Halothiobacillus Neapolitanus
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Halothiobacillus Neapolitanus
''Halothiobacillus'' is a genus in the '' Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halotolerant; they live in environments with high concentrations of salt or other solutes, but don't require them in order to grow. The type species of this genus, '' Halothiobacillus neapolitanus'' used to be members of the genus ''Thiobacillus'', before they were reclassified in 2000.Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated genera ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus'' gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500. A further two former ''Thiobacillus'' spp. were also reclassified as '' Halothiobacillus halophilus'' and '' Halothiobacillus hydrothermalis'', both of which were obligate halophiles rather than being halotolerant and showed comparatively low 16S rRNA gene identity to '' Halothiobacillus ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulp ...
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Halophile
The halophiles, named after the Greek word for "salt-loving", are extremophiles that thrive in high salt concentrations. While most halophiles are classified into the domain Archaea, there are also bacterial halophiles and some eukaryotic species, such as the alga '' Dunaliella salina'' and fungus '' Wallemia ichthyophaga''. Some well-known species give off a red color from carotenoid compounds, notably bacteriorhodopsin. Halophiles can be found in water bodies with salt concentration more than five times greater than that of the ocean, such as the Great Salt Lake in Utah, Owens Lake in California, the Urmia Lake in Iran, the Dead Sea, and in evaporation ponds. They are theorized to be a possible analogues for modeling extremophiles that might live in the salty subsurface water ocean of Jupiter's Europa and similar moons. Classification Halophiles are categorized by the extent of their halotolerance: slight, moderate, or extreme. Slight halophiles prefer 0.3 to 0.8 M (1.7 to ...
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RuBisCO
Ribulose-1,5-bisphosphate carboxylase-oxygenase, commonly known by the abbreviations RuBisCo, rubisco, RuBPCase, or RuBPco, is an enzyme () involved in the first major step of carbon fixation, a process by which atmospheric carbon dioxide is converted by plants and other photosynthetic organisms to energy-rich molecules such as glucose. In chemical terms, it catalyzes the carboxylation of ribulose-1,5-bisphosphate (also known as RuBP). It is probably the most abundant enzyme on Earth. Alternative carbon fixation pathways RuBisCO is important biologically because it catalyzes the primary chemical reaction by which inorganic carbon enters the biosphere. While many autotrophic bacteria and archaea fix carbon via the reductive acetyl CoA pathway, the 3-hydroxypropionate cycle, or the reverse Krebs cycle, these pathways are relatively small contributors to global carbon fixation compared to that catalyzed by RuBisCO. Phosphoenolpyruvate carboxylase, unlike RuBisCO, only tempora ...
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Carboxysome
Carboxysomes are bacterial microcompartments (BMCs) consisting of polyhedral protein shells filled with the enzymes ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO)—the predominant enzyme in carbon fixation and the rate limiting enzyme in the Calvin cycle—and carbonic anhydrase. Carboxysomes are thought to have evolved as a consequence of the increase in oxygen concentration in the ancient atmosphere; this is because oxygen is a competing substrate to carbon dioxide in the RuBisCO reaction. To overcome the inefficiency of RuBisCO, carboxysomes concentrate carbon dioxide inside the shell by means of co-localized carbonic anhydrase activity, which produces carbon dioxide from the bicarbonate that diffuses into the carboxysome. The resulting concentration of carbon dioxide near RuBisCO decreases the proportion of ribulose-1,5-bisphosphate oxygenation and thereby avoids costly photorespiratory reactions. The surrounding shell provides a barrier to carbon dioxide ...
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Australia
Australia, officially the Commonwealth of Australia, is a Sovereign state, sovereign country comprising the mainland of the Australia (continent), Australian continent, the island of Tasmania, and numerous List of islands of Australia, smaller islands. With an area of , Australia is the largest country by area in Oceania and the world's List of countries and dependencies by area, sixth-largest country. Australia is the oldest, flattest, and driest inhabited continent, with the least fertile soils. It is a Megadiverse countries, megadiverse country, and its size gives it a wide variety of landscapes and climates, with Deserts of Australia, deserts in the centre, tropical Forests of Australia, rainforests in the north-east, and List of mountains in Australia, mountain ranges in the south-east. The ancestors of Aboriginal Australians began arriving from south east Asia approximately Early human migrations#Nearby Oceania, 65,000 years ago, during the Last Glacial Period, last i ...
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Melbourne
Melbourne ( ; Boonwurrung/Woiwurrung: ''Narrm'' or ''Naarm'') is the capital and most populous city of the Australian state of Victoria, and the second-most populous city in both Australia and Oceania. Its name generally refers to a metropolitan area known as Greater Melbourne, comprising an urban agglomeration of 31 local municipalities, although the name is also used specifically for the local municipality of City of Melbourne based around its central business area. The metropolis occupies much of the northern and eastern coastlines of Port Phillip Bay and spreads into the Mornington Peninsula, part of West Gippsland, as well as the hinterlands towards the Yarra Valley, the Dandenong and Macedon Ranges. It has a population over 5 million (19% of the population of Australia, as per 2021 census), mostly residing to the east side of the city centre, and its inhabitants are commonly referred to as "Melburnians". The area of Melbourne has been home to Aboriginal ...
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Autotrophic
An autotroph or primary producer is an organism that produces complex organic compounds (such as carbohydrates, fats, and proteins) using carbon from simple substances such as carbon dioxide,Morris, J. et al. (2019). "Biology: How Life Works", 3rd edition, W. H. Freeman. generally using energy from light (photosynthesis) or inorganic chemical reactions ( chemosynthesis). They convert an abiotic source of energy (e.g. light) into energy stored in organic compounds, which can be used by other organisms (e.g. heterotrophs). Autotrophs do not need a living source of carbon or energy and are the producers in a food chain, such as plants on land or algae in water (in contrast to heterotrophs as consumers of autotrophs or other heterotrophs). Autotrophs can reduce carbon dioxide to make organic compounds for biosynthesis and as stored chemical fuel. Most autotrophs use water as the reducing agent, but some can use other hydrogen compounds such as hydrogen sulfide. The primary ...
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Krebs Cycle
The citric acid cycle (CAC)—also known as the Krebs cycle or the TCA cycle (tricarboxylic acid cycle)—is a series of chemical reactions to release stored energy through the oxidation of acetyl-CoA derived from carbohydrates, fats, and proteins. The Krebs cycle is used by organisms that respire (as opposed to organisms that ferment) to generate energy, either by anaerobic respiration or aerobic respiration. In addition, the cycle provides precursors of certain amino acids, as well as the reducing agent NADH, that are used in numerous other reactions. Its central importance to many biochemical pathways suggests that it was one of the earliest components of metabolism and may have originated abiogenically. Even though it is branded as a 'cycle', it is not necessary for metabolites to follow only one specific route; at least three alternative segments of the citric acid cycle have been recognized. The name of this metabolic pathway is derived from the citric acid (a tricarboxy ...
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Chemolithoautotrophic
A lithoautotroph is an organism which derives energy from reactions of reduced compounds of mineral (inorganic) origin. Two types of lithoautotrophs are distinguished by their energy source; photolithoautotrophs derive their energy from light while chemolithoautotrophs (chemolithotrophs or chemoautotrophs) derive their energy from chemical reactions. Chemolithoautotrophs are exclusively microbes. Photolithoautotrophs include macroflora such as plants; these do not possess the ability to use mineral sources of reduced compounds for energy. Most chemolithoautotrophs belong to the domain Bacteria, while some belong to the domain Archaea. Lithoautotrophic bacteria can only use inorganic molecules as substrates in their energy-releasing reactions. The term "lithotroph" is from Greek ''lithos'' (''λίθος'') meaning "rock" and ''trōphos'' (τροφοσ) meaning "consumer"; literally, it may be read "eaters of rock". The "lithotroph" part of the name refers to the fact that these or ...
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Guyparkeria Hydrothermalis
''Guyparkeria'' is a genus in the '' Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halophilic and have varying degrees of thermophilicity. They live in environments with high concentrations of salt or other solutes, such as in hydrothermal vent plumes or in hypersaline playas, and do require high sodium ion concentrations in order to grow, as is also the case in the other genus of the same family, '' Thioalkalibacter'' Both species of this genus were originally published as members of the genus ''Thiobacillus'', before they were reclassified in 2000 to ''Halothiobacillus'',Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated generus ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus ''Thermithiobacillus'' is a genus of nonsporeforming, rod-shaped, Gram-negative bacteria. The name derives from the Latin ''thermae'', for w ...
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Guyparkeria Halophila
''Guyparkeria'' is a genus in the '' Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halophilic and have varying degrees of thermophilicity. They live in environments with high concentrations of salt or other solutes, such as in hydrothermal vent plumes or in hypersaline playas, and do require high sodium ion concentrations in order to grow, as is also the case in the other genus of the same family, '' Thioalkalibacter'' Both species of this genus were originally published as members of the genus ''Thiobacillus'', before they were reclassified in 2000 to ''Halothiobacillus'',Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated generus ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus'' gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500. as '' Halothiobacillus halophilus'' and '' Halothiobacillus hydrothermalis'', bot ...
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Guyparkeria
''Guyparkeria'' is a genus in the '' Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halophilic and have varying degrees of thermophilicity. They live in environments with high concentrations of salt or other solutes, such as in hydrothermal vent plumes or in hypersaline playas, and do require high sodium ion concentrations in order to grow, as is also the case in the other genus of the same family, '' Thioalkalibacter'' Both species of this genus were originally published as members of the genus ''Thiobacillus'', before they were reclassified in 2000 to ''Halothiobacillus'',Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated generus ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus'' gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500. as '' Halothiobacillus halophilus'' and '' Halothiobacillus hydrothermalis'', bot ...
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