Sclerotrema
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Sclerotrema
''Sclerotrema'' is a genus of fungi in the family Auriculariaceae. The type and only species, ''Sclerotrema griseobrunnea'', produces effused, corticioid basidiocarps (fruit bodies) on wood with a smooth surface. The species was originally described from Russia and is also known from Canada. Taxonomy The genus was created as a result of molecular research, based on cladistic analysis of DNA sequences, which showed that ''Sclerotrema griseobrunnea'', previously referred to the genus ''Exidiopsis ''Exidiopsis'' is a genus of fungi in the family Auriculariaceae. The genus has a widespread distribution and contains around 30 species. One species, '' Exidiopsis effusa'', is responsible for the formation of hair ice Hair ice, also known a ...'', formed its own unrelated and distinct clade. References {{Reflist, 1, refs= {{cite journal , vauthors=Malysheva V, Spirin V , year=2017 , title=Taxonomy and phylogeny of the Auriculariales (Agaricomycetes, Basidiomycota) with stereoid ...
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Auriculariaceae
The Auriculariaceae are a family of fungi in the order Auriculariales. Species within the family were formerly referred to the "heterobasidiomycetes" or "jelly fungi", since many have gelatinous basidiocarps (fruit bodies) that produce spores on septate basidia. Around 100 species are known worldwide. All are believed to be saprotrophic, most growing on dead wood. Fruit bodies of several ''Auricularia'' species are cultivated for food on a commercial scale, especially in China. Taxonomy History The family was established in 1897 by German mycologist Gustav Lindau to accommodate species of fungi having "gymnocarpous" basidiocarps (with the hymenium exposed) and "auricularioid" basidia (more or less cylindrical basidia with lateral septa). It included not only the genus ''Auricularia'', but also '' Platygloea'', '' Jola'', '' Saccoblastia'', and ''Stypinella'' (= '' Helicobasidium''). In 1922, British mycologist Carleton Rea recognized the family as containing the genera ''Auricu ...
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Genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus comes above species and below family (taxonomy), family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. ''Panthera leo'' (lion) and ''Panthera onca'' (jaguar) are two species within the genus ''Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomy (biology), taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants ...
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Fungi
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from the other eukaryotic kingdoms, which by one traditional classification include Plantae, Animalia, Protozoa, and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related organisms, named the ''Eumycota'' (''t ...
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Family (biology)
Family ( la, familia, plural ') is one of the eight major hierarchical taxonomic ranks in Linnaean taxonomy. It is classified between order and genus. A family may be divided into subfamilies, which are intermediate ranks between the ranks of family and genus. The official family names are Latin in origin; however, popular names are often used: for example, walnut trees and hickory trees belong to the family Juglandaceae, but that family is commonly referred to as the "walnut family". What belongs to a family—or if a described family should be recognized at all—are proposed and determined by practicing taxonomists. There are no hard rules for describing or recognizing a family, but in plants, they can be characterized on the basis of both vegetative and reproductive features of plant species. Taxonomists often take different positions about descriptions, and there may be no broad consensus across the scientific community for some time. The publishing of new data and opini ...
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Type Species
In zoological nomenclature, a type species (''species typica'') is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the species that contains the biological type specimen(s). Article 67.1 A similar concept is used for suprageneric groups and called a type genus. In botanical nomenclature, these terms have no formal standing under the code of nomenclature, but are sometimes borrowed from zoological nomenclature. In botany, the type of a genus name is a specimen (or, rarely, an illustration) which is also the type of a species name. The species name that has that type can also be referred to as the type of the genus name. Names of genus and family ranks, the various subdivisions of those ranks, and some higher-rank names based on genus names, have such types.
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Species
In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour or ecological niche. In addition, paleontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. However, only about 14% of these had been described by 2011. All species (except viruses) are given a two-part name, a "binomial". The first part of a binomial is the genus to which the species belongs. The second part is called the specific name or the specific epithet (in botanical nomenclature, also sometimes i ...
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Corticioid
The corticioid fungi are a group of fungi in the Basidiomycota typically having effused, smooth basidiocarps (fruit bodies) that are formed on the undersides of dead tree trunks or branches. They are sometimes colloquially called crust fungi or patch fungi. Originally such fungi were referred to the genus '' Corticium'' ("corticioid" means ''Corticium''-like) and subsequently to the family ''Corticiaceae'', but it is now known that all corticioid species are not necessarily closely related. The fact that they look similar is an example of convergent evolution. Since they are often studied as a group, it is convenient to retain the informal (non-taxonomic) name of "corticioid fungi" and this term is frequently used in research papersLarsson K-H, Larsson E, Koljalg U. (2004). High phylogenetic diversity among corticioid homobasidiomycetes. ''Mycological Research'' 108: 983–1002. and other texts. History The genus ''Corticium'' was established by Persoon in 1794 for fungi having smo ...
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Basidiocarps
In fungi, a basidiocarp, basidiome, or basidioma () is the sporocarp (fungi), sporocarp of a basidiomycota, basidiomycete, the Multicellular organism, multicellular structure on which the spore-producing hymenium is borne. Basidiocarps are characteristic of the hymenomycetes; Urediniomycetes, rusts and Ustilaginomycetes, smuts do not produce such structures. As with other sporocarps, epigeous (above-ground) basidiocarps that are visible to the naked eye (especially those with a more or less agaricoid morphology) are commonly referred to as mushrooms, while hypogeous (underground) basidiocarps are usually called false truffles. Structure All basidiocarps serve as the structure on which the hymenium is produced. Basidia are found on the surface of the hymenium, and the basidia ultimately produce spores. In its simplest form, a basidiocarp consists of an undifferentiated fruiting structure with a hymenium on the surface; such a structure is characteristic of many simple jelly fungi, ...
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Molecular Phylogenetics
Molecular phylogenetics () is the branch of phylogeny that analyzes genetic, hereditary molecular differences, predominantly in DNA sequences, to gain information on an organism's evolutionary relationships. From these analyses, it is possible to determine the processes by which diversity among species has been achieved. The result of a molecular phylogenetic analysis is expressed in a phylogenetic tree. Molecular phylogenetics is one aspect of molecular systematics, a broader term that also includes the use of molecular data in taxonomy and biogeography. Molecular phylogenetics and molecular evolution correlate. Molecular evolution is the process of selective changes (mutations) at a molecular level (genes, proteins, etc.) throughout various branches in the tree of life (evolution). Molecular phylogenetics makes inferences of the evolutionary relationships that arise due to molecular evolution and results in the construction of a phylogenetic tree. History The theoretical frame ...
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Cladistic
Cladistics (; ) is an approach to biological classification in which organisms are categorized in groups (" clades") based on hypotheses of most recent common ancestry. The evidence for hypothesized relationships is typically shared derived characteristics ( synapomorphies'')'' that are not present in more distant groups and ancestors. However, from an empirical perspective, common ancestors are inferences based on a cladistic hypothesis of relationships of taxa whose character states can be observed. Theoretically, a last common ancestor and all its descendants constitute a (minimal) clade. Importantly, all descendants stay in their overarching ancestral clade. For example, if the terms ''worms'' or ''fishes'' were used within a ''strict'' cladistic framework, these terms would include humans. Many of these terms are normally used paraphyletically, outside of cladistics, e.g. as a 'grade', which are fruitless to precisely delineate, especially when including extinct species. R ...
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DNA Sequences
A nucleic acid sequence is a succession of bases signified by a series of a set of five different letters that indicate the order of nucleotides forming alleles within a DNA (using GACT) or RNA (GACU) molecule. By convention, sequences are usually presented from the 5' end to the 3' end. For DNA, the sense strand is used. Because nucleic acids are normally linear (unbranched) polymers, specifying the sequence is equivalent to defining the covalent structure of the entire molecule. For this reason, the nucleic acid sequence is also termed the primary structure. The sequence has capacity to represent information. Biological deoxyribonucleic acid represents the information which directs the functions of an organism. Nucleic acids also have a secondary structure and tertiary structure. Primary structure is sometimes mistakenly referred to as ''primary sequence''. Conversely, there is no parallel concept of secondary or tertiary sequence. Nucleotides Nucleic acids consis ...
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Exidiopsis
''Exidiopsis'' is a genus of fungi in the family Auriculariaceae. The genus has a widespread distribution and contains around 30 species. One species, '' Exidiopsis effusa'', is responsible for the formation of hair ice Hair ice, also known as ice wool or frost beard, is a type of ice that forms on dead wood and takes the shape of fine, silky hair. It is somewhat uncommon, and has been reported mostly at latitudes between 45 and 55 °N in broadleaf forest ... on dead wood. Species *'' Exidiopsis albopruinata'' *'' Exidiopsis alliciens'' *'' Exidiopsis badia'' *'' Exidiopsis banlaensis'' *'' Exidiopsis calcea'' *'' Exidiopsis cartilaginea'' *'' Exidiopsis citrina'' *'' Exidiopsis diversa'' *'' Exidiopsis effusa'' *'' Exidiopsis endoramifera'' *'' Exidiopsis galzinii'' *'' Exidiopsis griseobrunnea'' *'' Exidiopsis gypsea'' *'' Exidiopsis jianfengensis'' *'' Exidiopsis leucophaea'' *'' Exidiopsis macroacantha'' *'' Exidiopsis molybdea'' *'' Exidiopsis mucedinea'' *'' Exidi ...
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