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Alicyclobacillaceae
The Alicyclobacillaceae are a family of Gram-positive bacteria. All members of this family are aerobic and form endospores. The family contains four genera: ''Alicyclobacillus'', ''Effusibacillus'', '' Kyrpidia'', and '' Tumebacillus''. When originally created in 2009, Alicyclobacillaceae was a monophyletic family, only including genus ''Alicyclobacillus''. In 2011, the novel genus '' Kyrpidia'' was proposed and placed in family Alicyclobacillaceae, and '' Tumebacillus'' was placed into the family as well. In 2014, the novel genus ''Effusibacillus'' was proposed and added as the fourth member of Alicyclobacillaceae. ''Alicyclobacillus'' is the largest genus in Alicyclobacillaceae, with over 20 validly published species. The species are all acidophilic and have thermally resistant endospores. Many species are common soil organisms. Certain ''Alicyclobacillus'' species (especially '' A. acidoterrestris'') have been implicated in spoilage of pasteurized fruit juice. ''Effusibacill ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Effusibacillus
''Effusibacillus'' is a genus of Gram-positive, rod-shaped, aerobic, spore-forming bacteria. ''Effusibacillus'' was first proposed in 2014 after a strain of bacteria was isolated from the sediment of a freshwater lake. While genetically similar to other members of the family ''Alicyclobacillaceae'', the strain was found to be distinct enough to require its own genus, and was named ''E. lacus.'' It was also found that two other previously described organisms in the genus ''Alicyclobacillus'', ''A. consociatus'' and ''A. pohliae'' belonged in this new genus. The name is derived from Latin ''effusus'' (disorderly) and ''bacillus'' (small rod), which refers to the various lengths of the cells microscopically. Members of this genus have been isolated from a lake in Japan, a lake in Antarctica, and from the blood of a woman (in a non-infectious capacity). ''E. lacus'' and ''E. pohliae'' are both thermophiles, with optimum growth temperatures above 50 °C, while the optimum growth ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Kyrpidia
''Kyrpidia'' is a genus of Gram-positive, rod-shaped, thermophilic, spore-forming bacteria. ''Bacillus tusciae'' was first described in 1984, and had been isolated from a geothermal area in Tuscany, Italy. It was placed within the genus ''Bacillus'' at that time. Further work on the organism led to the creation of a new genus, ''Kyrpidia'', in 2010. The genus was "named in honor of Nikolaos C. Kyrpides, a Greek-American genomics scientist, who co-initiated the Genomic Encyclopedia of ''Archaea'' and ''Bacteria''." ''K. tusciae'' is the type species for the genus. Both species of ''Kyrpidia'' have been isolated from areas of high volcanic activity in Tuscany and the Azores. The optimum temperature for growth for both members of the genus is approximately 55 °C. See also * List of bacterial orders * List of bacteria genera This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature ( ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bacillales
The Bacillales are an order of Gram-positive bacteria, placed within the Bacillota. Representative genera include ''Bacillus'', ''Listeria'' and ''Staphylococcus''. See also * List of bacteria genera * List of bacterial orders This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) and the phylogeny is based on 16S ... References Gram-positive bacteria Bacilli {{bacilli-stub ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Tumebacillus
''Tumebacillus'' is a genus of Gram-positive, rod-shaped, spore-forming bacteria. Members of the genus can be motile or non-motile, and form white or yellow colonies on R2A agar. The genus was first proposed in 2008 from the discovery of a potentially 5000-7000 year-old bacterium from Canadian high arctic permafrost, which would become the type strain of the genus '' T. permanentifrigoris''. The genus name was derived from Latin ''tume'' (from ''tumefacere'', to make swollen) and ''bacillus'' (small rod), referring to the swollen sporangia produced by ''T. permanentifrigoris'' and the shape of the cells. Members of this genus have been isolated from arctic permafrost, soil samples, cassava wastewater, decomposing algal scum, river water, and the gut of a vulture. ''Tumebacillus'' was found during surveys of nasal airways of infants, an underground subway in Norway, and a mountain observatory in Austria. Phylogeny The currently accepted taxonomy is based on the List of Prokaryo ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Bacteria Genera
This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However many taxonomic names are taken from the GTDB release 07-RS207 (8th April 2022). Phyla {, border="0" style="width: 100%;" ! , - , style="border:0px" valign="top", {, class="wikitable sortable" style="width: 100%; font-size: 95%;" !Syperphylum !Phylum !Authority !Synonyms , - , Parakaryota , , , Myojin parakaryote , - , , " Canglongiota" , Zhang et al. 2022 , , - , , " Fervidibacteria" , , OctSpa1-106 , - , , " Heilongiota" , Zhang et al. 2022 , , - , , " Qinglongiota" , Zhang et al. 2022 , , - , , " Salinosulfoleibacteria" , Tazi et al. 2006 , , - , , " Teskebacteria" , Dojka 1998 , WS1 , - , , " Tharpellota" , Speth et al. 2022 , , - , Terrabacteria , Chloroflexota , Whitman et al. 2018 , "Thermomicrobiota" , - , Terrabacteria , " Dormibacterota ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Effusibacillus Consociatus
''Effusibacillus consociatus'' is a species of Gram positive, aerobic, bacterium. The cells are rod-shaped and form spores. It was first isolated from a blood sample from a 51-year-old woman, although it was not implicated as a pathogen. The species name is derived from Latin ''consociatus'' (associated with), to indicate that the bacteria was associated with a human clinical case. The species was originally grouped with genus ''Alicyclobacillus ''Alicyclobacillus'' is a genus of Gram-variable, rod-shaped, spore-forming bacteria. The bacteria are able to grow in acidic conditions, while the spores are able to survive typical pasteurization procedures. Overview ''Alicyclobacilli'' are s ...'', as it was closely related to '' A. pohliae''. However, further research found that both ''A. consociatus'' and ''A. pohliae'' belonged in a newly described genus ''Effusibacillus'', and were renamed accordingly. The optimum growth temperature for ''E. consociatus'' is 30 °C, and ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Austria
Austria, , bar, Östareich officially the Republic of Austria, is a country in the southern part of Central Europe, lying in the Eastern Alps. It is a federation of nine states, one of which is the capital, Vienna, the most populous city and state. A landlocked country, Austria is bordered by Germany to the northwest, the Czech Republic to the north, Slovakia to the northeast, Hungary to the east, Slovenia and Italy to the south, and Switzerland and Liechtenstein to the west. The country occupies an area of and has a population of 9 million. Austria emerged from the remnants of the Eastern and Hungarian March at the end of the first millennium. Originally a margraviate of Bavaria, it developed into a duchy of the Holy Roman Empire in 1156 and was later made an archduchy in 1453. In the 16th century, Vienna began serving as the empire's administrative capital and Austria thus became the heartland of the Habsburg monarchy. After the dissolution of the H ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Bacterial Orders
This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) and the phylogeny is based on 16S rRNA-based LTP release 132 by The All-Species Living Tree Project. Phylogeny National Center for Biotechnology Information (NCBI) taxonomy was initially used to decorate the genome tree via tax2tree. The 16S rRNA-based Greengenes taxonomy is used to supplement the taxonomy particularly in regions of the tree with no cultured representatives. List of Prokaryotic names with Standing in Nomenclature (LPSN) is used as the primary taxonomic authority for establishing naming priorities. Taxonomic ranks are normalised using phylorank and the taxonomy manually curated to remove polyphyletic groups. Cladogram was taken from GTDB release 07-RS207 (8th April 2022). Clade Terrabacteria Phylum Chloroflexota * Class ?"Bathosphaeria" Mehrshad ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Genome Taxonomy Database
The Genome Taxonomy Database (GTDB) is an online database that maintains information on a proposed nomenclature of prokaryotes, following a phylogenomic approach based on a set of conserved single-copy proteins. In addition to breaking up paraphyletic groups, this method also reassigns taxonomic ranks algorithmically, creating new names in both cases. Information for archaea was added in 2020, along with a species classification based on average nucleotide identity. Each update incorporates new genomes as well as human adjustments to the taxonomy. An open-source tool called GTDB-Tk is available to classify draft genomes into the GTDB hierarchy. The GTDB system, via GTDB-Tk, has been used to catalogue not-yet-named bacteria in the human gut microbiome and other metagenomic sources. The GTDB is incorporated into the ''Bergey's Manual of Systematics of Archaea and Bacteria'' in 2019 as its phylogenomic resource. See also * PhyloCode * National Center for Biotechnology Informa ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
The All-Species Living Tree Project
The All-Species Living Tree' Project is a collaboration between various academic groups/institutes, such as ARB Project, ARB, SILVA rRNA database project, and List of Prokaryotic names with Standing in Nomenclature, LPSN, with the aim of assembling a database of 16S ribosomal RNA, 16S rRNA sequences of all validly published species of ''Bacteria'' and ''Archaea''. At one stage, 23S ribosomal RNA, 23S sequences were also collected, but this has since stopped. Currently there are over 10,950 species in the aligned dataset and several more are being added either as new species are discovered or species that are not represented in the database are sequenced. Initially the latter group consisted of 7% of species. Similar (and more recent) projects include the Genomic Encyclopedia of Bacteria and Archaea (GEBA), which focused on whole genome sequencing of bacteria and archaea. Tree The tree was created by maximum likelihood analysis without bootstrap: consequently accuracy is traded ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
National Center For Biotechnology Information
The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The NCBI is located in Bethesda, Maryland, and was founded in 1988 through legislation sponsored by US Congressman Claude Pepper. The NCBI houses a series of databases relevant to biotechnology and biomedicine and is an important resource for bioinformatics tools and services. Major databases include GenBank for DNA sequences and PubMed, a bibliographic database for biomedical literature. Other databases include the NCBI Epigenomics database. All these databases are available online through the Entrez search engine. NCBI was directed by David Lipman, one of the original authors of the BLAST sequence alignment program and a widely respected figure in bioinformatics. GenBank NCBI had responsibility for making available the GenBank DNA seque ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Prokaryotic Names With Standing In Nomenclature
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes The International Code of Nomenclature of Prokaryotes (ICNP) formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC) governs the scientific names for Bacteria and Archaea.P. H. A. Sneath, 2003. A short hist .... The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service. References External links List of Prokaryotic names with Standing in Nomenclature [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |