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Oligotroph
An oligotroph is an organism that can live in an environment that offers very low levels of nutrients. They may be contrasted with copiotrophs, which prefer nutritionally rich environments. Oligotrophs are characterized by slow growth, low rates of metabolism, and generally low population density. Oligotrophic environments are those that offer little to sustain life. These environments include deep oceanic sediments, caves, glacial and polar ice, deep subsurface soil, aquifers, ocean waters, and leached soils. Examples of oligotrophic organisms are the cave-dwelling olm; the bacterium " ''Candidatus'' Pelagibacter communis", which is the most abundant organism in the oceans with an estimated 2 × 1028 individuals in total; and the lichens with their extremely low metabolic rate. Etymologically, the word "oligotroph" is a combination of the Greek adjective ''oligos'' (ὀλίγος) meaning "few" and the adjective ''trophikos'' (τροφικός)) meaning "feeding". Plant adaptatio ...
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Mycorrhiza
  A mycorrhiza (from Greek μύκης ', "fungus", and ῥίζα ', "root"; pl. mycorrhizae, mycorrhiza or mycorrhizas) is a symbiotic association between a fungus and a plant. The term mycorrhiza refers to the role of the fungus in the plant's rhizosphere, its root system. Mycorrhizae play important roles in plant nutrition, soil biology, and soil chemistry. In a mycorrhizal association, the fungus colonizes the host plant's root tissues, either intracellularly as in arbuscular mycorrhizal fungi (AMF or AM), or extracellularly as in ectomycorrhizal fungi. The association is sometimes mutualistic. In particular species or in particular circumstances, mycorrhizae may have a parasitic association with host plants. Definition A mycorrhiza is a symbiotic association between a green plant and a fungus. The plant makes organic molecules such as sugars by photosynthesis and supplies them to the fungus, and the fungus supplies to the plant water and mineral nutrients, such as phosp ...
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Candidatus Pelagibacter Communis
"''Candidatus'' Pelagibacter", with the single species "''Ca.'' P. communis", was isolated in 2002 and given a specific name, although it has not yet been described as required by the bacteriological code. It is an abundant member of the SAR11 clade in the phylum ''Alphaproteobacteria''. SAR11 members are highly dominant organisms found in both salt and fresh water worldwide and were originally known only from their rRNA genes, first identified in the Sargasso Sea in 1990 by Stephen Giovannoni's laboratory at Oregon State University and later found in oceans worldwide. "''Ca.'' P. communis" and its relatives may be the most abundant organisms in the ocean, and quite possibly the most abundant bacteria in the entire world. It can make up about 25% of all microbial plankton cells, and in the summer they may account for approximately half the cells present in temperate ocean surface water. The total abundance of "''Ca.'' P. communis" and relatives is estimated to be about 2 ×&n ...
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Lichen
A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.Introduction to Lichens – An Alliance between Kingdoms
. University of California Museum of Paleontology.
Lichens have properties different from those of their component organisms. They come in many colors, sizes, and forms and are sometimes plant-like, but are not s. They may have tiny, leafless branches (); flat leaf-like structures (

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Root Nodule
Root nodules are found on the roots of plants, primarily legumes, that form a symbiosis with nitrogen-fixing bacteria. Under nitrogen-limiting conditions, capable plants form a symbiotic relationship with a host-specific strain of bacteria known as rhizobia. This process has evolved multiple times within the legumes, as well as in other species found within the Rosid clade. Legume crops include beans, peas, and soybeans. Within legume root nodules, nitrogen gas (N2) from the atmosphere is converted into ammonia (NH3), which is then assimilated into amino acids (the building blocks of proteins), nucleotides (the building blocks of DNA and RNA as well as the important energy molecule ATP), and other cellular constituents such as vitamins, flavones, and hormones. Their ability to fix gaseous nitrogen makes legumes an ideal agricultural organism as their requirement for nitrogen fertilizer is reduced. Indeed, high nitrogen content blocks nodule development as there is no benefit ...
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Organism
In biology, an organism () is any living system that functions as an individual entity. All organisms are composed of cells (cell theory). Organisms are classified by taxonomy into groups such as multicellular animals, plants, and fungi; or unicellular microorganisms such as protists, bacteria, and archaea. All types of organisms are capable of reproduction, growth and development, maintenance, and some degree of response to stimuli. Beetles, squids, tetrapods, mushrooms, and vascular plants are examples of multicellular organisms that differentiate specialized tissues and organs during development. A unicellular organism may be either a prokaryote or a eukaryote. Prokaryotes are represented by two separate domains – bacteria and archaea. Eukaryotic organisms are characterized by the presence of a membrane-bound cell nucleus and contain additional membrane-bound compartments called organelles (such as mitochondria in animals and plants ...
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Chlamydomonas
''Chlamydomonas'' is a genus of green algae consisting of about 150 speciesSmith, G.M. 1955 ''Cryptogamic Botany Volume 1. Algae and Fungi'' McGraw-Hill Book Company Inc of unicellular flagellates, found in stagnant water and on damp soil, in freshwater, seawater, and even in snow as "snow algae". ''Chlamydomonas'' is used as a model organism for molecular biology, especially studies of flagellar motility and chloroplast dynamics, biogenesis, and genetics. One of the many striking features of ''Chlamydomonas'' is that it contains ion channels (channelrhodopsins) that are directly activated by light. Some regulatory systems of ''Chlamydomonas'' are more complex than their homologs in Gymnosperms, with evolutionarily related regulatory proteins being larger and containing additional domains. Molecular phylogeny studies indicated that the traditional genus ''Chlamydomonas'' as defined using morphological data was polyphyletic within Volvocales. Many species were subsequently ...
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Scourfieldia
''Scourfieldia'' is a genus of green algae in the family Scourfieldiaceae. ''Cardiomona'' Korshikov is an invalid synonym. The genus was circumscribed by George Stephen West in J. Bot. vol.50 on page 326 in 1912. The genus name of ''Scourfieldia'' is in honour of David Joseph Scourfield FLS FRMS ISO (1866–1949), who was a British civil servant and biologist known as an authority on the Cladocera. Species ''Scourfieldia'' contains the following species:John, David M., Whitton, Brian A., & Brook, Alan J. (Eds). ''The Freshwater Algal Flora of the British Isles: An Identification Guide to Freshwater and Terrestrial Algae.'' Cambridge, UK: Cambridge University Press, 2005. 286. * ''Scourfieldia caeca'' (Korshikov) J.H.Belcher & Swale, 1963 * ''Scourfieldia complanata'' G. S. West, 1912 * ''Scourfieldia cordiformis'' Takeda, 1916 WoRMS also accepts; * ''Scourfieldia chlorolateralis'' * ''Scourfieldia conica'' * ''Scourfieldia ovata'' * ''Scourfieldia quadrata'' Form ...
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Cryptomonas
''Cryptomonas'' is the name-giving genus of the Cryptomonads established by German biologist Christian Gottfried Ehrenberg in 1831. The algae are common in freshwater habitats and brackish water worldwide and often form blooms in greater depths of lakes. The cells are usually brownish or greenish in color and are characteristic of having a slit-like furrow at the anterior. They are not known to produce any toxins. They are used to feed small zooplankton, which is the food source for small fish in fish farms. Many species of ''Cryptomonas'' can only be identified by DNA sequencing. ''Cryptomonas'' can be found in several marine ecosystems in Australia and South Korea. Etymology ''Cryptomonas'' has the meaning of hidden small flagellates from “crypto” and “monas”. Genome Structure Species within ''Cryptomonas'' contain four genomes: the nuclear, the nucleomorph, the plastid, and mitochondrial genomes. The plastid genome contains 118 kilobase pairs and is a result of o ...
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Ankistrodesmus
''Ankistrodesmus'' is a genus Genus ( plural genera ) is a taxonomic rank used in the biological classification of living and fossil organisms as well as viruses. In the hierarchy of biological classification, genus comes above species and below family. In binomial nom ... of green algae in the family Selenastraceae. Species * '' A. acerosus'' * '' A. acutissimus'' * '' A. amalloides'' * '' A. antarcticus'' * '' A. arcticus'' * '' A. bernardensis'' * '' A. bernardii'' * '' A. caribeum'' * '' A. chlorogonioides'' * '' A. cucumiformis'' * '' A. densus'' * '' A. dulcia'' * '' A. dybowskii'' * '' A. ecsediensis'' * '' A. extensus'' * '' A. falcatus'' * '' A. falciformia'' * '' A. fasciculatus'' * '' A. flexuosus'' * '' A. fractus'' * '' A. fusiformis'' * '' A. gracilis'' * '' A. hindakii'' * '' A. komarekii'' * '' A. lacuster'' * '' A. marinus'' * '' A. minutus'' * '' A. nannoselene'' * '' A. nivalis'' * '' A. pehrii'' * '' A. polymorphus'' * '' A. pseudosabulosum'' * '' ...
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Laterite
Laterite is both a soil and a rock type rich in iron and aluminium and is commonly considered to have formed in hot and wet tropical areas. Nearly all laterites are of rusty-red coloration, because of high iron oxide content. They develop by intensive and prolonged weathering of the underlying parent rock, usually when there are conditions of high temperatures and heavy rainfall with alternate wet and dry periods. Tropical weathering (''laterization'') is a prolonged process of chemical weathering which produces a wide variety in the thickness, grade, chemistry and ore mineralogy of the resulting soils. The majority of the land area containing laterites is between the tropics of Cancer and Capricorn. Laterite has commonly been referred to as a soil type as well as being a rock type. This and further variation in the modes of conceptualizing about laterite (e.g. also as a complete weathering profile or theory about weathering) has led to calls for the term to be abandoned alto ...
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Microbial Loop
The microbial loop describes a trophic pathway where, in aquatic systems, dissolved organic carbon (DOC) is returned to higher trophic levels via its incorporation into bacterial biomass, and then coupled with the classic food chain formed by phytoplankton-zooplankton-nekton. In soil systems, the microbial loop refers to soil carbon. The term microbial loop was coined by Farooq Azam, Tom Fenchel et al. in 1983 to include the role played by bacteria in the carbon and nutrient cycles of the marine environment. In general, dissolved organic carbon (DOC) is introduced into the ocean environment from bacterial lysis, the leakage or exudation of fixed carbon from phytoplankton (e.g., mucilaginous exopolymer from diatoms), sudden cell senescence, sloppy feeding by zooplankton, the excretion of waste products by aquatic animals, or the breakdown or dissolution of organic particles from terrestrial plants and soils. Bacteria in the microbial loop decompose this particulate detritus to u ...
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