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Metallosphaera
In taxonomy, ''Metallosphaera'' is a genus of the Sulfolobaceae.See the NCBI The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The ...br>webpage on Metallosphaera Data extracted from the References Further reading Scientific journals * * * Scientific books * Scientific databases External links ''Metallosphaera'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Archaea genera Thermoproteota {{archaea-stub ...
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Metallosphaera Hakonensis
''Metallosphaera hakonensis'' is a gram-negative, thermoacidophilic archaea discovered in the hot springs of Hakone National Park, Kanagawa, Japan. History ''Metallosphaera hakonensis'' was isolated in 1996 by Takayanagi ''et al.'' from a hot spring in the Hakone National Park in Kanagawa, Japan. Originally classified as a member of the genus '' Sulfolobus'', Kurosawa ''et al.'' determined through genetic testing that the organism belongs to the ''Metallosphaera'' genus in 2003. Takayanagi ''et al.'' determined a 92% similarity with S''ulfolobus'' species; however, Kurosawa ''et al.'' determined a 98% similarity with ''Metallosphaera'' species. Using the more accurate high-performance liquid chromatography method, Kurosawa ''et al.'' also determined a new G+C content (43.29%) that is characteristic of ''Metallosphaera'' species. Isolation Takayanagi ''et al''. collected a water sample from a hot spring in the Hakone National Park in Kanagawa, Japan, with a pH 1.5 and a temperat ...
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Metallosphaera Sedula
''Metallosphaera sedula'' is a species of '' Metallosphaera'' that is originally isolated from a volcanic field in Italy. ''Metallosphaera sedula'' can be roughly translated into “metal mobilizing sphere” with the word “sedulus” meaning busy, describing its efficiency in mobilizing metals. ''M. sedula'' is a highly thermoacidophilic Archaean that is unusually tolerant of heavy metals. Significance Due to its ability to oxidize pyrite (FeS2), ''M. sedula'' has the potential to be used for coal depyritization. With increased awareness of the environmental impact of the combustion of coals, the idea of coal pollution mitigation or “clean coal” was born. While there are several focuses of mitigation, one of which is the removal of impurities, such as sulfur found in pyrite, prior to combustion. The combustion of sulfur leads to the formation of SO2, which has adverse health effects, and contributes to acid rain. Abiotic removal of pyrite from coal is currently the pr ...
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Sulfolobaceae
Sulfolobaceae are a family of the Sulfolobales belonging to the domain Archaea. The family consists of several genera adapted to survive environmental niches with extreme temperature and low pH conditions. Ecology ''Sulfolobaceae'' species are thermophiles, commonly found in hot springs, hydrothermal vents, mudpots, and volcanically active regions, with ''Sulfolobus'' genus found almost anywhere with volcanic activity. ''Sulfolobaceae'' are found in temperatures ranging from 40 to 95 °C. They are found in pH levels between 1 and 6 which makes specific species acidophiles. Certain species, like ''Metallosphaera prunae'', have been found living on smoldering waste material from mines by utilizing a lithoautotrophic metabolism. ''Sulfolobaceae'' are involved in biofilm formation. Analysis of biofilms produced by different species has shown very few regulating proteins in common between these species, thus indicating that multiple different regulatory mechanisms for biofilm ...
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Archaea
Archaea ( ; singular archaeon ) is a domain of single-celled organisms. These microorganisms lack cell nuclei and are therefore prokaryotes. Archaea were initially classified as bacteria, receiving the name archaebacteria (in the Archaebacteria kingdom), but this term has fallen out of use. Archaeal cells have unique properties separating them from the other two domains, Bacteria and Eukaryota. Archaea are further divided into multiple recognized phyla. Classification is difficult because most have not been isolated in a laboratory and have been detected only by their gene sequences in environmental samples. Archaea and bacteria are generally similar in size and shape, although a few archaea have very different shapes, such as the flat, square cells of '' Haloquadratum walsbyi''. Despite this morphological similarity to bacteria, archaea possess genes and several metabolic pathways that are more closely related to those of eukaryotes, notably for the enzymes invo ...
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Thermoproteota
The Thermoproteota (also known as crenarchaea) are archaea that have been classified as a phylum of the Archaea domain. Initially, the Thermoproteota were thought to be sulfur-dependent extremophiles but recent studies have identified characteristic Thermoproteota environmental rRNA indicating the organisms may be the most abundant archaea in the marine environment. Originally, they were separated from the other archaea based on rRNA sequences; other physiological features, such as lack of histones, have supported this division, although some crenarchaea were found to have histones. Until recently all cultured Thermoproteota had been thermophilic or hyperthermophilic organisms, some of which have the ability to grow at up to 113 °C. These organisms stain Gram negative and are morphologically diverse, having rod, cocci, filamentous and oddly-shaped cells. ''Sulfolobus'' One of the best characterized members of the Crenarcheota is '' Sulfolobus solfataricus''. This organism ...
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Thermoprotei
The Thermoprotei is a class of the Thermoproteota. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The ... (NCBI). References Further reading Scientific journals * * * * Scientific books * * Charles External links Archaea classes Thermoproteota {{Archaea-stub ...
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Sulfolobales
In taxonomy, the Sulfolobales are an order of the Thermoprotei. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) DNA transfer Exposure of ''Sulfolobus solfataricus'' to the DNA damaging agents UV-irradiation, bleomycin or Mitomycins, mitomycin C induces cellular aggregation. Other physical stressors, such as pH or temperature shift, do not induce aggregation, suggesting that induction of aggregation is caused specifically by DNA damage. Ajon et al. showed that UV-induced cellular aggregation mediates chromosomal marker exchange with high frequency. Recombination rates exceeded those of uninduced cultures by up to three orders of magnitude. Frols et al. and Ajon et al. hypothesized that the UV-inducible DNA transfer process and subsequent homologous recombinational repair represents an important mechanism to maintain chromosome integrity. This r ...
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Species (biology)
In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour or ecological niche. In addition, paleontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. However, only about 14% of these had been described by 2011. All species (except viruses) are given a two-part name, a "binomial". The first part of a binomial is the genus to which the species belongs. The second part is called the specific name or the specific epithet (in botanical nomenclature, also sometimes in zool ...
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Alpha Taxonomy
In biology, taxonomy () is the scientific study of naming, defining ( circumscribing) and classifying groups of biological organisms based on shared characteristics. Organisms are grouped into taxa (singular: taxon) and these groups are given a taxonomic rank; groups of a given rank can be aggregated to form a more inclusive group of higher rank, thus creating a taxonomic hierarchy. The principal ranks in modern use are domain, kingdom, phylum (''division'' is sometimes used in botany in place of ''phylum''), class, order, family, genus, and species. The Swedish botanist Carl Linnaeus is regarded as the founder of the current system of taxonomy, as he developed a ranked system known as Linnaean taxonomy for categorizing organisms and binomial nomenclature for naming organisms. With advances in the theory, data and analytical technology of biological systematics, the Linnaean system has transformed into a system of modern biological classification intended to reflect the evol ...
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Genus (biology)
Genus ( plural genera ) is a taxonomic rank used in the biological classification of living and fossil organisms as well as viruses. In the hierarchy of biological classification, genus comes above species and below family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. ''Panthera leo'' (lion) and ''Panthera onca'' (jaguar) are two species within the genus '' Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants of an ancestral taxon are grouped together (i.e. phylogenetic analysis should clearly demon ...
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National Center For Biotechnology Information
The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The NCBI is located in Bethesda, Maryland, and was founded in 1988 through legislation sponsored by US Congressman Claude Pepper. The NCBI houses a series of databases relevant to biotechnology and biomedicine and is an important resource for bioinformatics tools and services. Major databases include GenBank for DNA sequences and PubMed, a bibliographic database for biomedical literature. Other databases include the NCBI Epigenomics database. All these databases are available online through the Entrez search engine. NCBI was directed by David Lipman, one of the original authors of the BLAST sequence alignment program and a widely respected figure in bioinformatics. GenBank NCBI had responsibility for making available the GenBank DNA seq ...
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Archaea Genera
Archaea ( ; singular archaeon ) is a domain of single-celled organisms. These microorganisms lack cell nuclei and are therefore prokaryotes. Archaea were initially classified as bacteria, receiving the name archaebacteria (in the Archaebacteria kingdom), but this term has fallen out of use. Archaeal cells have unique properties separating them from the other two domains, Bacteria and Eukaryota. Archaea are further divided into multiple recognized phyla. Classification is difficult because most have not been isolated in a laboratory and have been detected only by their gene sequences in environmental samples. Archaea and bacteria are generally similar in size and shape, although a few archaea have very different shapes, such as the flat, square cells of '' Haloquadratum walsbyi''. Despite this morphological similarity to bacteria, archaea possess genes and several metabolic pathways that are more closely related to those of eukaryotes, notably for the enzymes involved in ...
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