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Ammonifex Degensii
''Ammonifex degensii'' is a Gram-negative bacterium from the genus of Ammonifex which has been isolated from a volcanic hot spring from the Kawah Candradimuka crater, Dieng Plateau, Java, Indonesia Indonesia, officially the Republic of Indonesia, is a country in Southeast Asia and Oceania between the Indian and Pacific oceans. It consists of over 17,000 islands, including Sumatra, Java, Sulawesi, and parts of Borneo and New Guine .... References Thermoanaerobacterales Bacteria described in 1996 Thermophiles Anaerobes {{Firmicutes-stub ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Bacillota
The Bacillota (synonym Firmicutes) are a phylum of bacteria, most of which have gram-positive cell wall structure. The renaming of phyla such as Firmicutes in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The name "Firmicutes" was derived from the Latin words for "tough skin," referring to the thick cell wall typical of bacteria in this phylum. Scientists once classified the Firmicutes to include all gram-positive bacteria, but have recently defined them to be of a core group of related forms called the low- G+C group, in contrast to the Actinomycetota. They have round cells, called cocci (singular coccus), or rod-like forms (bacillus). A few Firmicutes, such as ''Megasphaera'', ''Pectinatus'', ''Selenomonas'' and ''Zymophilus'', have a porous pseudo-outer membrane that causes them to stain gram-negative. Many Bacillota (Firmicutes) produce endospores, which are resistant to desiccation and can ...
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Thermoanaerobacterales
The Thermoanaerobacterales is a polyphyletic order of bacteria placed within the polyphyletic class Clostridia, and encompassing four families: the Thermoanaerobacteraceae, the Thermodesulfobiaceae, the Thermoanaerobacterales Family III. Incertae Sedis, and the Thermoanaerobacterales Family IV. Incertae Sedis, and various unplaced genera. This order is noted for the species' abilities to survive in extreme environments without oxygen and of relatively elevated temperatures for a living being (up to 80-90 °C). An example organism in this order is '' Thermoanaerobacter ethanolicus''.C.Michael Hogan. 2010''Extremophile''. eds. E.Monosson & C.Cleveland, Encyclopedia of Earth. National Council for Science and the Environment, Washington DC./ref> Phylogeny The Thermoanaerobacterales, as previously mentioned, is polyphyletic A polyphyletic group is an assemblage of organisms or other evolving elements that is of mixed evolutionary origin. The term is often applied to grou ...
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Thermoanaerobacteraceae
The Thermoanaerobacteraceae is a highly polyphyletic family of bacteria placed within the class clostridia. Originally placed within the highly polyphyletic class Clostridia and order Thermoanaerobacterales, according to the NCBI and LPSN, it is now thought to be a basal clade of the phylum Bacillota. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) and the phylogeny is based on 16S rRNA-based LTP release 111 by The All-Species Living Tree ProjectAll-Species Living Tree Project The All-Species Living Tree' Project is a collaboration between various academic groups/institutes, such as ARB, SILVA rRNA database project, and LPSN, with the aim of assembling a database of 16S rRNA sequences of all validly published species .... References {{Taxonbar, from=Q3990307 *Thermoanaerobacterales ...
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Ammonifex
''Ammonifex'' is a Gram-negative, extremely thermophilic, strictly anaerobic and motile genus of bacteria from the family of Thermoanaerobacteraceae The Thermoanaerobacteraceae is a highly polyphyletic family of bacteria placed within the class clostridia. Originally placed within the highly polyphyletic class Clostridia and order Thermoanaerobacterales, according to the NCBI and LPSN, it is .... References Further reading * Thermoanaerobacterales Bacteria genera Thermophiles Anaerobes {{Firmicutes-stub ...
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LPSN
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes The International Code of Nomenclature of Prokaryotes (ICNP) formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC) governs the scientific names for Bacteria and Archaea.P. H. A. Sneath, 2003. A short hist .... The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service. References External links List of Prokaryotic names with Standing in Nomenclature
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Hot Spring
A hot spring, hydrothermal spring, or geothermal spring is a spring produced by the emergence of geothermally heated groundwater onto the surface of the Earth. The groundwater is heated either by shallow bodies of magma (molten rock) or by circulation through faults to hot rock deep in the Earth's crust. In either case, the ultimate source of the heat is radioactive decay of naturally occurring radioactive elements in the Earth's mantle, the layer beneath the crust. Hot spring water often contains large amounts of dissolved minerals. The chemistry of hot springs ranges from acid sulfate springs with a pH as low as 0.8, to alkaline chloride springs saturated with silica, to bicarbonate springs saturated with carbon dioxide and carbonate minerals. Some springs also contain abundant dissolved iron. The minerals brought to the surface in hot springs often feed communities of extremophiles, microorganisms adapted to extreme conditions, and it is possible that life on Earth had its ...
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Volcanic Crater
A volcanic crater is an approximately circular depression in the ground caused by Volcano, volcanic activity. It is typically a bowl-shaped feature containing one or more vents. During Types of volcanic eruptions, volcanic eruptions, molten magma and volcanic gases rise from an underground magma chamber, through a conduit, until they reach the crater's vent, from where the gases escape into the atmosphere and the magma is erupted as lava. A volcanic crater can be of large dimensions, and sometimes of great depth. During certain types of explosive eruptions, a volcano's magma chamber may empty enough for an area above it to subside, forming a type of larger depression known as a caldera. Geomorphology In most volcanoes, the crater is situated at the top of a mountain formed from the erupted volcanic deposits such as lava flows and tephra. Volcanoes that terminate in such a summit crater are usually of a conical form. Other volcanic craters may be found on the flanks of volcanoe ...
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Dieng Plateau
The Dieng Plateau is a marshy plateau that forms the floor of a caldera complex on the Dieng Volcanic Complex in Wonosobo and Banjarnegara Regencies, Central Java Province, Indonesia. Referred to as "Dieng" by Indonesians, it sits at above sea level, far from major population centres. The name "Dieng" comes from ''Dihyang'' which means "place of the ancestors or gods". Part of General Sudirman's guerrilla campaign during the Indonesian War of Independence took place in the area. Etymology The name "Dihyang" comes from Old Javanese: ''di'' means "place" and ''hyang'' means "ancestor" or "gods", literally Dihyang means "place of the ancestors". Dihyang is a mountainous area, ancient Javanese believed that ancestors and gods resided in high places. An inscription reveals that the ancient Javanese used the Dihyang area as a center for worship. Mentioned in the Gunung Wule inscription in 861 AD, someone was ordered to maintain a sacred building in an area called ''Dihyang''. Local ...
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Java
Java (; id, Jawa, ; jv, ꦗꦮ; su, ) is one of the Greater Sunda Islands in Indonesia. It is bordered by the Indian Ocean to the south and the Java Sea to the north. With a population of 151.6 million people, Java is the world's List of islands by population, most populous island, home to approximately 56% of the Demographics of Indonesia, Indonesian population. Indonesia's capital city, Jakarta, is on Java's northwestern coast. Many of the best known events in Indonesian history took place on Java. It was the centre of powerful Hindu-Buddhist empires, the Islamic sultanates, and the core of the colonial Dutch East Indies. Java was also the center of the History of Indonesia, Indonesian struggle for independence during the 1930s and 1940s. Java dominates Indonesia politically, economically and culturally. Four of Indonesia's eight UNESCO world heritage sites are located in Java: Ujung Kulon National Park, Borobudur Temple, Prambanan Temple, and Sangiran Early Man Site. ...
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Indonesia
Indonesia, officially the Republic of Indonesia, is a country in Southeast Asia and Oceania between the Indian and Pacific oceans. It consists of over 17,000 islands, including Sumatra, Java, Sulawesi, and parts of Borneo and New Guinea. Indonesia is the world's largest archipelagic state and the 14th-largest country by area, at . With over 275 million people, Indonesia is the world's fourth-most populous country and the most populous Muslim-majority country. Java, the world's most populous island, is home to more than half of the country's population. Indonesia is a presidential republic with an elected legislature. It has 38 provinces, of which nine have special status. The country's capital, Jakarta, is the world's second-most populous urban area. Indonesia shares land borders with Papua New Guinea, East Timor, and the eastern part of Malaysia, as well as maritime borders with Singapore, Vietnam, Thailand, the Philippines, Australia, Palau, and India ...
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