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Chattonella
''Chattonella'' is a genus of marine raphidophytes associated with red tides. A technique using monoclonal antibodies can be used to identify the genus, while the RAPD reaction can be used to distinguish between different species within the genus. It includes the species ''Chattonella antiqua'', a bloom forming alga responsible for large scale fish deaths due to the synthesis of toxic compounds related to brevetoxin Brevetoxin (PbTx), or brevetoxins, are a suite of cyclic polyether compounds produced naturally by a species of dinoflagellate known as ''Karenia brevis''. Brevetoxins are neurotoxins that bind to voltage-gated sodium channels in nerve cells, le .... References Heterokont genera Ochrophyta {{Heterokont-stub ...
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Raphidophyceae
The raphidophytes, formally known as Raphidomonadea or Raphidophyceae (formerly referred to as Chloromonadophyceae and Chloromonadineae), are a small group of eukaryotic algae that includes both marine and freshwater species. All raphidophytes are unicellular, with large cells (50 to 100 μm), but no cell walls. Raphidophytes possess a pair of flagella, organised such that both originate from the same invagination (or gullet). One flagellum points forwards, and is covered in hair-like mastigonemes, while the other points backwards across the cell surface, lying within a ventral groove. Raphidophytes contain numerous ellipsoid chloroplasts, which contain chlorophylls a, c1 and c2. They also make use of accessory pigments including β-carotene and diadinoxanthin. Unlike other heterokontophytes, raphidophytes do not possess the photoreceptive organelle (or eyespot) typical of this group. In terms of ecology, raphidophytes occur as photosynthetic autotrophs across a range of ...
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Raphidophyte
The raphidophytes, formally known as Raphidomonadea or Raphidophyceae (formerly referred to as Chloromonadophyceae and Chloromonadineae), are a small group of eukaryotic algae that includes both marine and freshwater species. All raphidophytes are unicellular, with large cells (50 to 100 μm), but no cell walls. Raphidophytes possess a pair of flagella, organised such that both originate from the same invagination (or gullet). One flagellum points forwards, and is covered in hair-like mastigonemes, while the other points backwards across the cell surface, lying within a ventral groove. Raphidophytes contain numerous ellipsoid chloroplasts, which contain chlorophylls a, c1 and c2. They also make use of accessory pigments including β-carotene and diadinoxanthin. Unlike other heterokontophytes, raphidophytes do not possess the photoreceptive organelle (or eyespot) typical of this group. In terms of ecology, raphidophytes occur as photosynthetic autotrophs across a range of ...
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Chattonellales
Chattonellales is an order of algae belonging to the class Raphidophyceae The raphidophytes, formally known as Raphidomonadea or Raphidophyceae (formerly referred to as Chloromonadophyceae and Chloromonadineae), are a small group of eukaryotic algae that includes both marine and freshwater species. All raphidophytes .... Families: * Chattonellaceae J.Throndsen * Fibrocapsaceae Cavalier-Smith * Haramonadaceae Cavalier-Smith * Stroemiaceae * Vacuolariaceae A.Luther, Luther References {{Taxonbar, from=Q21400364 Ochrophyta Heterokont orders ...
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Brevetoxin
Brevetoxin (PbTx), or brevetoxins, are a suite of cyclic polyether compounds produced naturally by a species of dinoflagellate known as '' Karenia brevis''. Brevetoxins are neurotoxins that bind to voltage-gated sodium channels in nerve cells, leading to disruption of normal neurological processes and causing the illness clinically described as neurotoxic shellfish poisoning (NSP). Although brevetoxins are most well-studied in ''K. brevis'', they are also found in other species of '' Karenia'' and at least one large fish kill has been traced to brevetoxins in ''Chattonella''. Other Brevetoxins: *Brevetoxin-5 (PbTx-5): like PbTx-2, but acetylated hydroxyl group in position 38. *Brevetoxin-6 (PbTx-6): like PbTx-2, but double bond 27-28 is epoxidated. Brevetoxin-B was synthesized in 1995 by K. C. Nicolaou and coworkers in 123 steps with 91% average yield (final yield ~9·10−6) and in 2004 in a total of 90 steps with an average 93% yield for each step (0.14% overall). K. C. Nic ...
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Eukaryote
Eukaryotes () are organisms whose cells have a nucleus. All animals, plants, fungi, and many unicellular organisms, are Eukaryotes. They belong to the group of organisms Eukaryota or Eukarya, which is one of the three domains of life. Bacteria and Archaea (both prokaryotes) make up the other two domains. The eukaryotes are usually now regarded as having emerged in the Archaea or as a sister of the Asgard archaea. This implies that there are only two domains of life, Bacteria and Archaea, with eukaryotes incorporated among archaea. Eukaryotes represent a small minority of the number of organisms, but, due to their generally much larger size, their collective global biomass is estimated to be about equal to that of prokaryotes. Eukaryotes emerged approximately 2.3–1.8 billion years ago, during the Proterozoic eon, likely as flagellated phagotrophs. Their name comes from the Greek εὖ (''eu'', "well" or "good") and κάρυον (''karyon'', "nut" or "kernel"). Euka ...
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SAR Supergroup
The SAR supergroup, also just SAR or Harosa, is a clade that includes stramenopiles (heterokonts), alveolates, and Rhizaria. The name is an acronym derived from the first letters of each of these clades; it has been alternatively spelled "RAS". The term "Harosa" (at the subkingdom level) has also been used. The SAR supergroup is a node-based taxon. Note that as a formal taxon, "Sar" has only its first letter capitalized, while the earlier abbreviation, SAR, retains all uppercase letters. Both names refer to the same group of organisms, unless further taxonomic revisions deem otherwise. Members of the SAR supergroup were once included under the separate supergroups Chromalveolata (Chromista and Alveolata) and Rhizaria, until phylogenetic studies confirmed that stramenopiles and alveolates diverged with Rhizaria. This apparently excluded haptophytes and cryptomonads, leading Okamoto ''et al.'' (2009) to propose the clade Hacrobia to accommodate them. Phylogeny Based on a compi ...
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Heterokont
Heterokonts are a group of protists (formally referred to as Heterokonta, Heterokontae or Heterokontophyta). The group is a major line of eukaryotes. Most are algae, ranging from the giant multicellular kelp to the unicellular diatoms, which are a primary component of plankton. Other notable members of the Stramenopiles include the (generally) parasitic oomycetes, including ''Phytophthora'', which caused the Great Famine of Ireland, and ''Pythium'', which causes seed rot and damping off. The name "heterokont" refers to the type of motile life cycle stage, in which the flagellated cells possess two differently arranged flagella (see zoospore). History In 1899, Alexander Luther created the term "Heterokontae" for some algae with unequal flagella, today called Xanthophyceae. Later, some authors (e.g., Copeland, 1956) included other groups in Heterokonta, expanding the name's sense. The term continues to be applied in different ways, leading to Heterokontophyta being applie ...
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Ochrophyta
The ochrophytes, subphylum Ochrophytina, is a group of mostly photosynthetic heterokonts. Their plastid is of red algal origin. The classification of the group is still being worked out. Originally, the ochrophytes were regarded as a phylum denominated Ochrophyta. Some authors (e.g., Cavalier-Smith) divided it into two subphyla, Phaeista Cavalier-Smith 1995 (comprising Hypogyristea and Chrysista in some classifications, or Limnista and Marista in others) and Khakista Cavalier-Smith, 2000 (comprising '' Bolidomonas'' and diatoms). Others prefer not to use the subphyla, listing only lower taxa (e.g., Reviers, 2002, Guiry & Guiry, 2014). However, it is currently regarded as a subphylum inside of the phylum Gyrista, along with Pseudofungi and Bigyromonada. It contains two infraphyla: Diatomista, containing diatoms and related groups, and Chrysista, containing brown and golden algae and related groups. Phylogeny The cladogram below shows the evolutionary relationships between a ...
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Monoclonal Antibodies
A monoclonal antibody (mAb, more rarely called moAb) is an antibody produced from a cell Lineage made by cloning a unique white blood cell. All subsequent antibodies derived this way trace back to a unique parent cell. Monoclonal antibodies can have monovalent affinity, binding only to the same epitope (the part of an antigen that is recognized by the antibody). In contrast, polyclonal antibodies bind to multiple epitopes and are usually made by several different antibody-secreting plasma cell lineages. Bispecific monoclonal antibodies can also be engineered, by increasing the therapeutic targets of one monoclonal antibody to two epitopes. It is possible to produce monoclonal antibodies that specifically bind to virtually any suitable substance; they can then serve to detect or purify it. This capability has become an investigative tool in biochemistry, molecular biology, and medicine. Monoclonal antibodies are being used on a clinical level for both the diagnosis and therapy ...
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Random Amplification Of Polymorphic DNA
Random amplification of polymorphic DNA (RAPD), pronounced "rapid", is a type of polymerase chain reaction (PCR), but the segments of DNA that are amplified are random. The scientist performing RAPD creates several arbitrary, short primers (10- 12 nucleotides), then proceeds with the PCR using a large template of genomic DNA, hoping that fragments will amplify. By resolving the resulting patterns, a semi-unique profile can be gleaned from an RAPD reaction. No knowledge of the DNA sequence of the targeted genome is required, as the primers will bind somewhere in the sequence, but it is not certain exactly where. This makes the method popular for comparing the DNA of biological systems that have not had the attention of the scientific community, or in a system in which relatively few DNA sequences are compared (it is not suitable for forming a cDNA databank). Because it relies on a large, intact DNA template sequence, it has some limitations in the use of degraded DNA samples. ...
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Algal Bloom
An algal bloom or algae bloom is a rapid increase or accumulation in the population of algae in freshwater or marine water systems. It is often recognized by the discoloration in the water from the algae's pigments. The term ''algae'' encompasses many types of aquatic photosynthetic organisms, both macroscopic multicellular organisms like seaweed and microscopic unicellular organisms like cyanobacteria.  ''Algal bloom'' commonly refers to the rapid growth of microscopic unicellular algae, not macroscopic algae. An example of a macroscopic algal bloom is a kelp forest. Algal blooms are the result of a nutrient, like nitrogen or phosphorus from various sources (for example fertilizer runoff or other forms of nutrient pollution), entering the aquatic system and causing excessive growth of algae. An algal bloom affects the whole ecosystem. Consequences range from the benign feeding of higher trophic levels to more harmful effects like blocking sunlight from reaching other organ ...
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