile drainage or another form of subsurface drainage.


Reclamation

Soils which contain high levels of particular clays with high swelling properties, such as smectites, are often very fertile. For example, the smectite-rich
paddy Paddy may refer to: People *Paddy (given name), a list of people with the given name or nickname *An List of ethnic slurs#P, ethnic slur for an Irishman Birds *Paddy (pigeon), a Second World War carrier pigeon *Snowy sheathbill or paddy, a bird ...
soils of Thailand's Central Plains are among the most productive in the world. However, the overuse of mineral nitrogen fertilizers and pesticides in
irrigated Irrigation (also referred to as watering) is the practice of applying controlled amounts of water to land to help grow crops, landscape plants, and lawns. Irrigation has been a key aspect of agriculture for over 5,000 years and has been devel ...
intensive
rice production Rice is the seed of the grass species ''Oryza sativa'' (Asian rice) or less commonly ''Oryza glaberrima'' (African rice). The name wild rice is usually used for species of the genera ''Zizania'' and '' Porteresia'', both wild and domesticated, ...
has endangered these soils, forcing farmers to implement integrated practices based on Cost Reduction Operating Principles. Many farmers in tropical areas, however, struggle to retain organic matter and clay in the soils they work. In recent years, for example, productivity has declined and soil erosion has increased in the low-clay soils of northern Thailand, following the abandonment of shifting cultivation for a more permanent land use. Farmers initially responded by adding organic matter and clay from termite mound material, but this was
unsustainable Specific definitions of sustainability are difficult to agree on and have varied in the literature and over time. The concept of sustainability can be used to guide decisions at the global, national, and individual levels (e.g. sustainable livin ...
in the long-term because of rarefaction of termite mounds. Scientists experimented with adding bentonite, one of the smectite family of clays, to the soil. In field trials, conducted by scientists from the
International Water Management Institute The International Water Management Institute (IWMI) is a non-profit international water management research organisation under the CGIAR with its headquarters in Colombo, Sri Lanka, and offices across Africa and Asia. Research at the Institute foc ...
(IWMI) in cooperation with Khon Kaen University and local farmers, this had the effect of helping retain water and nutrients. Supplementing the farmer's usual practice with a single application of 200 kg bentonite per rai (6.26 rai = 1 hectare) resulted in an average yield increase of 73%. Other studies showed that applying bentonite to degraded sandy soils reduced the risk of crop failure during drought years. In 2008, three years after the initial trials, IWMI scientists conducted a survey among 250 farmers in northeast Thailand, half of whom had applied bentonite to their fields. The average improvement for those using the clay addition was 18% higher than for non-clay users. Using the clay had enabled some farmers to switch to growing vegetables, which need more fertile soil. This helped to increase their income. The researchers estimated that 200 farmers in northeast Thailand and 400 in Cambodia had adopted the use of clays, and that a further 20,000 farmers were introduced to the new technique. If the soil is too high in clay or salts (e.g.
saline sodic soil Soil salinity is the salt content in the soil; the process of increasing the salt content is known as salinization. Salts occur naturally within soils and water. Salination can be caused by natural processes such as mineral weathering or by the ...
), adding gypsum, washed river sand and organic matter (e.g. municipal solid waste) will balance the composition. Adding organic matter, like ramial chipped wood or
compost Compost is a mixture of ingredients used as plant fertilizer and to improve soil's physical, chemical and biological properties. It is commonly prepared by decomposing plant, food waste, recycling organic materials and manure. The resulting m ...
, to soil which is depleted in nutrients and too high in sand will boost its quality and improve production. Special mention must be made of the use of
charcoal Charcoal is a lightweight black carbon residue produced by strongly heating wood (or other animal and plant materials) in minimal oxygen to remove all water and volatile constituents. In the traditional version of this pyrolysis process, cal ...
, and more generally biochar to improve nutrient-poor tropical soils, a process based on the higher fertility of anthropogenic pre-Columbian Amazonian Dark Earths, also called Terra Preta de Índio, due to interesting physical and chemical properties of soil black carbon as a source of stable humus. However, the uncontrolled application of
charred Charring is a chemical process of incomplete combustion of certain solids when subjected to high heat. Heat distillation removes water vapour and volatile organic compounds ( syngas) from the matrix. The residual black carbon material is char, as d ...
waste products of all kinds may endanger soil life and human health.


History of studies and research

The history of the study of soil is intimately tied to humans' urgent need to provide food for themselves and forage for their animals. Throughout history, civilizations have prospered or declined as a function of the availability and productivity of their soils.


Studies of soil fertility

The Greek historian Xenophon (450–355  BCE) is credited with being the first to expound upon the merits of green-manuring crops: 'But then whatever weeds are upon the ground, being turned into earth, enrich the soil as much as dung.' Columella's ''Of husbandry'', circa 60  CE, advocated the use of lime and that clover and
alfalfa Alfalfa () (''Medicago sativa''), also called lucerne, is a perennial flowering plant in the legume family Fabaceae. It is cultivated as an important forage crop in many countries around the world. It is used for grazing, hay, and silage, as w ...
(
green manure In agriculture, a green manure is a crop specifically produced to be incorporated into the soil while still green. Typically, the green manure's biomass is incorporated with a plow or disk, as is often done with (brown) manure. The primary goal ...
) should be turned under, and was used by 15 generations (450 years) under the Roman Empire until its collapse. From the
fall of Rome The fall of the Western Roman Empire (also called the fall of the Roman Empire or the fall of Rome) was the loss of central political control in the Western Roman Empire, a process in which the Empire failed to enforce its rule, and its vas ...
to the French Revolution, knowledge of soil and agriculture was passed on from parent to child and as a result, crop yields were low. During the European Middle Ages, Yahya Ibn al-'Awwam's handbook, with its emphasis on irrigation, guided the people of North Africa, Spain and the Middle East; a translation of this work was finally carried to the southwest of the United States when under Spanish influence.
Olivier de Serres Olivier de Serres (; 1539–1619) was a French author and soil scientist whose '' Théâtre d'Agriculture'' (1600) was the accepted textbook of French agriculture in the 17th century. Biography Serres was born in 1539 at Villeneuve-de-Berg, A ...
, considered the father of French
agronomy Agronomy is the science and technology of producing and using plants by agriculture for food, fuel, fiber, chemicals, recreation, or land conservation. Agronomy has come to include research of plant genetics, plant physiology, meteorology, and ...
, was the first to suggest the abandonment of
fallowing Crop rotation is the practice of growing a series of different types of crops in the same area across a sequence of growing seasons. It reduces reliance on one set of nutrients, pest and weed pressure, and the probability of developing resistant ...
and its replacement by hay meadows within crop rotations. He also highlighted the importance of soil (the French terroir) in the management of vineyards. His famous book contributed to the rise of modern, sustainable agriculture and to the collapse of old
agricultural practices Agriculture or farming is the practice of cultivating plants and livestock. Agriculture was the key development in the rise of sedentary human civilization, whereby farming of domesticated species created food surpluses that enabled people ...
such as
soil amendment A soil conditioner is a product which is added to soil to improve the soil’s physical qualities, usually its fertility (ability to provide nutrition for plants) and sometimes its mechanics. In general usage, the term "soil conditioner" is often ...
for crops by the lifting of
forest litter The forest floor, also called detritus, wikt:duff#Noun 2, duff and the O horizon, is one of the most distinctive features of a forest ecosystem. It mainly consists of shed vegetative parts, such as leaves, branches, bark, and stems, existing ...
and
assarting Assarting is the act of clearing forested lands for use in agriculture or other purposes. In English land law, it was illegal to assart any part of a royal forest without permission. This was the greatest trespass that could be committed in a ...
, which ruined the soils of western Europe during the Middle Ages and even later on according to regions. Experiments into what made plants grow first led to the idea that the ash left behind when plant matter was burned was the essential element but overlooked the role of nitrogen, which is not left on the ground after combustion, a belief which prevailed until the 19th century. In about 1635, the Flemish chemist Jan Baptist van Helmont thought he had proved water to be the essential element from his famous five years' experiment with a willow tree grown with only the addition of rainwater. His conclusion came from the fact that the increase in the plant's weight had apparently been produced only by the addition of water, with no reduction in the soil's weight. John Woodward ( 1728) experimented with various types of water ranging from clean to muddy and found muddy water the best, and so he concluded that earthy matter was the essential element. Others concluded it was humus in the soil that passed some essence to the growing plant. Still others held that the vital growth principal was something passed from dead plants or animals to the new plants. At the start of the 18th century, Jethro Tull demonstrated that it was beneficial to cultivate (stir) the soil, but his opinion that the stirring made the fine parts of soil available for plant absorption was erroneous. As chemistry developed, it was applied to the investigation of soil fertility. The French chemist Antoine Lavoisier showed in about 1778 that plants and animals must combust oxygen internally to live. He was able to deduce that most of the weight of van Helmont's willow tree derived from air. It was the French agriculturalist
Jean-Baptiste Boussingault Jean-Baptiste Joseph Dieudonné Boussingault (2 February 1801 – 11 May 1887) was a French chemist who made significant contributions to agricultural science, petroleum science and metallurgy. Biography Jean-Baptiste Boussingault – an agric ...
who by means of experimentation obtained evidence showing that the main sources of carbon, hydrogen and oxygen for plants were air and water, while nitrogen was taken from soil.
Justus von Liebig Justus Freiherr von Liebig (12 May 1803 – 20 April 1873) was a German scientist who made major contributions to agricultural and biological chemistry, and is considered one of the principal founders of organic chemistry. As a professor at t ...
in his book ''Organic chemistry in its applications to agriculture and physiology'' (published 1840), asserted that the chemicals in plants must have come from the soil and air and that to maintain soil fertility, the used minerals must be replaced. Liebig nevertheless believed the nitrogen was supplied from the air. The enrichment of soil with guano by the Incas was rediscovered in 1802, by Alexander von Humboldt. This led to its mining and that of Chilean nitrate and to its application to soil in the United States and Europe after 1840. The work of Liebig was a revolution for agriculture, and so other investigators started experimentation based on it. In England John Bennet Lawes and Joseph Henry Gilbert worked in the Rothamsted Experimental Station, founded by the former, and that plants took nitrogen from the soil, and that salts needed to be in an available state to be absorbed by plants. Their investigations also produced the superphosphate, consisting in the acid treatment of phosphate rock. This led to the invention and use of salts of potassium (K) and nitrogen (N) as fertilizers. Ammonia generated by the production of coke was recovered and used as fertiliser. Finally, the chemical basis of nutrients delivered to the soil in manure was understood and in the mid-19th century chemical fertilisers were applied. However, the dynamic interaction of soil and its life forms was still not understood. In 1856, J. Thomas Way discovered that ammonia contained in fertilisers was transformed into nitrates, and twenty years later
Robert Warington Robert Warington FRS (7 September 1807 – 17 November 1867) was an English chemist considered the driving force behind the creation of the world's first enduring chemistry society, The Chemical Society of London, which later became the Royal Soci ...
proved that this transformation was done by living organisms. In 1890
Sergei Winogradsky Sergei Nikolaievich Winogradsky (or Vinohradsky; published under the name of Sergius Winogradsky or M. S. Winogradsky from Ukrainian Mykolayovych Serhiy; uk, Сергій Миколайович Виноградський; 1 September 1856 – ...
announced he had found the bacteria responsible for this transformation. It was known that certain
legume A legume () is a plant in the family Fabaceae (or Leguminosae), or the fruit or seed of such a plant. When used as a dry grain, the seed is also called a pulse. Legumes are grown agriculturally, primarily for human consumption, for livestock f ...
s could take up nitrogen from the air and fix it to the soil but it took the development of bacteriology towards the end of the 19th century to lead to an understanding of the role played in nitrogen fixation by bacteria. The symbiosis of bacteria and leguminous roots, and the fixation of nitrogen by the bacteria, were simultaneously discovered by the German agronomist
Hermann Hellriegel Hermann Hellriegel (October 21, 1831 – September 24, 1895) was a German agricultural chemist who discovered that leguminous plants assimilate the free nitrogen of the atmosphere. Biography He was born at Mausitz (now part of Zwenkau), in t ...
and the Dutch microbiologist Martinus Beijerinck. Crop rotation, mechanisation, chemical and natural fertilisers led to a doubling of wheat yields in western Europe between 1800 and 1900.


Studies of soil formation

The scientists who studied the soil in connection with agricultural practices had considered it mainly as a static substrate. However, soil is the result of evolution from more ancient geological materials, under the action of biotic and abiotic processes. After studies of the improvement of the soil commenced, other researchers began to study soil genesis and as a result also soil types and classifications. In 1860, while in Mississippi,
Eugene W. Hilgard Eugene Woldemar Hilgard (January 5, 1833, Zweibrücken, Rhineland-Palatinate, Germany – January 8, 1916, Berkeley, California, United States) was a German-American expert on pedology (the study of soil resources). An authority on climate as a pe ...
(1833–1916) studied the relationship between rock material, climate, vegetation, and the type of soils that were developed. He realised that the soils were dynamic, and considered the classification of soil types. Unfortunately, his work was not continued. At about the same time,
Friedrich Albert Fallou Friedrich Albert Fallou (1794–1877) was the German founder of modern soil science. While working as a lawyer and tax assessor, Fallou established himself as an independent scientist, a recognized authority in the natural history of farm and fo ...
was describing soil profiles and relating soil characteristics to their formation as part of his professional work evaluating forest and farm land for the principality of Saxony. His 1857 book, (First principles of soil science) established modern soil science. Contemporary with Fallou's work, and driven by the same need to accurately assess land for equitable taxation, Vasily Dokuchaev led a team of soil scientists in Russia who conducted an extensive survey of soils, observing that similar basic rocks, climate and vegetation types lead to similar soil layering and types, and established the concepts for soil classifications. Due to language barriers, the work of this team was not communicated to western Europe until 1914 through a publication in German by
Konstantin Glinka Konstantin Dmitrievich Glinka (russian: Константи́н Дми́триевич Гли́нка) (1867–1927) was a Russian soil scientist. He was Director of the Agricultural College of Leningrad and Experimental Station, and the first dir ...
, a member of the Russian team.
Curtis F. Marbut Curtis Fletcher Marbut (1863–1935) served as Director of the Soil Survey Division of the U.S. Department of Agriculture from 1913 until his death in 1935. Marbut developed the first formal soil classification scheme for the United States. Marbut ...
, influenced by the work of the Russian team, translated Glinka's publication into English, and, as he was placed in charge of the U.S. National Cooperative Soil Survey, applied it to a national soil classification system.


See also


References


Sources


Bibliography

* * * ** ** ** ** **


Further reading


Soil-Net.com
A free schools-age educational site teaching about soil and its importance. * Adams, J.A. 1986. ''Dirt''. College Station, Texas: Texas A&M University Press * Certini, G., Scalenghe, R. 2006. Soils: Basic concepts and future challenges. Cambridge Univ Press, Cambridge. *
David R. Montgomery David R. Montgomery is a Professor of Earth and Space Sciences at the University of Washington in Seattle, where he is a member of the Quaternary Research Center. Montgomery received his B.S. in geology from Stanford University in 1984, and his ...
, ''Dirt: The Erosion of Civilizations'', * Faulkner, Edward H. 1943. Plowman's Folly. New York, Grosset & Dunlap.
LandIS Free Soilscapes Viewer
Free interactive viewer for the Soils of England and Wales * Jenny, Hans. 1941
Factors of Soil Formation: A System of Quantitative Pedology
* Logan, W.B. 1995. Dirt: The ecstatic skin of the earth. * Mann, Charles C. September 2008. " Our good earth" ''National Geographic Magazine'' * Photographs of sand boils. * Soil Survey Division Staff. 1999. ''Soil survey manual''. Soil Conservation Service. U.S. Department of Agriculture Handbook 18. * Soil Survey Staff. 1975. ''Soil Taxonomy: A basic system of soil classification for making and interpreting soil surveys.'' USDA-SCS Agric. Handb. 436. United States Government Printing Office, Washington, DC.
Soils (Matching suitable forage species to soil type)
Oregon State University * * Janick, Jules. 2002

Purdue University
LandIS Soils Data for England and Wales
a pay source for GIS data on the soils of England and Wales and soils data source; they charge a handling fee to researchers.


External links

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