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-monas
The suffix -monas is used in microbiology for many genera and is intended to mean "unicellular organism". Meaning The suffix -monas found in many genera in microbiology is similar in usage to -bacter, -bacillus, -coccus or -spirillum. The genera with the suffix are not a monophyletic group and the suffix is chosen over -bacter, often simply out of stylistic preferences to match with Greek words. The first genus to be given the suffix -monas was ''Pseudomonas'', a genus of gammaproteobacteria. The generic epithet ''Pseudomonas'' was coined by Walter Migula in 1894, who did not give an etymology.Migula, W. (1900) System der Bakterien, Vol. 2. Jena, Germany: Gustav Fischer. Since the 7th edition of Bergey's manual (=top authority in bacterial nomenclature), other authors have given the etymology to be: Greek (, false) and (, single unit or monad), which can mean "false unit". However, "false unit" conceptually does not make much sense, namely, it does not mean "an organism which ...
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-bacter
The suffix -bacter is in microbiology for many genera and is intended to mean "bacteria". Meaning Bacter is a new Latin (i.e. Modern Latin) term coined from bacterium, which in turn derives from the Greek βακτήριον, meaning small staff (diminutive of βακτηρία). Consequently, it formally means "rod". It differs from the suffix ''-bacterium'' in grammatical gender, the former being male and the latter being neuter; this was decided in Juridical (or Judicial) Opinion n° 3 of the Bacteriological Code. Nevertheless, for historical reasons, two archaeal species finish in -bacter: ''Methanobrevibacter'' and ''Methanothermobacter''. Usage Juridical Opinion n° 2 in the Bacteriological Code discusses the declension of the word, given that authors differently assumed the genitive case of bacter to be ''bactris'' (3rd declension words of Latin origin ending in =ter), ''bacteri'' (2nd declension) or ''bacteris'' (3rd declension, used for words of Greek origin, such as ast ...
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Aeromonas
''Aeromonas'' is a genus of Gram-negative, facultative anaerobic, rod-shaped bacteria that morphologically resemble members of the family Enterobacteriaceae. Most of the 14 described species have been associated with human diseases. The most important pathogens are '' A. hydrophila'', '' A. caviae'', and '' A. veronii'' biovar ''sobria''. The organisms are ubiquitous in fresh and brackish water. They group with the gamma subclass of the Proteobacteria. Two major diseases associated with ''Aeromonas'' are gastroenteritis and wound infections, with or without bacteremia. Gastroenteritis typically occurs after the ingestion of contaminated water or food, whereas wound infections result from exposure to contaminated water. In its most severe form, ''Aeromonas'' spp. can cause necrotizing fasciitis, which is life-threatening, usually requiring treatment with antibiotics and even amputation. Although some potential virulence factors (e.g. endotoxins, hemolysins, enterotoxins, adherenc ...
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Pseudomonas
''Pseudomonas'' is a genus of Gram-negative, Gammaproteobacteria, belonging to the family Pseudomonadaceae and containing 191 described species. The members of the genus demonstrate a great deal of metabolic diversity and consequently are able to colonize a wide range of niches. Their ease of culture ''in vitro'' and availability of an increasing number of ''Pseudomonas'' strain genome sequences has made the genus an excellent focus for scientific research; the best studied species include '' P. aeruginosa'' in its role as an opportunistic human pathogen, the plant pathogen '' P. syringae'', the soil bacterium '' P. putida'', and the plant growth-promoting ''P. fluorescens, P. lini, P. migulae'', and ''P. graminis''. Because of their widespread occurrence in water and plant seeds such as dicots, the pseudomonads were observed early in the history of microbiology. The generic name ''Pseudomonas'' created for these organisms was defined in rather vague terms by Walter Migula ...
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Acidomonas
''Acidomonas'' is a genus in the phylum Pseudomonadota (Bacteria). The genus contains single species, namely '' A. methanolica'', formerly known as ''Acetobacter methanolicus'' Etymology The name ''Acidomonas'' derives from:Latin adjective ''acidus'', sour, acid; Latin feminine gender noun '' monas (μονάς)'', nominally meaning "a unit", but in effect meaning a bacterium; New Latin feminine gender noun ''acidomonas'', acidophilic monad. The specific epithet ''methanolica'' derives from New Latin neuter gender noun ''methanol'', methanol; Latin suff. -''icus'' -''a'' -''um'', suffix used in adjectives with the sense of belonging to; New Latin feminine gender adjective ''methanolica'', relating to methanol. Members of the genus ''Acidomonas'' can be referred to as acidomonad (''viz.'' Trivialisation of names). See also * Bacterial taxonomy Bacterial taxonomy is the taxonomy, i.e. the rank-based classification, of bacteria. In the scientific classification established ...
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Natronomonas
''Natronomonas'' (common abbreviation ''Nmn.''). is a genus of the Halobacteriaceae.See the NCBIbr>webpage on Natronomonas Data extracted from the Description and significance ''Natronomonas pharaonis'' is an aerobic, extremely haloalkaliphilic archaeon that grows optimally in 3.5M sodium chloride and at pH 8.5, but is sensitive to high magnesium concentrations. Genome structure The genome of ''Natronomonas pharaonis'' consists of three circular replicons, the chromosome which is 2,595,221 bp in length, a typical haloarchaeal 131-kb plasmid, and a unique multicopy 23-kb plasmid. Its chromosome has a high G + C content (63.4%). Also, a high proportion of acidic amino acids (average 19.3%) is found in the proteins of ''N. pharaonis'' which results in low isoelectric points (average pI 4.6). This is considered to be one of the adaptive features of haloarchaea, which are known to apply the salt-in strategy (high internal salt concentrations) in order to survive in their hype ...
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Acetobacteraceae
Acetobacteraceae is a family of Gram-negative bacteria, belonging to the order Rhodospirillales, class Alphaproteobacteria. Two distinct clades are recognized. The acetic acid bacteria and a more heterogeneous group including acidophilic and phototrophic bacteria. The type genus is ''Acetobacter''. Ten genera from ''Acetobacteraceae'' make up the acetic acid bacteria. History ''Acetobacteraceae'' was originally proposed as a family for ''Acetobacter'' and '' Gluconobacter'' based on rRNA and DNA–DNA hybridization comparisons in 1980. Genera Accepted Genera The following genera have been effectively and validly published: * ''Acetobacter ''Acetobacter'' is a genus of acetic acid bacteria. Acetic acid bacteria are characterized by the ability to convert ethanol to acetic acid in the presence of oxygen. Of these, the genus ''Acetobacter'' is distinguished by the ability to oxidize ...'' Beijerinck 1898 (Approved Lists 1980) * '' Acidibrevibacterium'' Muhadesi ''et al''. 201 ...
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Rhodospirillales
The Rhodospirillales are an order of Pseudomonadota. Notable Families The '' Acetobacteraceae'' comprise the acetic acid bacteria, which are heterotrophic and produce acetic acid during their respiration.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. . The ''Rhodospirillaceae'' include mainly purple nonsulfur bacteria, which produce energy through photosynthesis. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the nomenclature, naming and Taxonomy (biology), taxonomy of prokaryotes, following the taxonomy requirements and rulings of the In ... (LPSN). The phylogeny is based on whole-genome a ...
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Alphaproteobacteria
Alphaproteobacteria is a class of bacteria in the phylum Pseudomonadota (formerly Proteobacteria). The Magnetococcales and Mariprofundales are considered basal or sister to the Alphaproteobacteria. The Alphaproteobacteria are highly diverse and possess few commonalities, but nevertheless share a common ancestor. Like all ''Proteobacteria'', its members are gram-negative and some of its intracellular parasitic members lack peptidoglycan and are consequently gram variable. Characteristics The Alphaproteobacteria are a diverse taxon and comprises several phototrophic genera, several genera metabolising C1-compounds (''e.g.'', ''Methylobacterium'' spp.), symbionts of plants (''e.g.'', ''Rhizobium'' spp.), endosymbionts of arthropods (''Wolbachia'') and intracellular pathogens (''e.g. Rickettsia''). Moreover, the class is sister to the protomitochondrion, the bacterium that was engulfed by the eukaryotic ancestor and gave rise to the mitochondria, which are organelles in eukaryotic ...
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Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as '' Escherichia'', '' Salmonella'', '' Vibrio'', '' Yersinia'', '' Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (non parasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the I ...
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Thermoplasmatales
In taxonomy, the Thermoplasmatales are an order of the Thermoplasmata. All are acidophiles, growing optimally at pH below 2. ''Picrophilus'' is currently the most acidophilic of all known organisms, being capable of growing at a pH of -0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of ''Picrophilus''. Most members of the Thermotoplasmata are thermophilic. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). See also * List of Archaea genera This article lists the genera of the Archaea. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). Phylogeny National Center for ... References * Further reading Scientific journals * * * * Scientific books * * Scientific databases E ...
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Thermoplasmata
In taxonomy, the Thermoplasmata are a class of the Euryarchaeota. All are acidophiles, growing optimally at pH below 2. ''Picrophilus'' is currently the most acidophilic of all known organisms growing at a minimum pH of 0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of ''Picrophilus''. Most members of Thermotoplasmata are thermophilic. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). See also * List of Archaea genera This article lists the genera of the Archaea. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). Phylogeny National Center for ... References Further reading Scientific journals * * * * Scientific books * * Scientific databases External links Archae ...
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Thermogymnomonas
In taxonomy, the Thermoplasmatales are an order of the Thermoplasmata. All are acidophiles, growing optimally at pH below 2. '' Picrophilus'' is currently the most acidophilic of all known organisms, being capable of growing at a pH of -0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of '' Picrophilus''. Most members of the Thermotoplasmata are thermophilic. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The ... (NCBI). See also * List of Archaea genera References * Further reading Scientific journals * * * * Scientific books * * Scientific databases ...
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