Burkholderia Fungorum
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Burkholderia Fungorum
Paraburkholderia fungorum (P. fungorum) is a Gram-negative species of bacteria. that has been commonly used as a beneficial microorganism in agriculture as an agent for biocontrol and bioremediation. ''Paraburkholderia fungorum'' is Some of its strains can use uranium for their growth and convert U(VI) to U(IV). Methodology The pangolin P. fungorum (pangolin Pf) genome has a genomic size of approximately 7.7 Mbps with N50 of 69,666 bps. It has been shown that pangolin Pf is a Paraburkholderia fungorum evidence from the core genome SNP-based phylogenetic analysis and the ANI analysis supported via Functional analysis has shown that the presence of a considerably large number of genes related to stress response, virulence, disease, and defence. Different types of secretion systems have been identified in the genome of pangolin Pf, which are highly specialized and responsible for a bacterium’s response to its environment and in physiological processes such as survival, adhesion, ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Uranium
Uranium is a chemical element with the symbol U and atomic number 92. It is a silvery-grey metal in the actinide series of the periodic table. A uranium atom has 92 protons and 92 electrons, of which 6 are valence electrons. Uranium is weakly radioactive because all isotopes of uranium are unstable; the half-lives of its naturally occurring isotopes range between 159,200 years and 4.5 billion years. The most common isotopes in natural uranium are uranium-238 (which has 146 neutrons and accounts for over 99% of uranium on Earth) and uranium-235 (which has 143 neutrons). Uranium has the highest atomic weight of the primordially occurring elements. Its density is about 70% higher than that of lead, and slightly lower than that of gold or tungsten. It occurs naturally in low concentrations of a few parts per million in soil, rock and water, and is commercially extracted from uranium-bearing minerals such as uraninite. In nature, uranium is found as uranium-238 (99. ...
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Pangolin
Pangolins, sometimes known as scaly anteaters, are mammals of the order Pholidota (, from Ancient Greek ϕολιδωτός – "clad in scales"). The one extant family, the Manidae, has three genera: '' Manis'', '' Phataginus'', and '' Smutsia''. ''Manis'' comprises the four species found in Asia, while ''Phataginus'' and ''Smutsia'' include two species each, all found in sub-Saharan Africa. These species range in size from . A number of extinct pangolin species are also known. Pangolins have large, protective keratin scales, similar in material to fingernails and toenails, covering their skin; they are the only known mammals with this feature. They live in hollow trees or burrows, depending on the species. Pangolins are nocturnal, and their diet consists of mainly ants and termites, which they capture using their long tongues. They tend to be solitary animals, meeting only to mate and produce a litter of one to three offspring, which they raise for about two years. Pangol ...
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Shewanella Putrefaciens
''Shewanella putrefaciens'' is a Gram-negative pleomorphic bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison Formation in New Mexico. ''S. putrefaciens'' is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamine (hence the species name putrefaciens, from putrid). In both solid and liquid media, ''S. putrefaciens'' is often recognizable by its bright pink color. On solid media, the colonies are round, fast-growing, and pink. The organism is also fast-growing in liquid media, and there will give the liquid an overall pink hue. On blood agar plates, the colonies are typically convex ...
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Geobacter Metallireducens
''Geobacter metallireducens'' is a gram-negative metal-reducing proteobacterium. It is a strict anaerobe that oxidizes several short-chain fatty acids, alcohols, and monoaromatic compounds with Fe(III) as the sole electron acceptor. It can also use uranium for its growth and convert U(VI) to U(IV). ''Geobacter metallireducens'' was discovered by Derek Lovley at UMass Amherst in 1993. It is an iron-reducing bacteria and it has been thought that the microbe could be used to treat industrial sites where "cyanide-metal complexes" have formed to contaminate the site. ''Geobacter metallireducens'' becomes motile when necessary, producing a flagellum in order to relocate when environmental conditions become unfavorable. The genome of ''Geobacter metallireducens'' has a chromosome length of 3,997,420 bp. It has a circular bacterial chromosome, meaning there are no free ends of DNA. The shape is roughly like that of an egg. ''Geobacter metallireducens'' also has a GC content of 59.51 ...
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Paraburkholderia
''Paraburkholderia'' is a genus of Pseudomonadota that are gram negative, slightly curved rods that are motile by means of flagella. They have been reported to colonize endophytic tissues of hybrid spruce (Picea glauca x engelmannii) and lodgepole pine with a strong potential to perform biological nitrogen fixation and plant growth promotion. Unlike ''Burkholderia'' species, ''Paraburkholderia'' members are not commonly associated with human infection. ''Paraburkholderia'' members form a monophyletic clade within the Burkholderiaceae family, which is what prompted their distinction as a genus independent from ''Burkholderia'' species, in combination with the finding of robust conserved signature indels which are unique to ''Paraburkholderia'' species, and are lacking in members of the genus ''Burkholderia''. These CSIs distinguish the genus from all other bacteria. Additionally, the CSIs that were found to be shared by ''Burkholderia'' species are absent in ''Paraburkholderia'' ...
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