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Coronavirus 5′ UTR
Coronavirus genomes are Positive-sense single-stranded RNA virus, positive-sense single-stranded RNA molecules with an untranslated region (UTR) at the Directionality (molecular biology), 5′ end which is called the Five prime untranslated region, 5′ UTR. The 5′ UTR is responsible for important biological functions, such as viral Viral replication, replication, Transcription (biology), transcription and packaging. The 5′ UTR has a conserved RNA Nucleic acid secondary structure, secondary structure but different Coronavirus genera (alphacoronavirus, Alpha-, betacoronavirus, Beta-, gammacoronavirus, Gamma-, and Deltacoronavirus (genus), Deltacoronaviruses) have different structural features described below. Alphacoronavirus 5′ UTR The first 150 to 200 nucleotides within the 5′ UTR of Alphacoronaviruses are highly structured and shown to be Conserved sequence, conserved on the structural level. The 5′ UTRs are predicted to contain three conserved stem-loops: * SL1 is ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Coronavirus
Coronaviruses are a group of related RNA viruses that cause diseases in mammals and birds. In humans and birds, they cause respiratory tract infections that can range from mild to lethal. Mild illnesses in humans include some cases of the common cold (which is also caused by other viruses, predominantly rhinoviruses), while more lethal varieties can cause SARS, MERS and COVID-19. In cows and pigs they cause diarrhea, while in mice they cause hepatitis and encephalomyelitis. Coronaviruses constitute the subfamily ''Orthocoronavirinae'', in the family ''Coronaviridae'', order ''Nidovirales'' and realm ''Riboviria''. They are enveloped viruses with a Positive-strand RNA virus, positive-sense single-stranded RNA genome and a nucleocapsid of helical symmetry. The genome size of coronaviruses ranges from approximately 26 to 32 kilobases, one of the largest among RNA viruses. They have characteristic club-shaped Spike protein, spikes that project from their surface, which in electron ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Subgenomic MRNA
Subgenomic mRNAs are essentially smaller sections of the original transcribed template strand. 3' to 5' DNA or RNA During transcription, the original template strand is usually read from the 3' to the 5' end from beginning to end. Subgenomic mRNAs are created when transcription begins at the 3' end of the template strand (or 5' of the to-be-newly synthesized template) and begins to copy towards the 5' end of the template strand before "jumping" to the end of the template and copying the last nucleotides of the 5' end of the template, (finishing the 3' tail for the newly created strand). As a result, the translated strand will have a similar 5' end to varying degrees with the original template (depending on which part of the template the transcription jumped over) and a similar 3' end to the template. 5' to 3' (positive sense) viral RNA Positive-sense (5' to 3') viral RNA which may be directly translated into the desired viral proteins, undergoes a similar process as described ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Coronavirus 3′ UTR
Coronavirus genomes are Positive-sense single-stranded RNA virus, positive-sense single-stranded RNA molecules with an untranslated region (UTR) at the Directionality (molecular biology), 3′ end which is called the Three prime untranslated region, 3′ UTR. The 3′ UTR is responsible for important biological functions, such as viral Viral replication, replication. The 3′ UTR has a conserved RNA Nucleic acid secondary structure, secondary structure but different Coronavirus genera (alphacoronavirus, Alpha-, betacoronavirus, Beta-, gammacoronavirus, Gamma-, and Deltacoronavirus (genus), Deltacoronaviruses) have different structural features described below. Alphacoronavirus 3′ UTR The 3′ UTR of Alphacoronaviruses consists of two small hairpins (PK-SL2) which can form an alternate conformation (PK-SL1) where the loop region of the second hairpin interacts with the stem of the first hairpin (see Coronavirus 3′ UTR pseudoknot). PK-SL2 has been confirmed in Human coronaviru ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
RF03119
Radio frequency (RF) is the oscillation rate of an alternating electric current or voltage or of a magnetic, electric or electromagnetic field or mechanical system in the frequency range from around to around . This is roughly between the upper limit of audio frequencies that humans can hear (though these are not electromagnetic) and the lower limit of infrared frequencies, and also encompasses the microwave range. These are the frequencies at which energy from an oscillating current can radiate off a conductor into space as radio waves, so they are used in radio technology, among other uses. Different sources specify different upper and lower bounds for the frequency range. Electric current Electric currents that oscillate at radio frequencies (RF currents) have special properties not shared by direct current or lower audio frequency alternating current, such as the 50 or 60 Hz current used in electrical power distribution. * Energy from RF currents in conductors can ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Gammacoronavirus
''Gammacoronavirus'' (Gamma-CoV) is one of the four genera (''Alphacoronavirus, Alpha''-, ''Betacoronavirus, Beta-'', ''Gamma-'', and ''Deltacoronavirus (genus), Delta-'') of coronaviruses. It is in the subfamily ''Orthocoronavirinae'' of the family ''Coronaviridae''. They are Viral envelope, enveloped, Sense (molecular biology), positive-sense, Base pair, single-stranded RNA viruses of Zoonosis, zoonotic origin. Coronaviruses infect both animals and humans. While the alpha and beta genera are derived from the bat gene pool, the gamma and delta genera are derived from the avian and pig gene pools. Gamma-CoV also known as coronavirus group 3 are the avian coronaviruses. Taxonomy The genus contains the following subgenera and species: * Subgenus: ''Brangacovirus'' ** ''Gammacoronavirus brantae'', Goose coronavirus CB17 * Subgenus: ''Cegacovirus'' ** ''Gammacoronavirus delphinapteri'', Beluga whale coronavirus SW1 * Subgenus: ''Igacovirus'' ** ''Gammacoronavirus anatis'', Duck co ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Pp1a
ORF1ab (also ORF1a/b) refers collectively to two open reading frames (ORFs), ORF1a and ORF1b, that are conserved in the genomes of nidoviruses, a group of viruses that includes coronaviruses. The genes express large polyproteins that undergo proteolysis to form several nonstructural proteins with various functions in the viral life cycle, including proteases and the components of the replicase-transcriptase complex (RTC). Together the two ORFs are sometimes referred to as the replicase gene. They are related by a programmed ribosomal frameshift that allows the ribosome to continue translating past the stop codon at the end of ORF1a, in a -1 reading frame. The resulting polyproteins are known as pp1a and pp1ab. Expression ORF1a is the first open reading frame at the 5' end of the genome. Together ORF1ab occupies about two thirds of the genome, with the remaining third at the 3' end encoding the structural proteins and accessory proteins. It is translated from a 5' capped RNA ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Polyprotein
Proteolysis is the breakdown of proteins into smaller polypeptides or amino acids. Protein degradation is a major regulatory mechanism of gene expression and contributes substantially to shaping mammalian proteomes. Uncatalysed, the hydrolysis of peptide bonds is extremely slow, taking hundreds of years. Proteolysis is typically catalysed by cellular enzymes called proteases, but may also occur by intra-molecular digestion. Proteolysis in organisms serves many purposes; for example, digestive enzymes break down proteins in food to provide amino acids for the organism, while proteolytic processing of a polypeptide chain after its synthesis may be necessary for the production of an active protein. It is also important in the regulation of some physiological and cellular processes including apoptosis, as well as preventing the accumulation of unwanted or misfolded proteins in cells. Consequently, abnormality in the regulation of proteolysis can cause diseases. Proteolysis can also ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Severe Acute Respiratory Syndrome Coronavirus 2
Severe acute respiratory syndrome coronavirus 2 (SARS‑CoV‑2) is a strain of coronavirus that causes COVID-19, the respiratory illness responsible for the COVID-19 pandemic. The virus previously had the Novel coronavirus, provisional name 2019 novel coronavirus (2019-nCoV), and has also been called human coronavirus 2019 (HCoV-19 or hCoV-19). First identified in the city of Wuhan, Hubei, China, the World Health Organization designated the outbreak a public health emergency of international concern from January 30, 2020, to May 5, 2023. SARS‑CoV‑2 is a positive-sense single-stranded RNA virus that is Contagious disease, contagious in humans. SARS‑CoV‑2 is a strain of the species ''Betacoronavirus pandemicum'' (SARSr-CoV), as is SARS-CoV-1, the virus that caused the 2002–2004 SARS outbreak. There are animal-borne coronavirus strains more closely related to SARS-CoV-2, the most closely known relative being the BANAL-52 bat coronavirus. SARS-CoV-2 is of Zoonosis, z ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Murine Coronavirus
Murine coronavirus (M-CoV) is a virus in the genus ''Betacoronavirus'' that infects mice. Belonging to the subgenus ''Embecovirus'', murine coronavirus strains are :wikt:enterotropic, enterotropic or polytropic. Enterotropic strains include mouse hepatitis virus (MHV) strains D, Y, RI, and DVIM, whereas polytropic strains, such as JHM and A59, primarily cause hepatitis, enteritis, and encephalitis. Murine coronavirus is an important pathogen in the laboratory mouse and the laboratory rat. It is the most studied coronavirus in animals other than humans, and has been used as an animal disease model for many virological and clinical studies. Types Murine hepatitis virus Murine coronavirus was first discovered in 1949. The researchers isolated the virus from the brain, spinal cord, liver, lung, spleen, and kidney of a rat with symptoms of encephalitis and severe myelin injury, and gave it the strain name mouse hepatitis virus (MHV)-JHM. MHV is now the most studied coronavirus in anim ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bovine Coronavirus
Bovine coronavirus (BCV or BCoV) is a coronavirus which is a member of the species '' Betacoronavirus gravedinis''. The infecting virus is an enveloped, positive-sense, single-stranded RNA virus which enters its host cell by binding to the N-acetyl-9-O-acetylneuraminic acid receptor. Infection causes calf enteritis and contributes to the enzootic pneumonia complex in calves. It can also cause winter dysentery in adult cattle. It can infect both domestic and wild ruminants and has a worldwide distribution. Transmission is horizontal, via oro-fecal or respiratory routes. Like other coronaviruses from genus '' Betacoronavirus,'' subgenus '' Embecovirus'', it has a surface protein called hemagglutinin esterase (HE) in addition to the four structural proteins shared by all coronaviruses ( spike, membrane, nucleocapsid, and envelope proteins). Virology BCoV has 95% similarity with human coronavirus OC43 and 93% to porcine hemagglutinating encephalomyelitis virus. According to ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Severe Acute Respiratory Syndrome Coronavirus
Severe acute respiratory syndrome coronavirus 1 (SARS-CoV-1), previously known as severe acute respiratory syndrome coronavirus (SARS-CoV), is a strain of coronavirus that causes severe acute respiratory syndrome (SARS), the respiratory illness responsible for the 2002–2004 SARS outbreak. It is an enveloped, positive-sense, single-stranded RNA virus that infects the epithelial cells within the lungs. The virus enters the host cell by binding to angiotensin-converting enzyme 2. It infects humans, bats, and palm civets. The SARS-CoV-1 outbreak was largely brought under control by simple public health measures. Testing people with symptoms (fever and respiratory problems), isolating and quarantining suspected cases, and restricting travel all had an effect. SARS-CoV-1 was most transmissible when patients were sick, so its spread could be effectively suppressed by isolating patients with symptoms. On April 16, 2003, following the outbreak of SARS in Asia and secondary ca ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Betacoronavirus
''Betacoronavirus'' (β-CoVs or Beta-CoVs) is one of four genera (''Alphacoronavirus, Alpha''-, ''Beta-'', ''Gammacoronavirus, Gamma-'', and ''Deltacoronavirus (genus), Delta-'') of coronaviruses. Member viruses are Viral envelope, enveloped, positive-strand RNA viruses that infect mammals, including humans. The natural reservoir for betacoronaviruses are bats and rodents. Rodents are the reservoir for the subgenus ''Embecovirus'', while Bat virome, bats are the reservoir for the other subgenera. The coronavirus genera are each composed of varying viral lineages with the betacoronavirus genus containing four such lineages: A, B, C, D. In older literature, this genus is also known as "group 2 coronaviruses". The genus is in the subfamily ''Orthocoronavirinae'' in the family ''Coronaviridae'', of the order ''Nidovirales''. The betacoronaviruses of the greatest clinical importance concerning humans are Human coronavirus OC43, OC43 and Human coronavirus HKU1, HKU1 (which can cause ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
