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-bacter
The suffix -bacter is in microbiology for many genera and is intended to mean "bacteria". Meaning Bacter is a new Latin (i.e. Modern Latin) term coined from bacterium, which in turn derives from the Greek βακτήριον, meaning small staff (diminutive of βακτηρία). Consequently, it formally means "rod". It differs from the suffix ''-bacterium'' in grammatical gender, the former being male and the latter being neuter; this was decided in Juridical (or Judicial) Opinion n° 3 of the Bacteriological Code. Nevertheless, for historical reasons, two archaeal species finish in -bacter: ''Methanobrevibacter'' and ''Methanothermobacter''. Usage Juridical Opinion n° 2 in the Bacteriological Code discusses the declension of the word, given that authors differently assumed the genitive case of bacter to be ''bactris'' (3rd declension words of Latin origin ending in =ter), ''bacteri'' (2nd declension) or ''bacteris'' (3rd declension, used for words of Greek origin, such as ast ...
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Bacterium
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationshi ...
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Campylobacter
''Campylobacter'' (meaning "curved bacteria") is a genus of Gram-negative bacteria. ''Campylobacter'' typically appear comma- or s-shaped, and are motile. Some ''Campylobacter'' species can infect humans, sometimes causing campylobacteriosis, a diarrhoeal disease in humans. Campylobacteriosis is usually self-limiting and antimicrobial treatment is often not required, except in severe cases or immunocompromised patients. The most known source for ''Campylobacter'' is poultry, but due to their diverse natural reservoir, ''Campylobacter'' spp. can also be transmitted ''via'' water. Other known sources of ''Campylobacter'' infections include food products, such as unpasteurised milk and contaminated fresh produce. Sometimes the source of infection can be direct contact with infected animals, which often carry ''Campylobacter'' asymptomatically. At least a dozen species of ''Campylobacter'' have been implicated in human disease, with ''C. jejuni'' (80–90%) and '' C. coli'' (5-10%) b ...
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Acanthopleuribacter
''Acanthopleuribacter pedis'' is a Gram-negative, rod-shaped bacterium found in marine environments. ''Acanthopleuribacter pedis'' is one of only two species of acidobacteria to have been isolated from animals. Colonies on marine agar are circular, smooth and yellow in color. ''Acanthopleuribacter pedis'' are found on marine agar at a temperature of 15–30 °C (optimally at 30 °C), and grows at a pH of 5–9 (optimally at pH 7–8). Etymology The etymology of the genus is: N.L. n. ''Acanthopleura ''Acanthopleura'' is a genus of chitons in the family Chitonidae Chitonidae is a family of chitons or polyplacophorans, marine mollusks whose shell is composed of eight articulating plates or valves. There are fifteen extant genera in three s ...'', a genus of shellfish; N.L. masc. n. '' bacter'', a rod; N.L. masc. n. ''Acanthopleuribacter'', a rod from ''Acanthopleura'', referring to the isolation of the first strain from the chiton ''Acanthopleura japonica''. T ...
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Acidaminobacter
''Acidaminobacter'' is a genus in the phylum Bacillota (Bacteria). Etymology The name ''Acidaminobacter'' derives from New Latin ''acidum aminum'', amino acid, a rod'' bacter'', nominally meaning "a rod", but in effect meaning a bacterium, a staff or rod; resulting in ''Acidaminobacter'', the amino acid rod bacterium. Species The genus contains a single species, ''Acidaminobacter hydrogenoformans'' (Stams and Hansen 1985, type species of the genus). The specific name is based on New Latin ''hydrogenum'' (from Greek ''húdōr'' (ὕδωρ), water; and ''gennaō'' (γεννάω), to produce) hydrogen (that which produces water, so called because it forms water when exposed to oxygen); Latin ''formans'', forming, giving hydrogen-forming.) See also * Bacterial taxonomy Bacterial taxonomy is the taxonomy, i.e. the rank-based classification, of bacteria. In the scientific classification established by Carl Linnaeus, each species has to be assigned to a genus ( binary nomenc ...
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Achromobacter
''Achromobacter'' is a genus of bacteria, included in the family Alcaligenaceae in the order Burkholderiales. The cells are Gram-negative straight rods and are motile by using one to 20 peritrichous flagella. They are strictly aerobic and are found in water (fresh and marine) and soils.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). ''Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria'', Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York: Springer. . They have also been identified as a contaminant in laboratory cell cultures. They have been identified as opportunistic human pathogens in people with certain immunosuppressive conditions such as cystic fibrosis Cystic fibrosis (CF) is a rare genetic disorder that affects mostly the lungs, but also the pancreas, liver, kidneys, and intestine. Long-term issues include difficulty breathing and coughing up mucus as a result of frequent lung infections. ...
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Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as ''Escherichia'', '' Salmonella'', ''Vibrio'', ''Yersinia'', ''Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (nonparasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the Internat ...
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Alphaproteobacteria
Alphaproteobacteria is a class of bacteria in the phylum Pseudomonadota (formerly Proteobacteria). The Magnetococcales and Mariprofundales are considered basal or sister to the Alphaproteobacteria. The Alphaproteobacteria are highly diverse and possess few commonalities, but nevertheless share a common ancestor. Like all ''Proteobacteria'', its members are gram-negative and some of its intracellular parasitic members lack peptidoglycan and are consequently gram variable. Characteristics The Alphaproteobacteria are a diverse taxon and comprises several phototrophic genera, several genera metabolising C1-compounds (''e.g.'', ''Methylobacterium'' spp.), symbionts of plants (''e.g.'', ''Rhizobium'' spp.), endosymbionts of arthropods (''Wolbachia'') and intracellular pathogens (''e.g. Rickettsia''). Moreover, the class is sister to the protomitochondrion, the bacterium that was engulfed by the eukaryotic ancestor and gave rise to the mitochondria, which are organelles in eukaryotic ce ...
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Rhodospirillales
The Rhodospirillales are an order of Pseudomonadota. Notable Families The ''Acetobacteraceae'' comprise the acetic acid bacteria, which are heterotrophic and produce acetic acid during their respiration.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. . The '' Rhodospirillaceae'' include mainly purple nonsulfur bacteria, which produce energy through photosynthesis. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature ... (LPSN). The phylogeny is based on whole-genome ...
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Acetobacteraceae
Acetobacteraceae is a family of Gram-negative bacteria, belonging to the order Rhodospirillales, class Alphaproteobacteria. Two distinct clades are recognized. The acetic acid bacteria and a more heterogeneous group including acidophilic and phototrophic bacteria. The type genus is ''Acetobacter''. Ten genera from ''Acetobacteraceae'' make up the acetic acid bacteria. History ''Acetobacteraceae'' was originally proposed as a family for ''Acetobacter'' and ''Gluconobacter'' based on rRNA and DNA–DNA hybridization comparisons in 1980. Genera Accepted Genera The following genera have been effectively and validly published: * ''Acetobacter'' Beijerinck 1898 (Approved Lists 1980) * '' Acidibrevibacterium'' Muhadesi ''et al''. 2019 * ''Acidicaldus'' Johnson ''et al''. 2006 * ''Acidiphilium'' Harrison 1981 * ''Acidisoma'' Belova ''et al''. 2009 * ''Acidisphaera'' Hiraishi ''et al''. 2000 * ''Acidocella'' Kishimoto ''et al''. 1996 * ''Acidomonas'' Urakami ''et al''. 1989 * '' Ameyamae ...
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Turicibacter Sp
''Turicibacter'' is a genus in the Bacillota phylum of bacteria that has most commonly been found in the guts of animals. The genus is named after the city in which it was first isolated, Zurich (Latin = Turicum), Switzerland. Phylogeny The position of ''Turicibacter'' within the Bacillota could not be resolved using 16S rRNA gene-based analyses. However, it was tentatively placed in the class Bacilli, then the class Erysipelotrichia. In a tree built using a concatenated protein alignment containing data from two draft ''Turicibacter'' genomes, the group was placed at the base of the class Bacilli Bacilli is a taxonomic class of bacteria that includes two orders, Bacillales and Lactobacillales, which contain several well-known pathogens such as ''Bacillus anthracis'' (the cause of anthrax). ''Bacilli'' are almost exclusively gram-positi .... Later analyses that also included amino acid sequences predicted by a complete ''Turicibacter'' genome came to the same conclusion. ...
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Betaproteobacteria
Betaproteobacteria are a class of Gram-negative bacteria, and one of the eight classes of the phylum Pseudomonadota (synonym Proteobacteria). The ''Betaproteobacteria'' are a class comprising over 75 genera and 400 species of bacteria. Together, the ''Betaproteobacteria'' represent a broad variety of metabolic strategies and occupy diverse environments from obligate pathogens living within host organisms to oligotrophic groundwater ecosystems. Whilst most members of the ''Betaproteobacteria'' are heterotrophic, deriving both their carbon and electrons from organocarbon sources, some are photoheterotrophic, deriving energy from light and carbon from organocarbon sources. Other genera are autotrophic, deriving their carbon from bicarbonate or carbon dioxide and their electrons from reduced inorganic ions such as nitrite, ammonium, thiosulfate or sulfide — many of these chemolithoautotrophic. ''Betaproteobacteria'' are economically important, with roles in maintaining soil p ...
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