MNE-Python
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MNE-Python
MNE-Python (''"MNE"'') is an open source toolbox for EEG and MEG signal processing. It is written in Python and is available from the PyPI package repository. See also * Neurophysiological Biomarker Toolbox ''(MatLab)'' * EEGLAB ''(MatLab)'' * NeuroKit NeuroKit (''"nk"'') is an open source toolbox for physiological signal processing. The most recent version, ''NeuroKit2'', is written in Python and is available from the PyPI package repository. As of June 2022, the software was used in 94 scient ... ''(Python)'' References {{science-software-stub Python (programming language) scientific libraries Neuroimaging software ...
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Neurophysiological Biomarker Toolbox
The Neurophysiological Biomarker Toolbox (NBT) is an open source MATLAB toolbox for the computation and integration of neurophysiological biomarkers (e.g., biomarkers based on EEG or MEG recordings). The NBT toolbox has so far been used in seven peer-reviewed research articles, and has a broad user base of more than 1000 users. The NBT toolbox provides unique features for analysis of resting-state EEG or MEG recordings. NBT offers a pipeline from data storage to statistics including artifact rejection, signal visualization, biomarker computation, statistical testing, and biomarker databasing. NBT allows for easy implementation of new biomarkers, and incorporates an online wiki (the NBTwiki) that aims at facilitating collaboration among NBT users including extensive help and tutorials. The standardised way of data storage and analysis that NBT proposes allow different research projects to merge, compare, or share their data and biomarker algorithms. Features Neuronal oscilla ...
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EEGLAB
EEGLAB is a MATLAB toolbox distributed under the free BSD license for processing data from electroencephalography (EEG), magnetoencephalography (MEG), and other electrophysiological signals. Along with all the basic processing tools, EEGLAB implements independent component analysis (ICA), time/frequency analysis, artifact rejection, and several modes of data visualization. EEGLAB allows users to import their electrophysiological data in about 20 binary file formats, preprocess the data, visualize activity in single trials, and perform ICA. Artifactual ICA components may be subtracted from the data. Alternatively, ICA components representing brain activity may be further processed and analyzed. EEGLAB also allows users to group data from several subjects, and to cluster their independent components. History In 1997, a set of data processing functions was first released on the Internet by Scott Makeig in the Computational Neurobiology Laboratory directed by Terry Sejnowski at the Salk ...
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NeuroKit
NeuroKit (''"nk"'') is an open source toolbox for physiological signal processing. The most recent version, ''NeuroKit2'', is written in Python and is available from the PyPI package repository. As of June 2022, the software was used in 94 scientific publications. NeuroKit2 is presented as one of the most popular and contributor-friendly open-source software for neurophysiology based on the number of downloads, the number of contributors, and other GitHub metrics. History The first version of ''NeuroKit'' was created as a PhD side-project of Dominique Makowski in 2017. It was officially deprecated in 2020 and has been replaced by the current version, ''NeuroKit2''. A few major updates have been released since: * February 08, 2021: The 0.1.0 release coincides with the first publication of the software. * May 18, 2022: The 0.2.0 release coincides with an overhaul of the documentation. Features NeuroKit2 includes tools to work with cardiac activity from electrocardiography (ECG ...
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Python (programming Language)
Python is a high-level, general-purpose programming language. Its design philosophy emphasizes code readability with the use of significant indentation. Python is dynamically-typed and garbage-collected. It supports multiple programming paradigms, including structured (particularly procedural), object-oriented and functional programming. It is often described as a "batteries included" language due to its comprehensive standard library. Guido van Rossum began working on Python in the late 1980s as a successor to the ABC programming language and first released it in 1991 as Python 0.9.0. Python 2.0 was released in 2000 and introduced new features such as list comprehensions, cycle-detecting garbage collection, reference counting, and Unicode support. Python 3.0, released in 2008, was a major revision that is not completely backward-compatible with earlier versions. Python 2 was discontinued with version 2.7.18 in 2020. Python consistently ranks as ...
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Open Source
Open source is source code that is made freely available for possible modification and redistribution. Products include permission to use the source code, design documents, or content of the product. The open-source model is a decentralized software development model that encourages open collaboration. A main principle of open-source software development is peer production, with products such as source code, blueprints, and documentation freely available to the public. The open-source movement in software began as a response to the limitations of proprietary code. The model is used for projects such as in open-source appropriate technology, and open-source drug discovery. Open source promotes universal access via an open-source or free license to a product's design or blueprint, and universal redistribution of that design or blueprint. Before the phrase ''open source'' became widely adopted, developers and producers have used a variety of other terms. ''Open source'' gained ...
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Magnetoencephalography
Magnetoencephalography (MEG) is a functional neuroimaging technique for mapping brain activity by recording magnetic fields produced by electrical currents occurring naturally in the brain, using very sensitive magnetometers. Arrays of SQUIDs (superconducting quantum interference devices) are currently the most common magnetometer, while the SERF (spin exchange relaxation-free) magnetometer is being investigated for future machines. Applications of MEG include basic research into perceptual and cognitive brain processes, localizing regions affected by pathology before surgical removal, determining the function of various parts of the brain, and neurofeedback. This can be applied in a clinical setting to find locations of abnormalities as well as in an experimental setting to simply measure brain activity. History MEG signals were first measured by University of Illinois physicist David Cohen in 1968, before the availability of the SQUID, using a copper induction coil as the d ...
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Python Package Index
The Python Package Index, abbreviated as PyPI () and also known as the Cheese Shop (a reference to the ''Monty Python's Flying Circus'' sketch " Cheese Shop"), is the official third-party software repository for Python. It is analogous to the CPAN repository for Perl and to the CRAN repository for R. PyPI is run by the Python Software Foundation, a charity. Some package managers, including pip, use PyPI as the default source for packages and their dependencies. more than 350,000 Python packages can be accessed through PyPI. PyPI primarily hosts Python packages in the form of archives called (source distributions) or precompiled "wheels." PyPI as an index allows users to search for packages by keywords or by filters against their metadata, such as free software license or compatibility with POSIX. A single entry on PyPI is able to store, aside from just a package and its metadata, previous releases of the package, precompiled wheels (e.g. containing DLLs on Windows), as ...
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Python (programming Language) Scientific Libraries
Python may refer to: Snakes * Pythonidae, a family of nonvenomous snakes found in Africa, Asia, and Australia ** ''Python'' (genus), a genus of Pythonidae found in Africa and Asia * Python (mythology), a mythical serpent Computing * Python (programming language), a widely used programming language * Python, a native code compiler for CMU Common Lisp * Python, the internal project name for the PERQ 3 computer workstation People * Python of Aenus (4th-century BCE), student of Plato * Python (painter), (ca. 360–320 BCE) vase painter in Poseidonia * Python of Byzantium, orator, diplomat of Philip II of Macedon * Python of Catana, poet who accompanied Alexander the Great * Python Anghelo (1954–2014) Romanian graphic artist Roller coasters * Python (Efteling), a roller coaster in the Netherlands * Python (Busch Gardens Tampa Bay), a defunct roller coaster * Python (Coney Island, Cincinnati, Ohio), a steel roller coaster Vehicles * Python (automobile maker), an Australian car co ...
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