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Asaccharobacter Celatus
''Asaccharobacter celatus'' is a Gram-positive, non-spore-forming and obligately anaerobic bacterium from the genus of Asaccharobacter which has been isolated from a rat caecum in Japan. ''Asaccharobacter celatus'' produces equol and 5-hydroxy equol. In 2018, the genus ''Asaccharobacter ''Asaccharobacter'' is a bacterial genus from the family of Coriobacteriaceae. Up to now there is only one species of this genus known (Asaccharobacter celatus ''Asaccharobacter celatus'' is a Gram-positive, non- spore-forming and obligatel ...'' was transferred into the genus '' Aldercreutzia'' based on branching patterns observed in phylogenetic trees. The correct nomenclature is ''Adlercreutzia'' ''equolifaciens'' subsp. ''celatus.'' References Further reading * External linksType strain of ''Asaccharobacter celatus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Actinomycetota Bacteria described in 2008 {{actinobacteria-stub ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Actinomycetota
The ''Actinomycetota'' (or ''Actinobacteria'') are a phylum of all gram-positive bacteria. They can be terrestrial or aquatic. They are of great economic importance to humans because agriculture and forests depend on their contributions to soil systems. In soil they help to decompose the organic matter of dead organisms so the molecules can be taken up anew by plants. While this role is also played by fungi, ''Actinomycetota'' are much smaller and likely do not occupy the same ecological niche. In this role the colonies often grow extensive mycelia, like a fungus would, and the name of an important order of the phylum, '' Actinomycetales'' (the actinomycetes), reflects that they were long believed to be fungi. Some soil actinomycetota (such as ''Frankia'') live symbiotically with the plants whose roots pervade the soil, fixing nitrogen for the plants in exchange for access to some of the plant's saccharides. Other species, such as many members of the genus '' Mycobacterium'', ar ...
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Coriobacteriia
The ''Coriobacteriia'' are a class of Gram-positive bacteria within the Actinomycetota phylum.Ludwig, W., Euzéby, J., Schumann, P., Busse, H. J., Trujillo, M. E.,Kämpfer, P. & Whitman, W. B. (2012). Road map of the phylum Actinobacteria. In: Bergey's Manual of Systematic Bacteriology, pp. 1–28. Eds. M. Goodfellow, P. Ka¨mpfer, H. J. Busse, M. E. Trujillo, K. Suzuki, W. Ludwig & W. B. Whitman. Springer-:New YorkClavel T, Lepage P & Charrier C. (2014). The family Coriobacteriaceae. In: The Prokaryotes, pp. 201-238. Springer-:Berlin Heidelberg Species within this group are nonsporulating, strict or facultative anaerobes that are capable of thriving in a diverse set of ecological niches. '' Gordonibacter'' species are the only members capable of motility by means of flagella within the class. Several species within the ''Coriobacteriia'' class have been implicated with human diseases that range in severity. '' Atopobium'', '' Olsenella'', and ''Cryptobacterium'' species have resp ...
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Eggerthellales
The ''Eggerthellaceae'' are a family of Gram-positive, rod- or coccus-shaped Actinomycetota. It is the sole family within the order ''Eggerthellales.'' The name ''Eggerthellaceae'' is derived from the Latin term ''Eggerthella,'' referring to the type genus of the family and the suffix "-ceae," an ending used to denote a family. Together, ''Eggerthellaceae'' refers to a family whose nomenclatural type is the genus ''Eggerthella''. Biochemical characteristics and molecular signatures Members of this family are mostly anaerobic, non-motile (with the exception of some ''Gordonibacter'' and ''Senegalimassilia'' species that exhibit motility), asaccharolytic and do not form spores. ''Eggerthellaceae'' species are commonly isolated from human and animal faeces and other human sources such as the colon, vagina, oral cavity and blood. Some species have also been isolated from human samples of periodontal or endodontic infections, Crohn's disease and severe blood bacteremia. The G+C co ...
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Eggerthellaceae
The ''Eggerthellaceae'' are a family of Gram-positive, rod- or coccus-shaped Actinomycetota. It is the sole family within the order ''Eggerthellales.'' The name ''Eggerthellaceae'' is derived from the Latin term ''Eggerthella,'' referring to the type genus of the family and the suffix "-ceae," an ending used to denote a family. Together, ''Eggerthellaceae'' refers to a family whose nomenclatural type is the genus ''Eggerthella''. Biochemical characteristics and molecular signatures Members of this family are mostly anaerobic, non-motile (with the exception of some ''Gordonibacter'' and ''Senegalimassilia'' species that exhibit motility), asaccharolytic and do not form spores. ''Eggerthellaceae'' species are commonly isolated from human and animal faeces and other human sources such as the colon, vagina, oral cavity and blood. Some species have also been isolated from human samples of periodontal or endodontic infections, Crohn's disease and severe blood bacteremia. The G+C co ...
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Asaccharobacter
''Asaccharobacter'' is a bacterial genus from the family of Coriobacteriaceae. Up to now there is only one species of this genus known (Asaccharobacter celatus ''Asaccharobacter celatus'' is a Gram-positive, non- spore-forming and obligately anaerobic Anaerobic means "living, active, occurring, or existing in the absence of free oxygen", as opposed to aerobic which means "living, active, or occurring ...). In 2018, Nouioui ''et al.'' proposed merging the genus ''Asaccharobacter'' within the genus '' Aldercreutzia'' based on observed clustering of these genera within phylogenetic trees. The correct nomenclature for the sole species of this genus is now ''Adlercreutzia'' ''equolifaciens'' subsp. ''celatus.'' References Further reading * * Actinomycetota Monotypic bacteria genera Bacteria genera {{Actinobacteria-stub ...
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LPSN
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes The International Code of Nomenclature of Prokaryotes (ICNP) formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC) governs the scientific names for Bacteria and Archaea.P. H. A. Sneath, 2003. A short hist .... The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service. References External links List of Prokaryotic names with Standing in Nomenclature
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Gram-positive
In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. Gram-positive bacteria take up the crystal violet stain used in the test, and then appear to be purple-coloured when seen through an optical microscope. This is because the thick peptidoglycan layer in the bacterial cell wall retains the stain after it is washed away from the rest of the sample, in the decolorization stage of the test. Conversely, gram-negative bacteria cannot retain the violet stain after the decolorization step; alcohol used in this stage degrades the outer membrane of gram-negative cells, making the cell wall more porous and incapable of retaining the crystal violet stain. Their peptidoglycan layer is much thinner and sandwiched between an inner cell membrane and a bacterial outer membrane, causing them to take up the counterstain (saf ...
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Spore
In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, fungi and protozoa. Bacterial spores are not part of a sexual cycle, but are resistant structures used for survival under unfavourable conditions. Myxozoan spores release amoeboid infectious germs ("amoebulae") into their hosts for parasitic infection, but also reproduce within the hosts through the pairing of two nuclei within the plasmodium, which develops from the amoebula. In plants, spores are usually haploid and unicellular and are produced by meiosis in the sporangium of a diploid sporophyte. Under favourable conditions the spore can develop into a new organism using mitotic division, producing a multicellular gametophyte, which eventually goes on to produce gametes. Two gametes fuse to form a zygote which develops into a new s ...
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Anaerobic Organism
An anaerobic organism or anaerobe is any organism that does not require molecular oxygen for growth. It may react negatively or even die if free oxygen is present. In contrast, an aerobic organism (aerobe) is an organism that requires an oxygenated environment. Anaerobes may be unicellular (e.g. protozoans, bacteria) or multicellular. Most fungi are obligate aerobes, requiring oxygen to survive. However, some species, such as the Chytridiomycota that reside in the rumen of cattle, are obligate anaerobes; for these species, anaerobic respiration is used because oxygen will disrupt their metabolism or kill them. Deep waters of the ocean are a common anoxic environment. First observation In his letter of 14 June 1680 to The Royal Society, Antonie van Leeuwenhoek described an experiment he carried out by filling two identical glass tubes about halfway with crushed pepper powder, to which some clean rain water was added. Van Leeuwenhoek sealed one of the glass tubes using a flame an ...
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Japan
Japan ( ja, 日本, or , and formally , ''Nihonkoku'') is an island country in East Asia. It is situated in the northwest Pacific Ocean, and is bordered on the west by the Sea of Japan, while extending from the Sea of Okhotsk in the north toward the East China Sea, Philippine Sea, and Taiwan in the south. Japan is a part of the Ring of Fire, and spans Japanese archipelago, an archipelago of List of islands of Japan, 6852 islands covering ; the five main islands are Hokkaido, Honshu (the "mainland"), Shikoku, Kyushu, and Okinawa Island, Okinawa. Tokyo is the Capital of Japan, nation's capital and largest city, followed by Yokohama, Osaka, Nagoya, Sapporo, Fukuoka, Kobe, and Kyoto. Japan is the List of countries and dependencies by population, eleventh most populous country in the world, as well as one of the List of countries and dependencies by population density, most densely populated and Urbanization by country, urbanized. About three-fourths of Geography of Japan, the c ...
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Equol
Equol (4',7-isoflavandiol) is an isoflavandiolThe structures of 7,4’-dihydroxy-isoflavan and its precursors is shown iStructural Elucidation of Hydroxylated Metabolites of the Isoflavan Equol by GC/MS and HPLC/MSby Corinna E. Rüfer, Hansruedi Glatt, and Sabine E. Kulling in ''Drug Metabolism and Disposition'' (2005, electronic publication). estrogen metabolized from daidzein, a type of isoflavone found in soybeans and other plant sources, by bacterial flora in the intestines. While endogenous estrogenic hormones such as estradiol are steroids, equol is a nonsteroidal estrogen. Only about 30–50% of people have intestinal bacteria that make equol. History (''S'')-Equol was first isolated from horse urine in 1932, and the name was suggested by this equine connection. Since then, equol has been found in the urine or plasma of many other animal species, although these animals have significant differences in their ability to metabolize daidzein into equol. In 1980, scientists repo ...
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