|
Methanogen
Methanogens are anaerobic archaea that produce methane as a byproduct of their energy metabolism, i.e., catabolism. Methane production, or methanogenesis, is the only biochemical pathway for Adenosine triphosphate, ATP generation in methanogens. All known methanogens belong exclusively to the Domain (biology), domain Archaea, although some bacteria, plants, and animal cells are also known to produce methane. However, the biochemical pathway for methane production in these organisms differs from that in methanogens and does not contribute to ATP formation. Methanogens belong to various Phylum, phyla within the domain Archaea. Previous studies placed all known methanogens into the superphylum Euryarchaeota. However, recent phylogenomic data have led to their reclassification into several different phyla. Methanogens are common in various anoxic environments, such as marine and freshwater sediments, wetlands, the Gastrointestinal tract, digestive tracts of animals, wastewater treatment ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Methanogenesis
Methanogenesis or biomethanation is the formation of methane coupled to energy conservation by microbes known as methanogens. It is the fourth and final stage of anaerobic digestion. Organisms capable of producing methane for energy conservation have been identified only from the domain Archaea, a group phylogenetically distinct from both eukaryotes and bacteria, although many live in close association with anaerobic bacteria. The production of methane is an important and widespread form of microbial metabolism. In anoxic environments, it is the final step in the decomposition of biomass. Methanogenesis is responsible for significant amounts of natural gas accumulations, the remainder being thermogenic. Biochemistry Methanogenesis in microbes is a form of anaerobic respiration. Methanogens do not use oxygen to respire; in fact, oxygen inhibits the growth of methanogens. The terminal electron acceptor in methanogenesis is not oxygen, but carbon. The two best described pathways ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Archaea
Archaea ( ) is a Domain (biology), domain of organisms. Traditionally, Archaea only included its Prokaryote, prokaryotic members, but this has since been found to be paraphyletic, as eukaryotes are known to have evolved from archaea. Even though the domain Archaea Cladistics, cladistically includes eukaryotes, the term "archaea" (: archaeon , from the Greek "ἀρχαῖον", which means ancient) in English still generally refers specifically to prokaryotic members of Archaea. Archaea were initially Taxonomy (biology), classified as bacteria, receiving the name archaebacteria (, in the Archaebacteria Kingdom (biology), kingdom), but this term has fallen out of use. Archaeal cells have unique properties separating them from Bacteria and Eukaryote, Eukaryota. Archaea are further divided into multiple recognized phylum, phyla. Classification is difficult because most have not been Isolation (microbiology), isolated in a laboratory and have been detected only by their Gene, gene s ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Methane
Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The abundance of methane on Earth makes it an economically attractive fuel, although capturing and storing it is difficult because it is a gas at standard temperature and pressure. In the Earth's atmosphere methane is transparent to visible light but absorbs infrared radiation, acting as a greenhouse gas. Methane is an Organic chemistry, organic Organic compound, compound, and among the simplest of organic compounds. Methane is also a hydrocarbon. Naturally occurring methane is found both below ground and under the seafloor and is formed by both geological and biological processes. The largest reservoir of methane is under the seafloor in the form of methane clathrates. When methane reaches the surface and the Atmosphere of Earth, atmosphere, it is known as atmospheric methane. ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Methanosarcina Barkeri
''Methanosarcina barkeri'' is the type species of the genus ''Methanosarcina'', characterized by its wide range of substrates used in methanogenesis. While most known methanogens produce methane from H2 and CO2, ''M. barkeri'' can also dismutate methylated compounds such as methanol or methylamines, oxidize acetate, and reduce methylated compounds with H2. This makes ''M. barkeri'' one of the few ''Methanosarcina'' species capable of utilizing all four known methanogenesis pathways. Even among other ''Methanosarcinales'', which commonly utilize a broad range of substrates, the ability to grow on H2 and CO2 is rare due to the requirement for high H2 partial pressure. Like other ''Methanosarcina'' species, ''M. barkeri'' has a large genome (4.53 Mbp for the type strain MS, 4.9 Mbp for the Wiesmoor strain, and 4.5 Mbp for the CM2 strain), although it is significantly smaller than the largest archaeal genome of ''Methanosarcina acetivorans'' (5.75 Mbp for the type strain C2A). It is ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Anaerobic Organism
An anaerobic organism or anaerobe is any organism that does not require oxygen, molecular oxygen for growth. It may react negatively or even die if free oxygen is present. In contrast, an aerobic organism (aerobe) is an organism that requires an oxygenated environment. Anaerobes may be unicellular (e.g. protozoans, bacteria) or multicellular. Most fungi are obligate aerobes, requiring oxygen to survive. However, some species, such as the Chytridiomycota that reside in the rumen of cattle, are obligate anaerobes; for these species, anaerobic respiration is used because oxygen will disrupt their metabolism or kill them. The sea floor is possibly one of the largest accumulation of anaerobic organisms on Earth, where microbes are primarily concentrated around Hydrothermal_vent, hydrothermal vents. These microbes produce energy in absence of sunlight or oxygen through a process called chemosynthesis, whereby inorganic compounds such as hydrogen gas, hydrogen sulfide or ferrous ions are ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Methanobrevibacter Curvatus
''Methanobrevibacter curvatus'' is a species of methanogen archaeon. It was first isolated from the hindgut of the termite '' Reticulitermes flavipes''. It is rod-shaped, ranging in size from 0.34 to 1.6 μm and possesses polar fibers. Its morphology, gram-positive staining reaction, resistance to cell lysis by chemical agents and narrow range of utilisable substrates are typical of species belonging to the family Methanobacteriaceae. It habitates on or near the hindgut epithelium and also attached to filamentous prokaryotes A prokaryote (; less commonly spelled procaryote) is a single-celled organism whose cell lacks a nucleus and other membrane-bound organelles. The word ''prokaryote'' comes from the Ancient Greek (), meaning 'before', and (), meaning 'nut' ... associated with the gut wall. It is one of the predominant gut biota. References Further reading * * * * External linksLPSN*Type strain of ''Methanobrevibacter curvatus'' at Bac''Dive'' - th ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Methanobrevibacter Filiformis
''Methanobrevibacter filiformis'' is a species of methanogen archaeon. It was first isolated from the hindgut of the termite '' Reticulitermes flavipes''. It is rod-shaped and possesses polar fibers. Its morphology, gram-positive staining reaction, resistance to cell lysis by chemical agents and narrow range of utilisable substrates are typical of species belonging to the family Methanobacteriaceae. It habitates on or near the hindgut epithelium and also attached to filamentous prokaryotes A prokaryote (; less commonly spelled procaryote) is a single-celled organism whose cell lacks a nucleus and other membrane-bound organelles. The word ''prokaryote'' comes from the Ancient Greek (), meaning 'before', and (), meaning 'nut' ... associated with the gut wall. It is one of the predominant gut biota. References Further reading * * * * LPSN* External linksType strain of ''Methanobrevibacter filiformis'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Eu ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Enzyme
An enzyme () is a protein that acts as a biological catalyst by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different molecules known as product (chemistry), products. Almost all metabolism, metabolic processes in the cell (biology), cell need enzyme catalysis in order to occur at rates fast enough to sustain life. Metabolic pathways depend upon enzymes to catalyze individual steps. The study of enzymes is called ''enzymology'' and the field of pseudoenzyme, pseudoenzyme analysis recognizes that during evolution, some enzymes have lost the ability to carry out biological catalysis, which is often reflected in their amino acid sequences and unusual 'pseudocatalytic' properties. Enzymes are known to catalyze more than 5,000 biochemical reaction types. Other biocatalysts include Ribozyme, catalytic RNA molecules, also called ribozymes. They are sometimes descr ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Superoxide Dismutase
Superoxide dismutase (SOD, ) is an enzyme that alternately catalyzes the dismutation (or partitioning) of the superoxide () anion radical into normal molecular oxygen (O2) and hydrogen peroxide (). Superoxide is produced as a by-product of oxygen metabolism and, if not regulated, causes many types of cell damage. Hydrogen peroxide is also damaging and is degraded by other enzymes such as catalase. Thus, SOD is an important antioxidant defense in nearly all living cells exposed to oxygen. One exception is '' Lactobacillus plantarum'' and related lactobacilli, which use intracellular manganese to prevent damage from reactive . Chemical reaction SODs catalyze the disproportionation of superoxide: : + → + In this way, is converted into two less damaging species. The general form, applicable to all the different metal−coordinated forms of SOD, can be written as follows: * + → + * + + → + The reactions by which SOD−catalyzed dismutation of superoxide for ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Oxygen
Oxygen is a chemical element; it has chemical symbol, symbol O and atomic number 8. It is a member of the chalcogen group (periodic table), group in the periodic table, a highly reactivity (chemistry), reactive nonmetal (chemistry), nonmetal, and a potent oxidizing agent that readily forms oxides with most elements as well as with other chemical compound, compounds. Oxygen is abundance of elements in Earth's crust, the most abundant element in Earth's crust, making up almost half of the Earth's crust in the form of various oxides such as water, carbon dioxide, iron oxides and silicates.Atkins, P.; Jones, L.; Laverman, L. (2016).''Chemical Principles'', 7th edition. Freeman. It is abundance of chemical elements, the third-most abundant element in the universe after hydrogen and helium. At standard temperature and pressure, two oxygen atoms will chemical bond, bind covalent bond, covalently to form dioxygen, a colorless and odorless diatomic gas with the chemical formula ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Reactive Oxygen Species
In chemistry and biology, reactive oxygen species (ROS) are highly Reactivity (chemistry), reactive chemicals formed from diatomic oxygen (), water, and hydrogen peroxide. Some prominent ROS are hydroperoxide (H2O2), superoxide (O2−), hydroxyl radical (OH.), and singlet oxygen(1O2). ROS are pervasive because they are readily produced from O2, which is abundant. ROS are important in many ways, both beneficial and otherwise. ROS function as signals, that turn on and off biological functions. They are intermediates in the redox behavior of O2, which is central to fuel cells. ROS are central to the photodegradation of organic pollutants in the atmosphere. Most often however, ROS are discussed in a biological context, ranging from their effects on aging and their role in causing dangerous genetic mutations. Inventory of ROS ROS are not uniformly defined. All sources include superoxide, singlet oxygen, and hydroxyl radical. Hydrogen peroxide is not nearly as reactive as these s ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Euryarchaeota
Methanobacteriota is a phylum in the domain Archaea. Taxonomy The phylum ''Methanobacteriota'' was introduced to prokaryotic nomenclature in 2023. It contains following classes: *Archaeoglobi Garrity & Holt (2002) *Halobacteria Grant ''et al.'' (2002) *Methanobacteria Boone (2002) (contains type genus ''Methanobacterium'') *Methanococci Boone (2002) *Methanonatronarchaeia Sorokin ''et al.'' (2018) *Methanopyri Garrity & Holt (2002) *Methanosarcinia Chuvochina ''et al.'' (2024) *Thermococci Zillig & Reysenbach (2002) *Thermoplasmata Reysenbach (2002) References Archaea phyla {{Archaea-stub ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
