Haplogroup S (Y-DNA)
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Haplogroup S (Y-DNA)
Haplogroup S also known as S-B254 is a human Y-DNA haplogroup, defined by the SNPs B254 and Z33355.International Society of Genetic Genealogy (ISOGG; 2017), ''Y-DNA Haplogroup Tree 2015''
(24 March 2017).
Until 2016, it was known as Haplogroup S1. S-M254 is the most common haplogroup among males in the Papua New Guinea Highlands. It is also relatively common in some parts of , and among

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Oceania
Oceania (, , ) is a region, geographical region that includes Australasia, Melanesia, Micronesia, and Polynesia. Spanning the Eastern Hemisphere, Eastern and Western Hemisphere, Western hemispheres, Oceania is estimated to have a land area of and a population of around 44.5 million as of 2021. When compared with (and sometimes described as being one of) the continents, the region of Oceania is the smallest in land area and the list of continents and continental subregions by population, second least populated after Antarctica. Its major population centres are Sydney, Melbourne, Brisbane, Perth, Auckland, Adelaide, Honolulu, and Christchurch. Oceania has a diverse mix of economies from the developed country, highly developed and globally competitive market economy, financial markets of Australia, French Polynesia, Hawaii, Hawaii, New Caledonia, and New Zealand, which rank high in quality of life and Human Development Index, to the much least developed countries, less developed ...
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Haplogroup K2b1 (Y-DNA)
Haplogroup K2b1, known sometimes as haplogroup MS, is a human Y-DNA haplogroup, defined by SNPs P397 and P399. It has a complex, diverse and not-yet fully understood internal structure; its downstream descendants include the major haplogroups Haplogroup M (P256) and Haplogroup S (M230). It is not clear at present whether the basal paragroup K2b1* is carried by any living males. Individuals carrying subclades of K2b1 are found primarily among Papuan peoples, Micronesian peoples, indigenous Australians, and Polynesians. It is also carried by Negrito and Melanesian minorities in The Philippines as well as Indonesia. Structure K2b1 is a direct descendant of K2b – known previously as Haplogroup MPS. Its only primary branches are the major haplogroups S (B254), also known as K2b1a (and previously known as Haplogroup S1 or K2b1a4) and M (P256), also known as K2b1b (previously K2b1d). Distribution K2b1 is strongly associated with the indigenous peoples of Melanesia (especi ...
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Haplogroup S1 (Y-DNA)
A haplotype is a group of alleles in an organism that are inherited together from a single parent, and a haplogroup ( haploid from the el, ἁπλοῦς, ''haploûs'', "onefold, simple" and en, group) is a group of similar haplotypes that share a common ancestor with a single-nucleotide polymorphism mutation. More specifically, a haplogroup is a combination of alleles at different chromosomal regions that are closely linked and that tend to be inherited together. As a haplogroup consists of similar haplotypes, it is usually possible to predict a haplogroup from haplotypes. Haplogroups pertain to a single line of descent. As such, membership of a haplogroup, by any individual, relies on a relatively small proportion of the genetic material possessed by that individual. Each haplogroup originates from, and remains part of, a preceding single haplogroup (or paragroup). As such, any related group of haplogroups may be precisely modelled as a nested hierarchy, in which each set (h ...
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Haplogroup S2 (Y-DNA)
A haplotype is a group of alleles in an organism that are inherited together from a single parent, and a haplogroup (haploid from the el, ἁπλοῦς, ''haploûs'', "onefold, simple" and en, group) is a group of similar haplotypes that share a common ancestor with a single-nucleotide polymorphism mutation. More specifically, a haplogroup is a combination of alleles at different chromosomal regions that are closely linked and that tend to be inherited together. As a haplogroup consists of similar haplotypes, it is usually possible to predict a haplogroup from haplotypes. Haplogroups pertain to a single line of descent. As such, membership of a haplogroup, by any individual, relies on a relatively small proportion of the genetic material possessed by that individual. Each haplogroup originates from, and remains part of, a preceding single haplogroup (or paragroup). As such, any related group of haplogroups may be precisely modelled as a nested hierarchy, in which each set (hapl ...
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Human Y-chromosome DNA Haplogroup
In human genetics, a human Y-chromosome DNA haplogroup is a haplogroup defined by mutations in the non- recombining portions of DNA from the male-specific Y chromosome (called Y-DNA). Many people within a haplogroup share similar numbers of short tandem repeats (STRs) and types of mutations called single-nucleotide polymorphisms (SNPs). The human Y-chromosome accumulates roughly two mutations per generation. "one mutation in every 30 million base pairs" Y-DNA haplogroups represent major branches of the Y-chromosome phylogenetic tree that share hundreds or even thousands of mutations unique to each haplogroup. The Y-chromosomal most recent common ancestor (Y-MRCA, informally known as Y-chromosomal Adam) is the most recent common ancestor (MRCA) from whom all currently living humans are descended patrilineally. Y-chromosomal Adam is estimated to have lived roughly 236,000 years ago in Africa. By examining other bottlenecks most Eurasian men (men from populations outside of Afri ...
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Single-nucleotide Polymorphism
In genetics, a single-nucleotide polymorphism (SNP ; plural SNPs ) is a germline substitution of a single nucleotide at a specific position in the genome. Although certain definitions require the substitution to be present in a sufficiently large fraction of the population (e.g. 1% or more), many publications do not apply such a frequency threshold. For example, at a specific base position in the human genome, the G nucleotide may appear in most individuals, but in a minority of individuals, the position is occupied by an A. This means that there is a SNP at this specific position, and the two possible nucleotide variations – G or A – are said to be the alleles for this specific position. SNPs pinpoint differences in our susceptibility to a wide range of diseases, for example age-related macular degeneration (a common SNP in the CFH gene is associated with increased risk of the disease) or nonalcoholic fatty liver disease (a SNP in the PNPLA3 gene is associated with inc ...
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New Guinea Highlands
The New Guinea Highlands, also known as the Central Range or Central Cordillera, is a long chain of mountain ranges on the island of New Guinea, including the island's tallest peak, Puncak Jaya , the highest mountain in Oceania. The range is home to many intermountain river valleys, many of which support thriving agricultural communities. The highlands run generally east-west the length of the island, which is divided politically between Indonesia in the west and Papua New Guinea in the east. Geography The Central Cordillera, some peaks of which are capped with ice, consists of (from east to west): the Central Highlands and Eastern Highlands of Papua New Guinea including the Owen Stanley Range in the southeast, whose highest peak is Mount Victoria at 4,038 metres (13,248 feet), the Albert Victor Mountains, the Sir Arthur Gordon Range, and the Bismarck Range, whose highest peak is Mount Wilhelm at 4,509 metres (14,793 feet), which is an extinct volcano with a crater lake; the Star ...
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Wallacea
Wallacea is a biogeographical designation for a group of mainly Indonesian islands separated by deep-water straits from the Asian and Australian continental shelves. Wallacea includes Sulawesi, the largest island in the group, as well as Lombok, Sumbawa, Flores, Sumba, Timor, Halmahera, Buru, Seram, and many smaller islands. The islands of Wallacea lie between the Sunda Shelf (the Malay Peninsula, Sumatra, Borneo, Java, and Bali) to the west, and the Sahul Shelf including Australia and New Guinea to the south and east. The total land area of Wallacea is . Geography Wallacea is defined as the series of islands stretching between the two continental shelves of Sunda and Sahul, but excluding the Philippines. Its eastern border (separating Wallacea from Sahul) is represented by a zoogeographical boundary known as Lydekker's Line, while the Wallace Line (separating Wallacea from Sunda) defines its western border. The Weber Line is the midpoint, at which Asian and Australian ...
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Indigenous Australians
Indigenous Australians or Australian First Nations are people with familial heritage from, and membership in, the ethnic groups that lived in Australia before British colonisation. They consist of two distinct groups: the Aboriginal peoples of the Australian mainland and Tasmania, and the Torres Strait Islander peoples from the seas between Queensland and Papua New Guinea. The term Aboriginal and Torres Strait Islander peoples or the person's specific cultural group, is often preferred, though the terms First Nations of Australia, First Peoples of Australia and First Australians are also increasingly common; 812,728 people self-identified as being of Aboriginal and/or Torres Strait Islander origin in the 2021 Australian Census, representing 3.2% of the total population of Australia. Of these indigenous Australians, 91.4% identified as Aboriginal; 4.2% identified as Torres Strait Islander; while 4.4% identified with both groups.
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Haplogroup S-M230
Haplogroup S-M230, also known as S1a1b (and previously as S* or K2b1a4), is a Y-chromosome DNA haplogroup. It is by far the most numerically significant subclade of Haplogroup S1a (and its sole primary subclade, Haplogroup S-P405). S-M230 is commonly found among populations of the highlands of Papua New Guinea . It is also found at lower frequencies in adjacent parts of Indonesia and Melanesia. ( ) Origin Distribution One study has reported finding haplogroup S-M230 in: 52% (16/31) of a sample from the Papua New Guinea (PNG) Highlands; 21% (7/34) of a sample from the Moluccas; 16% (5/31) of a sample from the Papua New Guinea coast; 12.5% (2/16) of a sample of Tolai from New Britain; 10% (3/31) of a sample from Nusa Tenggara, and; 2% (2/89) of a sample from the West New Guinea lowlands/coast.( ) One subclade, Haplogroup S-M226.1 (S1a1b1d1a; previously S1d) has been found at low frequencies in the Admiralty Islands and along the coast of mainland PNG. . Phylogenetics Str ...
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Basal (phylogenetics)
In phylogenetics, basal is the direction of the ''base'' (or root) of a phylogenetic tree#Rooted tree, rooted phylogenetic tree or cladogram. The term may be more strictly applied only to nodes adjacent to the root, or more loosely applied to nodes regarded as being close to the root. Note that extant taxa that lie on branches connecting directly to the root are not more closely related to the root than any other extant taxa. While there must always be two or more equally "basal" clades sprouting from the root of every cladogram, those clades may differ widely in taxonomic rank, Phylogenetic diversity, species diversity, or both. If ''C'' is a basal clade within ''D'' that has the lowest rank of all basal clades within ''D'', ''C'' may be described as ''the'' basal taxon of that rank within ''D''. The concept of a 'key innovation' implies some degree of correlation between evolutionary innovation and cladogenesis, diversification. However, such a correlation does not make a given ca ...
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