organism
In biology, an organism () is any living system that functions as an individual entity. All organisms are composed of cells (cell theory). Organisms are classified by taxonomy into groups such as multicellular animals, plants, and ...
that arises from
algae
Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular mic ...
or
cyanobacteria
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blu ...
fungi
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from ...
species in a mutualistic relationship.Introduction to Lichens – An Alliance between Kingdoms . University of California Museum of Paleontology. Lichens have properties different from those of their component organisms. They come in many colors, sizes, and forms and are sometimes plant-like, but are not
plant
Plants are predominantly photosynthetic eukaryotes of the kingdom Plantae. Historically, the plant kingdom encompassed all living things that were not animals, and included algae and fungi; however, all current definitions of Plantae exclud ...
s. They may have tiny, leafless branches (
fruticose
A fruticose lichen is a form of lichen fungi that is characterized by a coral-like shrubby or bushy growth structure. It is formed from a symbiotic relationship of a photobiont such as green algae or less commonly cyanobacteria and one, two or mor ...
); flat leaf-like structures (
foliose
Foliose lichen is one of the morphological classes of lichens, which are complex organisms that arise from the symbiotic relationship between fungi and a photosynthetic partner, typically algae. This partnership allows lichen to live in diverse ...
); grow crust-like, adhering tightly to a surface (substrate) like a thick coat of paint (
crustose
Crustose is a habit of some types of algae and lichens in which the organism grows tightly appressed to a substrate, forming a biological layer. ''Crustose'' adheres very closely to the substrates at all points. ''Crustose'' is found on rocks and ...
); have a powder-like appearance ( leprose); or other growth forms.
A ''macrolichen'' is a lichen that is either bush-like or leafy; all other lichens are termed ''microlichens''. Here, "macro" and "micro" do not refer to size, but to the growth form.Common names for lichens may contain the word ''
moss
Mosses are small, non-vascular flowerless plants in the taxonomic division Bryophyta (, ) '' sensu stricto''. Bryophyta (''sensu lato'', Schimp. 1879) may also refer to the parent group bryophytes, which comprise liverworts, mosses, and hor ...
'' (e.g., "
reindeer moss
''Cladonia rangiferina'', also known as reindeer cup lichen, reindeer lichen (cf. Swedish language, Sw. ''renlav'') or grey reindeer lichen, is a light-colored fruticose lichen, fruticose, Cladonia, cup lichen species in the family Cladoniaceae. ...
", "
Iceland moss
''Cetraria islandica'', also known as true Iceland lichen or Iceland moss, is an Arctic-alpine lichen whose erect or upright, leaflike habit gives it the appearance of a moss, where its name likely comes from.
Description
It is often of a pale ...
"), and lichens may superficially look like and grow with mosses, but they are not closely related to mosses or any plant.Brodo, Irwin M. and Duran Sharnoff, Sylvia (2001) ''Lichens of North America''. . Lichens do not have roots that absorb water and nutrients as plants do,Sharnoff, Stephen (2014) ''Field Guide to California Lichens'', Yale University Press. but like plants, they produce their own nutrition by
photosynthesis
Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored i ...
. When they grow on plants, they do not live as
parasite
Parasitism is a close relationship between species, where one organism, the parasite, lives on or inside another organism, the host, causing it some harm, and is adapted structurally to this way of life. The entomologist E. O. Wilson has ...
s, but instead use the plant's surface as a substrate.
Lichens occur from
sea level
Mean sea level (MSL, often shortened to sea level) is an average surface level of one or more among Earth's coastal bodies of water from which heights such as elevation may be measured. The global MSL is a type of vertical datuma standardised g ...
to high
alpine
Alpine may refer to any mountainous region. It may also refer to:
Places Europe
* Alps, a European mountain range
** Alpine states, which overlap with the European range
Australia
* Alpine, New South Wales, a Northern Village
* Alpine National Pa ...
elevations, in many environmental conditions, and can grow on almost any surface. They are abundant growing on bark,
leaves
A leaf (plural, : leaves) is any of the principal appendages of a vascular plant plant stem, stem, usually borne laterally aboveground and specialized for photosynthesis. Leaves are collectively called foliage, as in "autumn foliage", wh ...
, mosses, or other lichens and hanging from branches "living on thin air" (
epiphyte
An epiphyte is an organism that grows on the surface of a plant and derives its moisture and nutrients from the air, rain, water (in marine environments) or from debris accumulating around it. The plants on which epiphytes grow are called phoroph ...
s) in
rainforest
Rainforests are characterized by a closed and continuous tree canopy, moisture-dependent vegetation, the presence of epiphytes and lianas and the absence of wildfire. Rainforest can be classified as tropical rainforest or temperate rainfores ...
s and in
temperate woodland
A woodland () is, in the broad sense, land covered with trees, or in a narrow sense, synonymous with wood (or in the U.S., the ''plurale tantum'' woods), a low-density forest forming open habitats with plenty of sunlight and limited shade (see ...
. They grow on rock, walls,
gravestones
A headstone, tombstone, or gravestone is a stele or marker, usually stone, that is placed over a grave. It is traditional for burials in the Christian, Jewish, and Muslim religions, among others. In most cases, it has the deceased's name, d ...
,
roof
A roof ( : roofs or rooves) is the top covering of a building, including all materials and constructions necessary to support it on the walls of the building or on uprights, providing protection against rain, snow, sunlight, extremes of temper ...
s, exposed soil surfaces, rubber, bones, and in the soil as part of
biological soil crust
Biological soil crusts are communities of living organisms on the soil surface in arid and semi-arid ecosystems. They are found throughout the world with varying species composition and cover depending on topography, soil characteristics, climate, ...
s. Various lichens have adapted to survive in some of the most extreme environments on Earth:
arctic tundra
In physical geography, tundra () is a type of biome where tree growth is hindered by frigid temperatures and short growing seasons. The term ''tundra'' comes through Russian (') from the Kildin Sámi word (') meaning "uplands", "treeless moun ...
, hot dry
desert
A desert is a barren area of landscape where little precipitation occurs and, consequently, living conditions are hostile for plant and animal life. The lack of vegetation exposes the unprotected surface of the ground to denudation. About on ...
s,
rocky coast
A cliffed coast, also called an abrasion coast, is a form of coast where the action of marine waves has formed steep cliffs that may or may not be precipitous. It contrasts with a flat or alluvial coast.
Formation
In coastal areas in whic ...
s, and toxic
slag
Slag is a by-product of smelting (pyrometallurgical) ores and used metals. Broadly, it can be classified as ferrous (by-products of processing iron and steel), ferroalloy (by-product of ferroalloy production) or non-ferrous/base metals (by-prod ...
heaps. They can even live inside solid rock, growing between the grains.
It is estimated that 6–8% of Earth's land surface is covered by lichens. There are about 20,000 known species.Some lichens have lost the ability to reproduce sexually, yet continue to
speciate
Speciation is the evolutionary process by which populations evolve to become distinct species. The biologist Orator F. Cook coined the term in 1906 for cladogenesis, the splitting of lineages, as opposed to anagenesis, phyletic evolution within ...
. They can be seen as being relatively self-contained miniature ecosystems, where the fungi, algae, or cyanobacteria have the potential to engage with other
microorganism
A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in olde ...
s in a functioning system that may evolve as an even more complex composite organism. Lichens may be long-lived, with some considered to be among the oldest living things. They are among the first living things to grow on fresh rock exposed after an event such as a landslide. The long life-span and slow and regular growth rate of some species can be used to date events (
lichenometry
In archaeology, palaeontology, and geomorphology, lichenometry is a geomorphic method of geochronologic dating that uses lichen growth to determine the age of exposed rock, based on a presumed specific rate of increase in radial size over time.L ...
).
Etymology and pronunciation
The English word ''lichen'' derives from the
Greek
Greek may refer to:
Greece
Anything of, from, or related to Greece, a country in Southern Europe:
*Greeks, an ethnic group.
*Greek language, a branch of the Indo-European language family.
**Proto-Greek language, the assumed last common ancestor ...
("tree moss, lichen, lichen-like eruption on skin") via
Latin
Latin (, or , ) is a classical language belonging to the Italic branch of the Indo-European languages. Latin was originally a dialect spoken in the lower Tiber area (then known as Latium) around present-day Rome, but through the power of the ...
. The Greek noun, which literally means "licker", derives from the verb , "to lick". In American English, "lichen" is pronounced the same as the verb "liken" (). In British English, both this pronunciation and one rhyming with "kitchen" () are used.
Anatomy and morphology
Growth forms
Lichens grow in a wide range of shapes and forms ( morphologies). The shape of a lichen is usually determined by the organization of the fungal filaments. The nonreproductive tissues, or vegetative body parts, are called the ''thallus''. Lichens are grouped by thallus type, since the thallus is usually the most visually prominent part of the lichen. Thallus growth forms typically correspond to a few basic internal structure types. Common names for lichens often come from a growth form or color that is typical of a lichen
genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus com ...
.
Common groupings of lichen thallus growth forms are:
#
fruticose
A fruticose lichen is a form of lichen fungi that is characterized by a coral-like shrubby or bushy growth structure. It is formed from a symbiotic relationship of a photobiont such as green algae or less commonly cyanobacteria and one, two or mor ...
– growing like a tuft or multiple-branched leafless mini-shrub, upright or hanging down, 3-dimensional branches with nearly round cross section (
terete
Terete is a term in botany used to describe a cross section that is circular, or like a distorted circle, with a single surface wrapping around it.Lichen Vocabulary, Lichens of North America Information, Sylvia and Stephen Sharnoff/ref> This is us ...
) or flattened
#
foliose
Foliose lichen is one of the morphological classes of lichens, which are complex organisms that arise from the symbiotic relationship between fungi and a photosynthetic partner, typically algae. This partnership allows lichen to live in diverse ...
– growing in 2-dimensional, flat, leaf-like lobes
#
crustose
Crustose is a habit of some types of algae and lichens in which the organism grows tightly appressed to a substrate, forming a biological layer. ''Crustose'' adheres very closely to the substrates at all points. ''Crustose'' is found on rocks and ...
– crust-like, adhering tightly to a surface ( substrate) like a thick coat of paint
#
squamulose
A squamulose lichen is a lichen that is composed of small, often overlapping "scales" called squamules. If they are raised from the substrate and appear leafy, the lichen may appear to be a foliose lichen, but the underside does not have a "skin ...
– formed of small leaf-like scales crustose below but free at the tips
# leprose – powdery
#
gelatinous
Gelatin or gelatine (from la, gelatus meaning "stiff" or "frozen") is a translucent, colorless, flavorless food ingredient, commonly derived from collagen taken from animal body parts. It is brittle when dry and rubbery when moist. It may also ...
– jelly-like
#
filamentous
The word filament, which is descended from Latin ''filum'' meaning " thread", is used in English for a variety of thread-like structures, including:
Astronomy
* Galaxy filament, the largest known cosmic structures in the universe
* Solar filament ...
– stringy or like matted hair
# byssoid – wispy, like
teased wool
Carding is a mechanical process that disentangles, cleans and intermixes fibres to produce a continuous web or sliver suitable for subsequent processing. This is achieved by passing the fibres between differentially moving surfaces covered wit ...
# structureless
There are variations in growth types in a single lichen species, grey areas between the growth type descriptions, and overlapping between growth types, so some authors might describe lichens using different growth type descriptions.
When a crustose lichen gets old, the center may start to crack up like old-dried paint, old-broken asphalt paving, or like the polygonal "islands" of cracked-up mud in a dried lakebed. This is called being
rimose
''Rimose'' is an adjective used to describe a surface that is cracked or fissured.areolate
Lichens are composite organisms made up of multiple species: a fungal partner, one or more photosynthetic partners, and sometimes a basidiomycete yeast. They are regularly grouped by their external appearance – a characteristic known as their ...
, and the "island" pieces separated by the cracks are called areolas. The areolas appear separated, but are (or were) connected by an underlying
prothallus
A prothallus, or prothallium, (from Latin ''pro'' = forwards and Greek ''θαλλος'' (''thallos'') = twig) is usually the gametophyte stage in the life of a fern or other pteridophyte. Occasionally the term is also used to describe the young ...
or
hypothallus
In true slime molds (myxogastria), lichens, and in species of the family Clavicipitaceae, the hypothallus is the layer on which the fruit body sits, lying in contact with the substrate. The word is derived from the Ancient Greek root ''hypó'' ("u ...
. When a crustose lichen grows from a center and appears to radiate out, it is called crustose placodioid. When the edges of the areolas lift up from the substrate, it is called
squamulose
A squamulose lichen is a lichen that is composed of small, often overlapping "scales" called squamules. If they are raised from the substrate and appear leafy, the lichen may appear to be a foliose lichen, but the underside does not have a "skin ...
.
These growth form groups are not precisely defined. Foliose lichens may sometimes branch and appear to be fruticose. Fruticose lichens may have flattened branching parts and appear leafy. Squamulose lichens may appear where the edges lift up. Gelatinous lichens may appear leafy when dry. Means of telling them apart in these cases are in the sections below.
Structures involved in reproduction often appear as discs, bumps, or squiggly lines on the surface of the thallus. The thallus is not always the part of the lichen that is most visually noticeable. Some lichens can grow ''inside'' solid rock between the grains (
endolithic lichen An endolithic lichen is a crustose
Crustose is a habit of some types of algae and lichens in which the organism grows tightly appressed to a substrate, forming a biological layer. ''Crustose'' adheres very closely to the substrates at all points. ...
s), with only the sexual fruiting part visible growing outside the rock. These may be dramatic in color or appearance. Forms of these sexual parts are not in the above growth form categories.Lichen Vocabulary, Lichens of North America Information, Sylvia and Stephen Sharnoff The most visually noticeable reproductive parts are often circular, raised, plate-like or disc-like outgrowths, with crinkly edges, and are described in sections below.
Color
Lichens come in many colors. Coloration is usually determined by the photosynthetic component. Special pigments, such as yellow
usnic acid
Usnic acid is a naturally occurring dibenzofuran derivative found in several lichen species with the formula C18H16O7. It was first isolated by German scientist W. Knop in 1844 and first synthesized between 1933-1937 by Curd and Robertson. Usnic a ...
, give lichens a variety of colors, including reds, oranges, yellows, and browns, especially in exposed, dry habitats. In the absence of special pigments, lichens are usually bright green to olive gray when wet, gray or grayish-green to brown when dry. This is because moisture causes the surface skin (
cortex
Cortex or cortical may refer to:
Biology
* Cortex (anatomy), the outermost layer of an organ
** Cerebral cortex, the outer layer of the vertebrate cerebrum, part of which is the ''forebrain''
*** Motor cortex, the regions of the cerebral cortex i ...
) to become more transparent, exposing the green photobiont layer. Different colored lichens covering large areas of exposed rock surfaces, or lichens covering or hanging from bark can be a spectacular display when the patches of diverse colors "come to life" or "glow" in brilliant displays following rain.
Different colored lichens may inhabit different adjacent sections of a rock face, depending on the angle of exposure to light. Colonies of lichens may be spectacular in appearance, dominating much of the surface of the visual landscape in forests and natural places, such as the vertical "paint" covering the vast rock faces of
Yosemite National Park
Yosemite National Park ( ) is an American national park in California, surrounded on the southeast by Sierra National Forest and on the northwest by Stanislaus National Forest. The park is managed by the National Park Service and covers an ar ...
.
Color is used in identification.Michigan Lichens, Julie Jones Medlin, B. Jain Publishers, 1996, , 9780877370390 The color of a lichen changes depending on whether the lichen is wet or dry. Color descriptions used for identification are based on the color that shows when the lichen is dry. Dry lichens with a cyanobacterium as the photosynthetic partner tend to be dark grey, brown, or black.
The underside of the leaf-like lobes of foliose lichens is a different color from the top side (
dorsiventral A dorsiventral (Lat. ''dorsum'', "the back", ''venter'', "the belly") Organ (anatomy), organ is one that has two surfaces differing from each other in appearance and structure, as an ordinary leaf. This term has also been used as a synonym for dorso ...
), often brown or black, sometimes white. A fruticose lichen may have flattened "branches", appearing similar to a foliose lichen, but the underside of a leaf-like structure on a fruticose lichen is the ''same'' color as the top side. The leaf-like lobes of a foliose lichen may branch, giving the appearance of a fruticose lichen, but the underside will be a ''different'' color from the top side.
The sheen on some jelly-like gelatinous lichens is created by
mucilaginous
Mucilage is a thick, gluey substance produced by nearly all plants and some microorganisms. These microorganisms include protists which use it for their locomotion. The direction of their movement is always opposite to that of the secretion of m ...
secretions.
Internal structure
A lichen consists of a simple photosynthesizing organism, usually a
green alga
The green algae (singular: green alga) are a group consisting of the Prasinodermophyta and its unnamed sister which contains the Chlorophyta and Charophyta/Streptophyta. The land plants (Embryophytes) have emerged deep in the Charophyte alga as ...
or
cyanobacterium
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue ...
, surrounded by filaments of a fungus. Generally, most of a lichen's bulk is made of interwoven fungal filaments,Lichens: More on Morphology, University of California Museum of Paleontology but this is reversed in filamentous and gelatinous lichens. The fungus is called a ''mycobiont''. The photosynthesizing organism is called a ''photobiont''. Algal photobionts are called ''phycobionts''. Cyanobacteria photobionts are called ''cyanobionts''.
The part of a lichen that is not involved in reproduction, the "body" or "vegetative tissue" of a lichen, is called the ''thallus''. The thallus form is very different from any form where the fungus or alga are growing separately. The thallus is made up of filaments of the fungus called ''
hyphae
A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium.
Structure
A hypha consists of one or ...
''. The filaments grow by branching then rejoining to create a mesh, which is called being " anastomosed". The mesh of fungal filaments may be dense or loose.
Generally, the fungal mesh surrounds the algal or
cyanobacterial
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue ...
cells, often enclosing them within complex fungal tissues that are unique to lichen associations. The thallus may or may not have a protective "skin" of densely packed fungal filaments, often containing a second fungal species, which is called a ''cortex.'' Fruticose lichens have one cortex layer wrapping around the "branches". Foliose lichens have an upper cortex on the top side of the "leaf", and a separate lower cortex on the bottom side. Crustose and squamulose lichens have only an upper cortex, with the "inside" of the lichen in direct contact with the surface they grow on (the ''substrate''). Even if the edges peel up from the substrate and appear flat and leaf-like, they lack a lower cortex, unlike foliose lichens. Filamentous, byssoid, leprose, gelatinous, and other lichens do not have a cortex, which is called being
ecorticate
A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.
Fruticose, foliose, crustose, and squamulose lichens generally have up to three different types of tissue, differentiated by having different densities of fungal filaments. The top layer, where the lichen contacts the environment, is called a ''cortex''. The cortex is made of densely tightly woven, packed, and glued together ( agglutinated) fungal filaments. The dense packing makes the cortex act like a protective "skin", keeping other organisms out, and reducing the intensity of sunlight on the layers below. The cortex layer can be up to several hundred micrometers (μm) in thickness (less than a millimeter). The cortex may be further topped by an epicortex of secretions, not cells, 0.6–1 μm thick in some lichens. This secretion layer may or may not have pores.
Below the cortex layer is a layer called the ''photobiontic layer'' or ''symbiont layer''. The symbiont layer has less densely packed fungal filaments, with the photosynthetic partner embedded in them. The less dense packing allows air circulation during photosynthesis, similar to the anatomy of a leaf. Each cell or group of cells of the photobiont is usually individually wrapped by hyphae, and in some cases penetrated by a
haustorium
In botany and mycology, a haustorium (plural haustoria) is a rootlike structure that grows into or around another structure to absorb water or nutrients. For example, in mistletoe or members of the broomrape family, the structure penetrates t ...
. In crustose and foliose lichens, algae in the photobiontic layer are diffuse among the fungal filaments, decreasing in gradation into the layer below. In fruticose lichens, the photobiontic layer is sharply distinct from the layer below.
The layer beneath the symbiont layer called is called the ''
medulla
Medulla or Medullary may refer to:
Science
* Medulla oblongata, a part of the brain stem
* Renal medulla, a part of the kidney
* Adrenal medulla, a part of the adrenal gland
* Medulla of ovary, a stroma in the center of the ovary
* Medulla of th ...
''. The medulla is less densely packed with fungal filaments than the layers above. In foliose lichens, there is usually, as in ''
Peltigera
''Peltigera'' is a genus of approximately 100 species of foliose lichens in the family Peltigeraceae. Commonly known as the dog or pelt lichens, species of ''Peltigera'' are often terricolous (growing on soil), but can also occur on moss, trees, ...
'', another densely packed layer of fungal filaments called the lower cortex. Root-like fungal structures called ''rhizines'' ( usually) grow from the lower cortex to attach or anchor the lichen to the substrate. Fruticose lichens have a single cortex wrapping all the way around the "stems" and "branches". The medulla is the lowest layer, and may form a cottony white inner core for the branchlike thallus, or it may be hollow. Crustose and squamulose lichens lack a lower cortex, and the medulla is in direct contact with the substrate that the lichen grows on.
In crustose areolate lichens, the edges of the areolas peel up from the substrate and appear leafy. In squamulose lichens the part of the lichen thallus that is not attached to the substrate may also appear leafy. But these leafy parts lack a lower cortex, which distinguishes crustose and squamulose lichens from foliose lichens. Conversely, foliose lichens may appear flattened against the substrate like a crustose lichen, but most of the leaf-like lobes can be lifted up from the substrate because it is separated from it by a tightly packed lower cortex.
Gelatinous, byssoid, and leprose lichens lack a cortex (are
ecorticate
A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.cephalodia {{Short description, Morphological structure found in some lichens
Cephalodia (singular cephalodium) are small gall-like structures found in some species of lichens that contain cyanobacterial symbionts
Symbiosis (from Greek , , "living toget ...
''.
''
Pruinia Pruinescence , or pruinosity, is a "frosted" or dusty-looking coating on top of a surface. It may also be called a pruina (plural: ''pruinae''), from the Latin word for hoarfrost. The adjectival form is pruinose .
Entomology
In insects, a "blo ...
'' is a whitish coating on top of an upper surface. An ''
epinecral layer
A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.lumina
Lumina may refer to:
Arts, entertainment, and media Literature
* ''Lumina'', a literary journal published by Sarah Lawrence College
* ''World of Lumina'' or ''Lumina'', a graphic novel by Emanuele Tenderini and Linda Cavallini
Music
* "Lumina", ...
in or near the cortex above the algal layer".
In August 2016, it was reported that some macrolichens have more than one species of fungus in their tissues.
Physiology
Symbiotic relation
A lichen is a composite organism that emerges from
algae
Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular mic ...
or
cyanobacteria
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blu ...
living among the filaments (
hyphae
A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium.
Structure
A hypha consists of one or ...
) of the
fungi
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from ...
in a mutually beneficial
symbiotic
Symbiosis (from Greek , , "living together", from , , "together", and , bíōsis, "living") is any type of a close and long-term biological interaction between two different biological organisms, be it mutualistic, commensalistic, or parasit ...
relationship. The fungi benefit from the carbohydrates produced by the algae or cyanobacteria via
photosynthesis
Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored i ...
. The algae or cyanobacteria benefit by being protected from the environment by the filaments of the fungi, which also gather moisture and nutrients from the environment, and (usually) provide an anchor to it. Although some photosynthetic partners in a lichen can survive outside the lichen, the lichen symbiotic association extends the ecological range of both partners, whereby most descriptions of lichen associations describe them as symbiotic. Both partners gain water and mineral nutrients mainly from the atmosphere, through rain and dust. The fungal partner protects the alga by retaining water, serving as a larger capture area for mineral nutrients and, in some cases, provides minerals obtained from the substrate. If a
cyanobacterium
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue ...
is present, as a primary partner or another symbiont in addition to a green alga as in certain
tripartite
Tripartite means composed of or split into three parts, or refers to three parties. Specifically, it may also refer to any of the following:
* 3 (number)
* Tripartite language
* Tripartite motto
* Tripartite System in British education
* Triparti ...
lichens, they can fix atmospheric nitrogen, complementing the activities of the green alga.
In three different lineages the fungal partner has independently lost the mitochondrial gene atp9, which has key functions in mitochondrial energy production. The loss makes the fungi completely dependent on their symbionts.
The algal or cyanobacterial cells are
photosynthetic
Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored in c ...
and, as in plants, they
reduce
Reduction, reduced, or reduce may refer to:
Science and technology Chemistry
* Reduction (chemistry), part of a reduction-oxidation (redox) reaction in which atoms have their oxidation state changed.
** Organic redox reaction, a redox react ...
atmospheric
carbon dioxide
Carbon dioxide (chemical formula ) is a chemical compound made up of molecules that each have one carbon atom covalently double bonded to two oxygen atoms. It is found in the gas state at room temperature. In the air, carbon dioxide is transpar ...
into organic carbon sugars to feed both symbionts. Phycobionts (algae) produce
sugar alcohols
Sugar alcohols (also called polyhydric alcohols, polyalcohols, alditols or glycitols) are organic compounds, typically derivative (chemistry), derived from sugars, containing one hydroxyl group (–OH) attached to each carbon atom. They are whit ...
(
ribitol
Ribitol, or adonitol, is a crystalline pentose alcohol (C5H12O5) formed by the reduction of ribose. It occurs naturally in the plant ''Adonis vernalis'' as well as in the cell walls of some Gram-positive bacteria, in the form of ribitol phosphat ...
,
sorbitol
Sorbitol (), less commonly known as glucitol (), is a sugar alcohol with a sweet taste which the human body metabolizes slowly. It can be obtained by reduction of glucose, which changes the converted aldehyde group (−CHO) to a primary alcohol g ...
, and
erythritol
Erythritol is an organic compound, a four-carbon sugar alcohol (or polyol) with no optical activity, used as a food additive and sugar substitute. It is naturally occurring. It can be made from corn using enzymes and fermentation. Its formula i ...
), which are absorbed by the mycobiont (fungus). Cyanobionts produce
glucose
Glucose is a simple sugar with the molecular formula . Glucose is overall the most abundant monosaccharide, a subcategory of carbohydrates. Glucose is mainly made by plants and most algae during photosynthesis from water and carbon dioxide, using ...
. Lichenized fungal cells can make the photobiont "leak" out the products of photosynthesis, where they can then be absorbed by the fungus.
It appears many, probably the majority, of lichen also live in a symbiotic relationship with an order of
basidiomycete
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ...
yeasts called Cyphobasidiales. The absence of this third partner could explain why growing lichen in the laboratory is difficult. The yeast cells are responsible for the formation of the characteristic cortex of the lichen thallus, and could also be important for its shape.
The lichen combination of alga or cyanobacterium with a fungus has a very different form (morphology), physiology, and biochemistry than the component fungus, alga, or cyanobacterium growing by itself, naturally or in culture. The body (
thallus
Thallus (plural: thalli), from Latinized Greek (), meaning "a green shoot" or "twig", is the vegetative tissue of some organisms in diverse groups such as algae, fungi, some liverworts, lichens, and the Myxogastria. Many of these organisms wer ...
) of most lichens is different from those of either the fungus or alga growing separately. When grown in the laboratory in the absence of its photobiont, a lichen fungus develops as a structureless, undifferentiated mass of fungal filaments (
hyphae
A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium.
Structure
A hypha consists of one or ...
). If combined with its photobiont under appropriate conditions, its characteristic form associated with the photobiont emerges, in the process called
morphogenesis
Morphogenesis (from the Greek ''morphê'' shape and ''genesis'' creation, literally "the generation of form") is the biological process that causes a cell, tissue or organism to develop its shape. It is one of three fundamental aspects of devel ...
. In a few remarkable cases, a single lichen fungus can develop into two very different lichen forms when associating with either a green algal or a cyanobacterial symbiont. Quite naturally, these alternative forms were at first considered to be different species, until they were found growing in a conjoined manner.
Evidence that lichens are examples of successful
symbiosis
Symbiosis (from Greek , , "living together", from , , "together", and , bíōsis, "living") is any type of a close and long-term biological interaction between two different biological organisms, be it mutualistic, commensalistic, or parasit ...
is the fact that lichens can be found in almost every habitat and geographic area on the planet. Two species in two genera of green algae are found in over 35% of all lichens, but can only rarely be found living on their own outside of a lichen.
In a case where one fungal partner simultaneously had two green algae partners that outperform each other in different climates, this might indicate having more than one photosynthetic partner at the same time might enable the lichen to exist in a wider range of habitats and geographic locations.
At least one form of lichen, the North American beard-like lichens, are constituted of not two but three symbiotic partners: an ascomycetous fungus, a photosynthetic alga, and, unexpectedly, a basidiomycetous yeast.
Phycobionts can have a net output of sugars with only water vapor. The thallus must be saturated with liquid water for cyanobionts to photosynthesize.
Algae produce sugars that are absorbed by the fungus by diffusion into special fungal hyphae called
appressoria
An appressorium is a specialized cell typical of many fungal plant pathogens that is used to infect host plants. It is a flattened, hyphal "pressing" organ, from which a minute infection peg grows and enters the host, using turgor pressure capable ...
or
haustoria
In botany and mycology, a haustorium (plural haustoria) is a rootlike structure that grows into or around another structure to absorb water or nutrients. For example, in mistletoe or members of the broomrape family, the structure penetrates t ...
in contact with the wall of the algal cells. The appressoria or haustoria may produce a substance that increases permeability of the algal cell walls, and may penetrate the walls. The algae may contribute up to 80% of their sugar production to the fungus.
Ecology
Lichen associations may be examples of mutualism or
commensalism
Commensalism is a long-term biological interaction (symbiosis) in which members of one species gain benefits while those of the other species neither benefit nor are harmed. This is in contrast with mutualism, in which both organisms benefit fro ...
, but the lichen relationship can be considered
parasitic
Parasitism is a close relationship between species, where one organism, the parasite, lives on or inside another organism, the host, causing it some harm, and is adapted structurally to this way of life. The entomologist E. O. Wilson has c ...
under circumstances where the photosynthetic partner can exist in nature independently of the fungal partner, but not vice versa. Photobiont cells are routinely destroyed in the course of
nutrient
A nutrient is a substance used by an organism to survive, grow, and reproduce. The requirement for dietary nutrient intake applies to animals, plants, fungi, and protists. Nutrients can be incorporated into cells for metabolic purposes or excret ...
exchange. The association continues because reproduction of the photobiont cells matches the rate at which they are destroyed. The
fungus
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from th ...
surrounds the algal cells, often enclosing them within complex fungal tissues unique to lichen associations. In many species the fungus penetrates the algal cell wall, forming penetration pegs (
haustoria
In botany and mycology, a haustorium (plural haustoria) is a rootlike structure that grows into or around another structure to absorb water or nutrients. For example, in mistletoe or members of the broomrape family, the structure penetrates t ...
) similar to those produced by
pathogenic fungi Pathogenic fungi are fungi that cause disease in humans or other organisms. Approximately 300 fungi are known to be pathogenic to humans. Markedly more fungi are known to be pathogenic to plant life than those of the animal kingdom. The study of fu ...
that feed on a host.
Cyanobacteria
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blu ...
in laboratory settings can grow faster when they are alone rather than when they are part of a lichen.
Miniature ecosystem and holobiont theory
Symbiosis in lichens is so well-balanced that lichens have been considered to be relatively self-contained miniature ecosystems in and of themselves.Honegger, R. (1991) ''Fungal evolution: symbiosis and morphogenesis, Symbiosis as a Source of Evolutionary Innovation'', Margulis, L., and Fester, R. (eds). Cambridge, MA, USA: The MIT Press, pp. 319–340. It is thought that lichens may be even more complex symbiotic systems that include non-photosynthetic bacterial communities performing other functions as partners in a
holobiont
A holobiont is an assemblage of a host and the many other species living in or around it, which together form a discrete ecological unit through symbiosis, though there is controversy over this discreteness. The components of a holobiont are in ...
air pollution
Air pollution is the contamination of air due to the presence of substances in the atmosphere that are harmful to the health of humans and other living beings, or cause damage to the climate or to materials. There are many different types ...
,
ozone
Ozone (), or trioxygen, is an inorganic molecule with the chemical formula . It is a pale blue gas with a distinctively pungent smell. It is an allotrope of oxygen that is much less stable than the diatomic allotrope , breaking down in the lo ...
depletion, and metal contamination. Lichens have been used in making
dye
A dye is a colored substance that chemically bonds to the substrate to which it is being applied. This distinguishes dyes from pigments which do not chemically bind to the material they color. Dye is generally applied in an aqueous solution an ...
s,
perfume
Perfume (, ; french: parfum) is a mixture of fragrant essential oils or aroma compounds (fragrances), fixatives and solvents, usually in liquid form, used to give the human body, animals, food, objects, and living-spaces an agreeable scent. Th ...
s, and in
traditional medicine
Traditional medicine (also known as indigenous medicine or folk medicine) comprises medical aspects of traditional knowledge that developed over generations within the folk beliefs of various societies, including indigenous peoples, before the ...
s. A few lichen species are eaten by insects or larger animals, such as reindeer. Lichens are widely used as environmental indicators or bio-indicators. When air is very badly polluted with sulphur dioxide, there may be no lichens present; only some green algae can tolerate those conditions. If the air is clean, then shrubby, hairy and leafy lichens become abundant. A few lichen species can tolerate fairly high levels of pollution, and are commonly found in urban areas, on pavements, walls and tree bark. The most sensitive lichens are shrubby and leafy, while the most tolerant lichens are all crusty in appearance. Since industrialisation, many of the shrubby and leafy lichens such as ''
Ramalina
''Ramalina'' is a genus of greenish fruticose lichens that grow in the form of flattened, strap-like branches. Members of the genus are commonly called strap lichensField Guide to California Lichens, Stephen Sharnoff, Yale University Press, 201 ...
'', ''
Usnea
''Usnea'' is a genus of mostly pale grayish-green fruticose lichens that grow like leafless mini-shrubs or tassels anchored on bark or twigs.Field Guide to California Lichens, Stephen Sharnoff, Yale University Press, 2014, The genus is in the f ...
'' and ''
Lobaria
''Lobaria'' is a genus of foliose lichens, formerly classified in the family Lobariaceae, but now placed in the Peltigeraceae. They are commonly known as "lung wort" or "lungmoss" as their physical shape somewhat resembles a lung, and their ecol ...
'' species have very limited ranges, often being confined to the areas which have the cleanest air.
Lichenicolous fungi
Some fungi can only be found living ''on'' lichens as
obligate {{wiktionary, obligate
As an adjective, obligate means "by necessity" (antonym ''facultative'') and is used mainly in biology in phrases such as:
* Obligate aerobe, an organism that cannot survive without oxygen
* Obligate anaerobe, an organism that ...
parasite
Parasitism is a close relationship between species, where one organism, the parasite, lives on or inside another organism, the host, causing it some harm, and is adapted structurally to this way of life. The entomologist E. O. Wilson has ...
s. These are referred to as
lichenicolous fungi
A lichenicolous fungus is a parasitic fungus that only lives on lichen as the host. A lichenicolous fungus is not the same as the fungus that is the component of the lichen, which is known as a lichenized fungus. They are most commonly specific to ...
, and are a different species from the fungus living inside the lichen; thus they are not considered to be part of the lichen.
Reaction to water
Moisture makes the cortex become more transparent. This way, the algae can conduct photosynthesis when moisture is available, and is protected at other times. When the cortex is more transparent, the algae show more clearly and the lichen looks greener.
Metabolites, metabolite structures and bioactivity
Lichens can show intense antioxidant activity.
Secondary metabolites
Secondary metabolites, also called specialised metabolites, toxins, secondary products, or natural products, are organic compounds produced by any lifeform, e.g. bacteria, fungi, animals, or plants, which are not directly involved in the nor ...
are often deposited as crystals in the
apoplast
Inside a plant, the apoplast can mean the space outside of cell membranes, where material can diffuse freely; that is, the extracellular spaces.
''Apoplast '' can also refer especially to the continuum of cell walls of adjacent cells; fluid and ma ...
. Secondary metabolites are thought to play a role in preference for some substrates over others.
Sometimes lichens contain structures made from fungal
metabolite
In biochemistry, a metabolite is an intermediate or end product of metabolism.
The term is usually used for small molecules. Metabolites have various functions, including fuel, structure, signaling, stimulatory and inhibitory effects on enzymes, c ...
s, for example crustose lichens sometimes have a
polysaccharide
Polysaccharides (), or polycarbohydrates, are the most abundant carbohydrates found in food. They are long chain polymeric carbohydrates composed of monosaccharide units bound together by glycosidic linkages. This carbohydrate can react with wa ...
layer in the cortex.
Growth rate
Lichens often have a regular but very slow growth rate of less than a millimeter per year.
In crustose lichens, the area along the margin is where the most active growth is taking place. Most crustose lichens grow only 1–2 mm in diameter per year.
Life span
Lichens may be long-lived, with some considered to be among the oldest living organisms. Lifespan is difficult to measure because what defines the "same" individual lichen is not precise. Lichens grow by vegetatively breaking off a piece, which may or may not be defined as the "same" lichen, and two lichens can merge, then becoming the "same" lichen. An
Arctic
The Arctic ( or ) is a polar regions of Earth, polar region located at the northernmost part of Earth. The Arctic consists of the Arctic Ocean, adjacent seas, and parts of Canada (Yukon, Northwest Territories, Nunavut), Danish Realm (Greenla ...
species called "map lichen" (''
Rhizocarpon geographicum
''Rhizocarpon geographicum'' (the map lichen) is a species of lichen, which grows on rocks in mountainous areas of low air pollution. Each lichen is a flat patch bordered by a black line of fungal hyphae. These patches grow adjacent to each other ...
'') has been dated at 8,600 years, apparently the world's oldest living organism.
Response to environmental stress
Unlike simple dehydration in plants and animals, lichens may experience a ''complete'' loss of body water in dry periods. Lichens are capable of surviving extremely low levels of
water
Water (chemical formula ) is an inorganic, transparent, tasteless, odorless, and nearly colorless chemical substance, which is the main constituent of Earth's hydrosphere and the fluids of all known living organisms (in which it acts as a ...
content (
poikilohydric
Poikilohydry is the lack of ability (structural or functional mechanism) to maintain and/or regulate water content to achieve homeostasis
In biology, homeostasis (British English, British also homoeostasis) Help:IPA/English, (/hɒmɪə(ʊ)ˈste ...
). They quickly absorb water when it becomes available again, becoming soft and fleshy.
In tests, lichen survived and showed remarkable results on the adaptation capacity of photosynthetic activity within the simulation time of 34 days under Martian conditions in the Mars Simulation Laboratory (MSL) maintained by the
German Aerospace Center
The German Aerospace Center (german: Deutsches Zentrum für Luft- und Raumfahrt e.V., abbreviated DLR, literally ''German Center for Air- and Space-flight'') is the national center for aerospace, energy and transportation research of Germany ...
(DLR).
The
European Space Agency
, owners =
, headquarters = Paris, Île-de-France, France
, coordinates =
, spaceport = Guiana Space Centre
, seal = File:ESA emblem seal.png
, seal_size = 130px
, image = Views in the Main Control Room (1205 ...
has discovered that lichens can survive unprotected in space. In an experiment led by Leopoldo Sancho from the Complutense University of Madrid, two species of lichen—''
Rhizocarpon geographicum
''Rhizocarpon geographicum'' (the map lichen) is a species of lichen, which grows on rocks in mountainous areas of low air pollution. Each lichen is a flat patch bordered by a black line of fungal hyphae. These patches grow adjacent to each other ...
'' and ''
Xanthoria elegans
''Xanthoria elegans'', commonly known as the elegant sunburst lichen, is a lichenized species of fungus in the genus ''Xanthoria'', family Teloschistaceae. Recognized by its bright orange or red pigmentation, this species grows on rocks, often ne ...
''—were sealed in a capsule and launched on a Russian Soyuz rocket 31 May 2005. Once in orbit, the capsules were opened and the lichens were directly exposed to the vacuum of space with its widely fluctuating temperatures and cosmic radiation. After 15 days, the lichens were brought back to earth and were found to be unchanged in their ability to photosynthesize.
Reproduction and dispersal
Vegetative reproduction
Many lichens reproduce asexually, either by a piece breaking off and growing on its own (
vegetative reproduction
Vegetative reproduction (also known as vegetative propagation, vegetative multiplication or cloning) is any form of asexual reproduction occurring in plants in which a new plant grows from a fragment or cutting of the parent plant or spec ...
) or through the dispersal of
diaspore
Diaspore , also known as diasporite, empholite, kayserite, or tanatarite, is an aluminium oxide hydroxide mineral, α-AlO(OH), crystallizing in the orthorhombic system and isomorphous with goethite. It occurs sometimes as flattened crystals, bu ...
s containing a few algal cells surrounded by fungal cells. Because of the relative lack of differentiation in the thallus, the line between diaspore formation and vegetative reproduction is often blurred. Fruticose lichens can easily fragment, and new lichens can grow from the fragment (
vegetative reproduction
Vegetative reproduction (also known as vegetative propagation, vegetative multiplication or cloning) is any form of asexual reproduction occurring in plants in which a new plant grows from a fragment or cutting of the parent plant or spec ...
). Many lichens break up into fragments when they dry, dispersing themselves by wind action, to resume growth when moisture returns. ''Soredia'' (singular: "soredium") are small groups of algal cells surrounded by fungal filaments that form in structures called soralia, from which the soredia can be dispersed by wind. ''Isidia'' (singular: "isidium") are branched, spiny, elongated, outgrowths from the thallus that break off for mechanical dispersal. Lichen propagules (
diaspores
In botany, a diaspore is a plant dispersal unit consisting of a seed or spore plus any additional tissues that assist dispersal. In some seed plants, the diaspore is a seed and fruit together, or a seed and elaiosome. In a few seed plants, the di ...
) typically contain cells from both partners, although the fungal components of so-called "fringe species" rely instead on algal cells dispersed by the "core species".
Sexual reproduction
Structures involved in reproduction often appear as discs, bumps, or squiggly lines on the surface of the thallus. Though it has been argued that sexual reproduction in photobionts is selected against, there is strong evidence that suggests meiotic activities (sexual reproduction) in ''Trebouxia''. Many lichen fungi reproduce sexually like other fungi, producing spores formed by
meiosis
Meiosis (; , since it is a reductional division) is a special type of cell division of germ cells in sexually-reproducing organisms that produces the gametes, such as sperm or egg cells. It involves two rounds of division that ultimately resu ...
and fusion of gametes. Following dispersal, such fungal spores must meet with a compatible algal partner before a functional lichen can form.
Some lichen fungi belong to the phylum
Basidiomycota
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ...
(''basidiolichens'') and produce
mushroom
A mushroom or toadstool is the fleshy, spore-bearing fruiting body of a fungus, typically produced above ground, on soil, or on its food source. ''Toadstool'' generally denotes one poisonous to humans.
The standard for the name "mushroom" is t ...
-like reproductive structures resembling those of their nonlichenized relatives.
Most lichen fungi belong to
Ascomycetes
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defi ...
(''ascolichens''). Among the ascolichens,
spore
In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, f ...
s are produced in spore-producing structures called ''
ascomata
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are mo ...
''. The most common types of ascomata are the ''
apothecium
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are ...
'' (plural: apothecia) and ''
perithecium
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are mo ...
'' (plural: perithecia). Apothecia are usually cups or plate-like discs located on the top surface of the lichen thallus. When apothecia are shaped like squiggly line segments instead of like discs, they are called ''lirellae''. Perithecia are shaped like flasks that are immersed in the lichen thallus tissue, which has a small hole for the spores to escape the flask, and appear like black dots on the lichen surface.
The three most common spore body types are raised discs called ''
apothecia
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are mo ...
'' (singular: apothecium), bottle-like cups with a small hole at the top called ''perithecia'' (singular: perithecium), and ''pycnidia'' (singular: pycnidium), shaped like perithecia but without asci (an
ascus
An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or s ...
is the structure that contains and releases the sexual spores in fungi of the
Ascomycota
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The def ...
).
The apothecium has a layer of exposed spore-producing cells called ''
asci ASCI or Asci may refer to:
* Advertising Standards Council of India
* Asci, the plural of ascus, in fungal anatomy
* Accelerated Strategic Computing Initiative
* American Society for Clinical Investigation
* Argus Sour Crude Index
* Association of ...
'' (singular: ascus), and is usually a different color from the thallus tissue. When the apothecium has an outer margin, the margin is called the ''exciple''. When the exciple has a color similar to colored thallus tissue the apothecium or lichen is called ''lecanorine'', meaning similar to members of the genus ''
Lecanora
''Lecanora'' is a genus of lichen commonly called rim lichens.Field Guide to California Lichens, Stephen Sharnoff, Yale University Press, 2014, Lichens in the genus ''Squamarina'' are also called rim lichens. Members of the genus have roughly ci ...
''. When the exciple is blackened like carbon it is called ''lecideine'' meaning similar to members of the genus ''
Lecidea
''Lecidea'' is a genus of crustose lichens with a carbon black ring or outer margin (exciple) around the fruiting body disc (apothecium), usually (or always) found growing on (saxicolous) or in (endolithic) rock.Field Guide to California Lichens, ...
''. When the margin is pale or colorless it is called ''biatorine''.
A "
podetium
A podetium (plural: podetia) is the upright secondary thallus in ''Cladonia'' lichens. It is a hollow stalk extending from the primary thallus. Podetia can be pointed stalks, club like, cupped, or branched in shape and may or may not contain the a ...
" (plural:
podetia
A podetium (plural: podetia) is the upright secondary thallus in ''Cladonia'' lichens. It is a hollow stalk extending from the primary thallus. Podetia can be pointed stalks, club like, cupped, or branched in shape and may or may not contain the a ...
) is a lichenized stalk-like structure of the fruiting body rising from the thallus, associated with some fungi that produce a fungal
apothecium
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are ...
. Since it is part of the reproductive tissue, podetia are not considered part of the main body (thallus), but may be visually prominent. The podetium may be branched, and sometimes cup-like. They usually bear the fungal
pycnidia
A pycnidium (plural pycnidia) is an asexual fruiting body produced by mitosporic fungi, for instance in the order Sphaeropsidales ( Deuteromycota, Coelomycetes) or order Pleosporales (Ascomycota, Dothideomycetes). It is often spherical or inve ...
or
apothecia
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are mo ...
or both. Many lichens have
apothecia
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are mo ...
that are visible to the naked eye.
Most lichens produce abundant sexual structures. Many species appear to disperse only by sexual spores. For example, the crustose lichens ''Graphis scripta'' and ''Ochrolechia parella'' produce no symbiotic vegetative propagules. Instead, the lichen-forming fungi of these species reproduce sexually by self-fertilization (i.e. they are
homothallic Homothallic refers to the possession, within a single organism, of the resources to reproduce sexually; i.e., having male and female reproductive structures on the same thallus. The opposite sexual functions are performed by different cells of a si ...
). This breeding system may enable successful reproduction in harsh environments.
''Mazaedia'' (singular: mazaedium) are apothecia shaped like a dressmaker's pin in
pin lichen
Lichens are wikt:composite, composite organisms made up of multiple species: a fungus, fungal partner, one or more photosynthetic partners, and sometimes a yeast, basidiomycete yeast. They are regularly grouped by their external appearance – a c ...
s, where the fruiting body is a brown or black mass of loose ascospores enclosed by a cup-shaped exciple, which sits on top of a tiny stalk.
Taxonomy and classification
Lichens are classified by the fungal component. Lichen species are given the same scientific name (
binomial name
In taxonomy, binomial nomenclature ("two-term naming system"), also called nomenclature ("two-name naming system") or binary nomenclature, is a formal system of naming species of living things by giving each a name composed of two parts, bot ...
) as the fungus species in the lichen. Lichens are being integrated into the classification schemes for fungi. The alga bears its own scientific name, which bears no relationship to that of the lichen or fungus. There are about 13,500–17,000 identified lichen species. Nearly 20% of known fungal species are associated with lichens.
"''Lichenized fungus''" may refer to the entire lichen, or to just the fungus. This may cause confusion without context. A particular fungus species may form lichens with different algae species, giving rise to what appear to be different lichen species, but which are still classified (as of 2014) as the same lichen species.
Formerly, some lichen taxonomists placed lichens in their own division, the ''Mycophycophyta'', but this practice is no longer accepted because the components belong to separate lineages. Neither the ascolichens nor the basidiolichens form
monophyletic
In cladistics for a group of organisms, monophyly is the condition of being a clade—that is, a group of taxa composed only of a common ancestor (or more precisely an ancestral population) and all of its lineal descendants. Monophyletic gro ...
lineages in their respective fungal phyla, but they do form several major solely or primarily lichen-forming groups within each phylum. Even more unusual than basidiolichens is the fungus '' Geosiphon pyriforme'', a member of the
Glomeromycota
Glomeromycota (often referred to as glomeromycetes, as they include only one class, Glomeromycetes) are one of eight currently recognized divisions within the kingdom Fungi,
with approximately 230 described species. Members of the Glomeromycot ...
that is unique in that it encloses a cyanobacterial symbiont inside its cells. ''
Geosiphon
''Geosiphon'' is a genus of fungus in the family Geosiphonaceae. The genus is monotypic, containing the single species ''Geosiphon pyriformis'', first described by Kützing in 1849 as ''Botrydium pyriforme''. In 1915, Von Wettstein characterized ...
'' is not usually considered to be a lichen, and its peculiar symbiosis was not recognized for many years. The genus is more closely allied to endomycorrhizal genera. Fungi from
Verrucariales
Verrucariales is an order of ascomycetous fungi within the subclass Chaetothyriomycetidae of the class Eurotiomycetes. Although most of the Verrucariales are lichenised, the family Sarcopyreniaceae consists of 11 species of lichenicolous (liche ...
also form marine lichens with the
brown algae
Brown algae (singular: alga), comprising the class Phaeophyceae, are a large group of multicellular algae, including many seaweeds located in colder waters within the Northern Hemisphere. Brown algae are the major seaweeds of the temperate and po ...
''Petroderma maculiforme'', and have a symbiotic relationship with
seaweed
Seaweed, or macroalgae, refers to thousands of species of macroscopic, multicellular, marine algae. The term includes some types of '' Rhodophyta'' (red), ''Phaeophyta'' (brown) and ''Chlorophyta'' (green) macroalgae. Seaweed species such as ...
Blidingia minima
''Blidingia minima'' is a species of seaweed in the Kornmanniaceae family. It was described by Johann Kylin in 1947.
Description
The species is long by wide and is light green in colour. It fronds are tubular with it cell arrangement being i ...
'', where the algae are the dominant components. The fungi is thought to help the rockweeds to resist desiccation when exposed to air. In addition, lichens can also use
yellow-green algae
Yellow-green algae or the Xanthophyceae (xanthophytes) are an important group of heterokont algae. Most live in fresh water, but some are found in marine and soil habitats. They vary from single-celled flagellates to simple colonial and filamento ...
(''
Heterococcus
''Heterococcus'' is a genus of yellow-green algae
Yellow-green algae or the Xanthophyceae (xanthophytes) are an important group of heterokont algae. Most live in fresh water, but some are found in marine and soil habitats. They vary from singl ...
'') as their symbiotic partner.
Lichens independently emerged from fungi associating with algae and cyanobacteria multiple times throughout history.
Fungi
The fungal component of a lichen is called the ''mycobiont''. The mycobiont may be an
Ascomycete
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defi ...
or
Basidiomycete
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ...
. The associated lichens are called either ascolichens or
basidiolichen
Basidiolichens are lichenized members of the Basidiomycota, a much smaller group of lichens than the far more common ascolichens in the Ascomycota. In arctic, alpine, and temperate forests, the most common basidiolichens are in the agaric genus ...
s, respectively. Living as a
symbiont
Symbiosis (from Greek , , "living together", from , , "together", and , bíōsis, "living") is any type of a close and long-term biological interaction between two different biological organisms, be it mutualistic, commensalistic, or parasit ...
in a lichen appears to be a successful way for a fungus to derive essential nutrients, since about 20% of all fungal species have acquired this mode of life.
Thalli produced by a given fungal symbiont with its differing partners may be similar, and the secondary metabolites identical, indicating that the fungus has the dominant role in determining the morphology of the lichen. But the same mycobiont with different photobionts may also produce very different growth forms. Lichens are known in which there is one fungus associated with two or even three algal species.
Although each lichen thallus generally appears homogeneous, some evidence seems to suggest that the fungal component may consist of more than one genetic individual of that species.
Two or more fungal species can interact to form the same lichen.
The following table lists the
orders
Order, ORDER or Orders may refer to:
* Categorization, the process in which ideas and objects are recognized, differentiated, and understood
* Heterarchy, a system of organization wherein the elements have the potential to be ranked a number of d ...
and
families
Family (from la, familia) is a group of people related either by consanguinity (by recognized birth) or affinity (by marriage or other relationship). The purpose of the family is to maintain the well-being of its members and of society. Ideall ...
of fungi that include lichen-forming species.
Photobionts
The
photosynthetic
Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored in c ...
partner in a lichen is called a ''photobiont''. The photobionts in lichens come from a variety of simple
prokaryotic
A prokaryote () is a Unicellular organism, single-celled organism that lacks a cell nucleus, nucleus and other membrane-bound organelles. The word ''prokaryote'' comes from the Greek language, Greek wikt:πρό#Ancient Greek, πρό (, 'before') a ...
and
eukaryotic
Eukaryotes () are organisms whose cells have a nucleus. All animals, plants, fungi, and many unicellular organisms, are Eukaryotes. They belong to the group of organisms Eukaryota or Eukarya, which is one of the three domains of life. Bacte ...
organisms. In the majority of lichens the photobiont is a green alga (
Chlorophyta
Chlorophyta or Prasinophyta is a taxon of green algae informally called chlorophytes. The name is used in two very different senses, so care is needed to determine the use by a particular author. In older classification systems, it refers to ...
) or a
cyanobacterium
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue ...
. In some lichens both types are present; in such cases, the alga is typically the primary partner, with the cyanobacteria being located in cryptic pockets. Algal photobionts are called ''phycobionts'', while cyanobacterial photobionts are called ''cyanobionts''. According to one source, about 90% of all known lichens have phycobionts, and about 10% have cyanobionts, while another source states that two thirds of lichens have green algae as phycobiont, and about one third have a cyanobiont. Approximately 100 species of photosynthetic partners from 40 genera and five distinct classes (prokaryotic:
Cyanophyceae
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue ...
; eukaryotic:
Trebouxiophyceae
The Trebouxiophyceae are a class of green algae, in the division Chlorophyta. Their circumscription within the green algae is not well established due to the need for more genetic studies at higher levels within the group.
Genera without interv ...
,
Phaeophyceae
Brown algae (singular: alga), comprising the class Phaeophyceae, are a large group of multicellular algae, including many seaweeds located in colder waters within the Northern Hemisphere. Brown algae are the major seaweeds of the temperate and po ...
,
Chlorophyceae
The Chlorophyceae are one of the classes of green algae, distinguished mainly on the basis of ultrastructural morphology. They are usually green due to the dominance of pigments chlorophyll a and chlorophyll b. The chloroplast may be discoid, p ...
) have been found to associate with the lichen-forming fungi.
Common
algal
Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular mic ...
photobionts are from the genera ''
Trebouxia
''Trebouxia'' is a unicellular green alga.Silverside, A. J. (2009). Retrieved from http://www.bioref.lastdragon.org/Chlorophyta/''Trebouxia''.html It is a photosynthetic organism that can exist in almost all habitats found in polar, tropical, and ...
Myrmecia
Myrmecia can refer to:
* ''Myrmecia'' (alga), genus of algae associated with lichens
* ''Myrmecia'' (ant), genus of ants called bulldog ants
* Myrmecia (skin), a kind of deep wart on the human hands or feet
See also
* '' Copromorpha myrmecias'' ...
''. ''Trebouxia'' is the most common genus of green algae in lichens, occurring in about 40% of all lichens. "Trebouxioid" means either a photobiont that is in the genus ''Trebouxia'', or resembles a member of that genus, and is therefore presumably a member of the class
Trebouxiophyceae
The Trebouxiophyceae are a class of green algae, in the division Chlorophyta. Their circumscription within the green algae is not well established due to the need for more genetic studies at higher levels within the group.
Genera without interv ...
. The second most commonly represented green alga genus is '' Trentepohlia''. Overall, about 100 species of eukaryotes are known to occur as photobionts in lichens. All the algae are probably able to exist independently in nature as well as in the lichen.
A "
cyanolichen
Cyanolichens are lichens that apart from the basic fungal component ("mycobiont"), contain cyanobacteria, otherwise known as blue-green algae, as the photosynthesizing component ("photobiont"). Overall, about a third of lichen photobionts are cyan ...
" is a lichen with a
cyanobacterium
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue ...
as its main photosynthetic component (photobiont). Most cyanolichen are also ascolichens, but a few basidiolichen like
Dictyonema
''Dictyonema'' is a genus of mainly tropical basidiolichens in the family Hygrophoraceae.
The ''Dictyonema'' symbiosis
Most lichens are a symbiosis between an ascomycete fungus and a photosynthetic green alga. However, a small percentage of ...
and
Acantholichen
''Acantholichen'' is a fungal genus in the family Hygrophoraceae. The genus was circumscribed by Norwegian lichenologist Per Magnus Jørgensen to contain the type, and at that time, only species, the basidiolichen ''Acantholichen pannarioides'' ...
have cyanobacteria as their partner.
The most commonly occurring cyanobacterium
genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus com ...
is ''
Nostoc
''Nostoc'', also known as star jelly, troll’s butter, spit of moon, fallen star, witch's butter (not to be confused with the fungi commonly known as witches' butter), and witch’s jelly, is the most common genus of cyanobacteria found in vari ...
''. Other common
cyanobacterium
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue ...
photobionts are from ''
Scytonema
''Scytonema'' is a genus of photosynthetic cyanobacteria that contains over 100 species. It grows in filaments that form dark mats. Many species are aquatic and are either free-floating or grow attached to a submerged substrate, while others s ...
''. Many cyanolichens are small and black, and have
limestone
Limestone ( calcium carbonate ) is a type of carbonate sedimentary rock which is the main source of the material lime. It is composed mostly of the minerals calcite and aragonite, which are different crystal forms of . Limestone forms whe ...
as the substrate. Another cyanolichen group, the jelly lichens of the genera ''
Collema
''Collema'' (jelly lichen) is a genus of lichens in the family (biology), family Collemataceae. The photobiont is the cyanobacterium genus ''Nostoc''.Dobson, F.S. (2000) Lichens, an illustrated guide to the British and Irish species. 4th edition. ...
'' or ''
Leptogium
''Leptogium'' is a genus of lichen-forming fungi in the family Collemataceae. It has about 110 species.
Species
*'' Leptogium acadiense''
*'' Leptogium adnatum'' – South America
*''Leptogium andegavense''
*'' Leptogium antarcticum''
*''L ...
'' are gelatinous and live on moist soils. Another group of large and
foliose
Foliose lichen is one of the morphological classes of lichens, which are complex organisms that arise from the symbiotic relationship between fungi and a photosynthetic partner, typically algae. This partnership allows lichen to live in diverse ...
species including ''
Peltigera
''Peltigera'' is a genus of approximately 100 species of foliose lichens in the family Peltigeraceae. Commonly known as the dog or pelt lichens, species of ''Peltigera'' are often terricolous (growing on soil), but can also occur on moss, trees, ...
'', ''
Lobaria
''Lobaria'' is a genus of foliose lichens, formerly classified in the family Lobariaceae, but now placed in the Peltigeraceae. They are commonly known as "lung wort" or "lungmoss" as their physical shape somewhat resembles a lung, and their ecol ...
'', and ''
Degelia
''Degelia'' is a genus of lichen-forming fungi in the family Pannariaceae. The genus is named after Swedish lichenologist Gunnar Degelius.
The genus was circumscribed by Lars Arvidsson and David John Galloway in 1981.
Species
*''Degelia calc ...
'' are grey-blue, especially when dampened or wet. Many of these characterize the Lobarion communities of higher rainfall areas in western Britain, e.g., in the
Celtic rain forest
Celtic Rainforest is a colloquial term which refers to the temperate rainforest of Ireland and Great Britain. These woodlands are also variously referred to as Atlantic rainforest, Upland Oakwoods, Atlantic Oakwoods or Western Oakwoods. Today, the ...
. Strains of cyanobacteria found in various cyanolichens are often closely related to one another. They differ from the most closely related free-living strains.
The lichen association is a close symbiosis. It extends the ecological range of both partners but is not always obligatory for their growth and reproduction in natural environments, since many of the algal symbionts can live independently. A prominent example is the alga '' Trentepohlia'', which forms orange-coloured populations on tree trunks and suitable rock faces. Lichen propagules (
diaspores
In botany, a diaspore is a plant dispersal unit consisting of a seed or spore plus any additional tissues that assist dispersal. In some seed plants, the diaspore is a seed and fruit together, or a seed and elaiosome. In a few seed plants, the di ...
) typically contain cells from both partners, although the fungal components of so-called "fringe species" rely instead on algal cells dispersed by the "core species".
The same cyanobiont species can occur in association with different fungal species as lichen partners. The same phycobiont species can occur in association with different fungal species as lichen partners. More than one phycobiont may be present in a single thallus.
A single lichen may contain several algal
genotype
The genotype of an organism is its complete set of genetic material. Genotype can also be used to refer to the alleles or variants an individual carries in a particular gene or genetic location. The number of alleles an individual can have in a ...
s. These multiple genotypes may better enable response to adaptation to environmental changes, and enable the lichen to inhabit a wider range of environments.
Controversy over classification method and species names
There are about 20,000 known lichen
species
In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate s ...
. But what is meant by "species" is different from what is meant by biological species in plants, animals, or fungi, where being the same species implies that there is a common
ancestral lineage
An evolutionary lineage is a temporal series of populations, organisms, cells, or genes connected by a continuous line of descent from ancestor to descendant.The Oxford English Dictionary defines biological lineage as "a sequence of species each of ...
. Because lichens are combinations of members of two or even three different biological
kingdom
Kingdom commonly refers to:
* A monarchy ruled by a king or queen
* Kingdom (biology), a category in biological taxonomy
Kingdom may also refer to:
Arts and media Television
* ''Kingdom'' (British TV series), a 2007 British television drama s ...
s, these components ''must'' have a ''different'' ancestral lineage from each other. By convention, lichens are still called "species" anyway, and are classified according to the species of their fungus, not the species of the algae or cyanobacteria. Lichens are given the same scientific name (
binomial name
In taxonomy, binomial nomenclature ("two-term naming system"), also called nomenclature ("two-name naming system") or binary nomenclature, is a formal system of naming species of living things by giving each a name composed of two parts, bot ...
) as the fungus in them, which may cause some confusion. The alga bears its own scientific name, which has no relationship to the name of the lichen or fungus.
Depending on context, "lichenized fungus" may refer to the entire lichen, or to the fungus when it is in the lichen, which can be grown in culture in isolation from the algae or cyanobacteria. Some algae and cyanobacteria are found naturally living outside of the lichen. The fungal, algal, or cyanobacterial component of a lichen can be grown by itself in culture. When growing by themselves, the fungus, algae, or cyanobacteria have very different properties than those of the lichen. Lichen properties such as growth form, physiology, and biochemistry, are very different from the combination of the properties of the fungus and the algae or cyanobacteria.
The same fungus growing in combination with different algae or cyanobacteria, can produce lichens that are very different in most properties, meeting non-DNA criteria for being different "species". Historically, these different combinations were classified as different species. When the fungus is identified as being the same using modern DNA methods, these apparently different species get reclassified as the ''same'' species under the current (2014) convention for classification by fungal component. This has led to debate about this classification convention. These apparently different "species" have their own independent evolutionary history.
There is also debate as to the appropriateness of giving the same binomial name to the fungus, and to the lichen that combines that fungus with an alga or cyanobacterium (
synecdoche
Synecdoche ( ) is a type of metonymy: it is a figure of speech in which a term for a part of something is used to refer to the whole (''pars pro toto''), or vice versa (''totum pro parte''). The term comes from Greek .
Examples in common Engl ...
). This is especially the case when combining the same fungus with different algae or cyanobacteria produces dramatically different lichen organisms, which would be considered different species by any measure other than the DNA of the fungal component. If the whole lichen produced by the same fungus growing in association with different algae or cyanobacteria, were to be classified as different "species", the number of "lichen species" would be greater.
Diversity
The largest number of lichenized fungi occur in the
Ascomycota
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The def ...
, with about 40% of species forming such an association. Some of these lichenized fungi occur in orders with nonlichenized fungi that live as
saprotroph
Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi (f ...
Leotiales
The Leotiales are an order of ascomycete fungi. The order contains 2 families (the Bulgariaceae and the Leotiaceae), 11 genera, and 41 species
In biology, a species is the basic unit of classification and a taxonomic rank of an organ ...
,
Dothideales
Dothideales are an order of bitunicate fungi consisting mainly of saprobic or plant parasitic species.
Description
Taxa in this order are characterized by the absence of a hamathecium (defined as hyphae or other tissues between asci) in a loc ...
, and
Pezizales
The Pezizales are an order of the subphylum Pezizomycotina within the phylum Ascomycota. The order contains 16 families, 199 genera, and 1683 species. It contains a number of species of economic importance, such as morels, the black and white tr ...
). Other lichen fungi occur in only five
orders
Order, ORDER or Orders may refer to:
* Categorization, the process in which ideas and objects are recognized, differentiated, and understood
* Heterarchy, a system of organization wherein the elements have the potential to be ranked a number of d ...
in which all members are engaged in this habit (Orders Graphidales,
Gyalectales
''Gyalectales'' is an order of lichen-forming fungi in the class Lecanoromycetes. It contains 5 families, 15 genera and about 550 species.
Taxonomy
The Gyalectales were introduced in a 1974 publication by Aino Henssen and Martin Jahns, but ...
,
Peltigerales
Peltigerales is an order of lichen-forming fungi belonging to the class Lecanoromycetes in the division Ascomycota. The taxonomy of the group has seen numerous changes; it was formerly often treated as a suborder of the order Lecanorales. It con ...
,
Pertusariales
The Pertusariales are an order of fungi in the class Lecanoromycetes. It contains the following families: Agyriaceae
The Agyriaceae are a family of lichenized fungi in the order Pertusariales. It contains two genera: ''Agyrium
''Agyri ...
, and
Teloschistales
The Teloschistales are an order of mostly lichen-forming fungi belonging to the class Lecanoromycetes in the division Ascomycota. According to one 2008 estimate, the order contains 5 families, 66 genera, and 1954 species. The predominant photobi ...
). Overall, about 98% of lichens have an ascomycetous mycobiont. Next to the Ascomycota, the largest number of lichenized fungi occur in the unassigned
fungi imperfecti
The fungi imperfecti or imperfect fungi, are fungi which do not fit into the commonly established taxonomic classifications of fungi that are based on biological species concepts or morphological characteristics of sexual structures because thei ...
, a catch-all category for fungi whose sexual form of reproduction has never been observed. Comparatively few
basidiomycetes
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ...
are lichenized, but these include
agarics
An agaric () is a type of fungus fruiting body characterized by the presence of a pileus (cap) that is clearly differentiated from the stipe (stalk), with lamellae (gills) on the underside of the pileus. In the UK, agarics are called "mushrooms ...
, such as species of ''
Lichenomphalia
''Lichenomphalia'' is both a basidiolichen and an agaric genus. Most of the species have inconspicuous lichenized thalli that consist of scattered, small, loose, nearly microscopic green balls or foliose small flakes containing single-celled gree ...
'',
clavarioid fungi
The clavarioid fungi are a group of fungi in the ''Basidiomycota'' typically having erect, simple or branched basidiocarps (fruit bodies) that are formed on the ground, on decaying vegetation, or on dead wood. They are colloquially called club fun ...
, such as species of ''
Multiclavula
''Multiclavula'' is a genus of basidiolichens in the family Hydnaceae. The widespread genus contains 14 species.Reschke, K., Lotz-Winter, H., Fischer, C.W., Hofmann, T.A., Piepenbring, M., 2021. New and interesting species of Agaricomycetes from ...
'', and
corticioid fungi
The corticioid fungi are a group of fungi in the Basidiomycota typically having effused, smooth basidiocarps (fruit bodies) that are formed on the undersides of dead tree trunks or branches. They are sometimes colloquially called crust fungi or pa ...
, such as species of ''
Dictyonema
''Dictyonema'' is a genus of mainly tropical basidiolichens in the family Hygrophoraceae.
The ''Dictyonema'' symbiosis
Most lichens are a symbiosis between an ascomycete fungus and a photosynthetic green alga. However, a small percentage of ...
''.
Identification methods
Lichen identification uses growth form, microscopy and reactions to chemical tests.
The outcome of the "Pd test" is called "Pd", which is also used as an abbreviation for the chemical used in the test,
para-phenylenediamine
''p''-Phenylenediamine (PPD) is an organic compound with the formula C6H4(NH2)2. This derivative of aniline is a white solid, but samples can darken due to air oxidation. It is mainly used as a component of engineering polymers and composites lik ...
. If putting a drop on a lichen turns an area bright yellow to orange, this helps identify it as belonging to either the genus ''
Cladonia
''Cladonia'' is a genus of moss-like lichens in the family Cladoniaceae. They are the primary food source for reindeer/caribou. ''Cladonia'' species are of economic importance to reindeer-herders, such as the Sami in Scandinavia or the Nenets ...
'' or ''
Lecanora
''Lecanora'' is a genus of lichen commonly called rim lichens.Field Guide to California Lichens, Stephen Sharnoff, Yale University Press, 2014, Lichens in the genus ''Squamarina'' are also called rim lichens. Members of the genus have roughly ci ...
''.
Evolution and paleontology
The fossil record for lichens is poor."Lichens: Fossil Record" , University of California Museum of Paleontology. The extreme habitats that lichens dominate, such as tundra, mountains, and deserts, are not ordinarily conducive to producing fossils. There are fossilized lichens embedded in amber. The fossilized ''Anzia'' is found in pieces of amber in northern Europe and dates back approximately 40 million years. Lichen fragments are also found in fossil leaf beds, such as ''
Lobaria
''Lobaria'' is a genus of foliose lichens, formerly classified in the family Lobariaceae, but now placed in the Peltigeraceae. They are commonly known as "lung wort" or "lungmoss" as their physical shape somewhat resembles a lung, and their ecol ...
'' from Trinity County in northern California, USA, dating back to the early to middle
Miocene
The Miocene ( ) is the first geological epoch of the Neogene Period and extends from about (Ma). The Miocene was named by Scottish geologist Charles Lyell; the name comes from the Greek words (', "less") and (', "new") and means "less recen ...
.
The oldest fossil lichen in which both symbiotic partners have been recovered is ''
Winfrenatia
''Winfrenatia'' is a genus that contains the oldest-known terrestrial lichen, occurring in fossils preserved in the lower Devonian Rhynie chert. The genus contains the single species ''Winfrenatia reticulata'', named for the texture of its sur ...
'', an early zygomycetous (
Glomeromycota
Glomeromycota (often referred to as glomeromycetes, as they include only one class, Glomeromycetes) are one of eight currently recognized divisions within the kingdom Fungi,
with approximately 230 described species. Members of the Glomeromycot ...
n) lichen symbiosis that may have involved controlled parasitism, is permineralized in the Rhynie Chert of Scotland, dating from early Devonian, Early Devonian, about 400 million years ago. The slightly older fossil ''Spongiophyton'' has also been interpreted as a lichen on morphological and isotopic grounds, although the isotopic basis is decidedly shaky. It has been demonstrated that Silurian-Devonian fossils ''Nematothallus'' and ''Prototaxites'' were lichenized. Thus lichenized
Ascomycota
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The def ...
and
Basidiomycota
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ...
were a component of Llandovery epoch, Early Silurian-Devonian terrestrial ecosystems. Newer research suggests that lichen evolved after the evolution of land plants.
The ancestral ecological state of both
Ascomycota
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The def ...
and
Basidiomycota
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ...
was probably saprobe, saprobism, and independent lichenization events may have occurred multiple times. In 1995, Gargas and colleagues proposed that there were at least five independent origins of lichenization; three in the basidiomycetes and at least two in the Ascomycetes. Lutzoni et al. (2001) suggest lichenization probably evolved earlier and was followed by multiple independent losses. Some non-lichen-forming fungi may have secondarily lost the ability to form a lichen association. As a result, lichenization has been viewed as a highly successful nutritional strategy.
Lichenized
Glomeromycota
Glomeromycota (often referred to as glomeromycetes, as they include only one class, Glomeromycetes) are one of eight currently recognized divisions within the kingdom Fungi,
with approximately 230 described species. Members of the Glomeromycot ...
may extend well back into the Precambrian. Lichen-like fossils consisting of coccoid cells (
cyanobacteria
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blu ...
?) and thin filaments (mucoromycotinan
Glomeromycota
Glomeromycota (often referred to as glomeromycetes, as they include only one class, Glomeromycetes) are one of eight currently recognized divisions within the kingdom Fungi,
with approximately 230 described species. Members of the Glomeromycot ...
?) are permineralized in marine phosphorite of the Doushantuo Formation in southern China. These fossils are thought to be 551 to 635 million years old or Ediacaran. Ediacaran acritarchs also have many similarities with
Glomeromycota
Glomeromycota (often referred to as glomeromycetes, as they include only one class, Glomeromycetes) are one of eight currently recognized divisions within the kingdom Fungi,
with approximately 230 described species. Members of the Glomeromycot ...
n vesicles and spores. It has also been claimed that Ediacaran biota, Ediacaran fossils including ''Dickinsonia'', were lichens, although this claim is controversial. Endosymbiotic
Glomeromycota
Glomeromycota (often referred to as glomeromycetes, as they include only one class, Glomeromycetes) are one of eight currently recognized divisions within the kingdom Fungi,
with approximately 230 described species. Members of the Glomeromycot ...
comparable with living ''
Geosiphon
''Geosiphon'' is a genus of fungus in the family Geosiphonaceae. The genus is monotypic, containing the single species ''Geosiphon pyriformis'', first described by Kützing in 1849 as ''Botrydium pyriforme''. In 1915, Von Wettstein characterized ...
'' may extend back into the Proterozoic in the form of 1500 million year old ''Horodyskia'' and 2200 million year old ''Diskagma''. Discovery of these fossils suggest that fungi developed symbiotic partnerships with photoautotrophs long before the evolution of vascular plants, though the Ediacaran lichen hypothesis is largely rejected due to an inappropriate definition of lichens based on taphonomy and substrate ecology. However, a 2019 study by the same scientist who rejected the Ediacaran lichen hypothesis, Nelsen, used new time-calibrated phylogenies to conclude that there is no evidence of lichen before the existence of vascular plants.
Lecanoromycetes, one of the most common classes of lichen-forming fungi, diverged from its ancestor, which may have also been lichen forming, around 258 million years ago, during the late Paleozoic period. However, the closely related clade Euritiomycetes appears to have become lichen-forming only 52 million years ago, during the early Cenozoic period.
Ecology and interactions with environment
Substrates and habitats
Lichens cover about 7% of the planet's surface and grow on and in a wide range of substrates and habitats, including some of the most extreme conditions on earth. They are abundant growing on bark, leaves, and hanging from
epiphyte
An epiphyte is an organism that grows on the surface of a plant and derives its moisture and nutrients from the air, rain, water (in marine environments) or from debris accumulating around it. The plants on which epiphytes grow are called phoroph ...
branches in rain forests and in
temperate woodland
A woodland () is, in the broad sense, land covered with trees, or in a narrow sense, synonymous with wood (or in the U.S., the ''plurale tantum'' woods), a low-density forest forming open habitats with plenty of sunlight and limited shade (see ...
. They grow on bare rock, walls, gravestones, roofs, and exposed soil surfaces. They can survive in some of the most extreme environments on Earth:
arctic tundra
In physical geography, tundra () is a type of biome where tree growth is hindered by frigid temperatures and short growing seasons. The term ''tundra'' comes through Russian (') from the Kildin Sámi word (') meaning "uplands", "treeless moun ...
, hot dry
desert
A desert is a barren area of landscape where little precipitation occurs and, consequently, living conditions are hostile for plant and animal life. The lack of vegetation exposes the unprotected surface of the ground to denudation. About on ...
s, rocky coasts, and toxic slag heaps. They can live inside solid rock, growing between the grains, and in the soil as part of a
biological soil crust
Biological soil crusts are communities of living organisms on the soil surface in arid and semi-arid ecosystems. They are found throughout the world with varying species composition and cover depending on topography, soil characteristics, climate, ...
in arid habitats such as deserts. Some lichens do not grow on anything, living out their lives blowing about the environment.
When growing on mineral surfaces, some lichens slowly decompose their substrate by chemically degrading and physically disrupting the minerals, contributing to the process of weathering by which rocks are gradually turned into soil. While this contribution to weathering is usually benign, it can cause problems for artificial stone structures. For example, there is an ongoing lichen growth problem on Mount Rushmore National Memorial that requires the employment of mountain-climbing conservators to clean the monument.
Lichens are not parasites on the plants they grow on, but only use them as a substrate. The fungi of some lichen species may "take over" the algae of other lichen species. Lichens make their own food from their photosynthetic parts and by absorbing minerals from the environment. Lichens growing on leaves may have the appearance of being parasites on the leaves, but they are not. Some lichens in ''Diploschistes'' parasitise other lichens. ''Diploschistes muscorum'' starts its development in the tissue of a host ''Cladonia'' species.
In the arctic tundra, lichens, together with mosses and liverworts, make up the majority of the ground cover, which helps insulate the ground and may provide forage for grazing animals. An example is "Reindeer moss", which is a lichen, not a moss.
There are only two species of known permanently submerged lichens; ''Hydrothyria venosa'' is found in fresh water environments, and ''Verrucaria serpuloides'' is found in marine environments.
A crustose lichen that grows on rock is called a ''saxicolous lichen''.''Mosses Lichens & Ferns of Northwest North America'', Dale H. Vitt, Janet E. Marsh, Robin B. Bovey, Lone Pine Publishing Company, Crustose lichens that grow on the rock are epilithic, and those that grow immersed inside rock, growing between the crystals with only their fruiting bodies exposed to the air, are called ''
endolithic lichen An endolithic lichen is a crustose
Crustose is a habit of some types of algae and lichens in which the organism grows tightly appressed to a substrate, forming a biological layer. ''Crustose'' adheres very closely to the substrates at all points. ...
s''. A crustose lichen that grows on bark is called a ''corticolous lichen''. A lichen that grows on wood from which the bark has been stripped is called a ''lignicolous lichen''. Lichens that grow immersed inside plant tissues are called ''endophloidic lichens'' or ''endophloidal lichens''. Lichens that use leaves as substrates, whether the leaf is still on the tree or on the ground, are called ''Epiphyllous lichen, epiphyllous'' or ''foliicolous lichen, foliicolous''. A ''terricolous lichen'' grows on the soil as a substrate. Many squamulous lichens are terricolous. ''Umbilicate lichens'' are foliose lichens that are attached to the substrate at only one point. A ''vagrant lichen'' is not attached to a substrate at all, and lives its life being blown around by the wind.
Lichens and soils
In addition to distinct physical mechanisms by which lichens break down raw stone, recent studies indicate lichens attack stone chemically, entering newly chelated minerals into the ecology.
The lichen exudates, which have powerful chelating capacity, the widespread occurrence of mineral neoformation, particularly metal oxalates, together with the characteristics of weathered substrates, all confirm the significance of lichens as chemical weathering agents.
Over time, this activity creates new fertile soil from lifeless stone.
Lichens may be Lichens and nitrogen cycling, important in contributing nitrogen to soils in some deserts through being eaten, along with their rock substrate, by snails, which then defecate, putting the nitrogen into the soils. Lichens help bind and stabilize soil sand in dunes. In deserts and semi-arid areas, lichens are part of extensive, living
biological soil crust
Biological soil crusts are communities of living organisms on the soil surface in arid and semi-arid ecosystems. They are found throughout the world with varying species composition and cover depending on topography, soil characteristics, climate, ...
s, essential for maintaining the soil structure. Lichens have a long fossil record in soils dating back 2.2 billion years.
Ecological interactions
Lichens are pioneer species, among the first living things to grow on bare rock or areas denuded of life by a disaster. Lichens may have to compete with plants for access to sunlight, but because of their small size and slow growth, they thrive in places where higher plants have difficulty growing. Lichens are often the ecological succession, first to settle in places lacking soil, constituting the sole vegetation in some extreme environments such as those found at high mountain elevations and at high latitudes. Some survive in the tough conditions of deserts, and others on frozen soil of the Arctic regions.
A major ecophysiological advantage of lichens is that they are poikilohydry, poikilohydric (''poikilo''- variable, ''hydric''- relating to water), meaning that though they have little control over the status of their hydration, they can tolerate irregular and extended periods of severe desiccation. Like some
moss
Mosses are small, non-vascular flowerless plants in the taxonomic division Bryophyta (, ) '' sensu stricto''. Bryophyta (''sensu lato'', Schimp. 1879) may also refer to the parent group bryophytes, which comprise liverworts, mosses, and hor ...
es, Marchantiophyta, liverworts, ferns and a few resurrection plants, upon desiccation, lichens enter a metabolic suspension or stasis (known as cryptobiosis) in which the cells of the lichen symbionts are dehydrated to a degree that halts most biochemical activity. In this cryptobiotic state, lichens can survive wider extremes of temperature, radiation and drought in the harsh environments they often inhabit.
Lichens do not have roots and do not need to tap continuous reservoirs of water like most higher plants, thus they can grow in locations impossible for most plants, such as bare rock, sterile soil or sand, and various artificial structures such as walls, roofs, and monuments. Many lichens also grow as
epiphyte
An epiphyte is an organism that grows on the surface of a plant and derives its moisture and nutrients from the air, rain, water (in marine environments) or from debris accumulating around it. The plants on which epiphytes grow are called phoroph ...
s (''epi''- on the surface, ''phyte''- plant) on plants, particularly on the trunks and branches of trees. When growing on plants, lichens are not
parasite
Parasitism is a close relationship between species, where one organism, the parasite, lives on or inside another organism, the host, causing it some harm, and is adapted structurally to this way of life. The entomologist E. O. Wilson has ...
s; they do not consume any part of the plant nor poison it. Lichens produce allelopathy, allelopathic chemicals that inhibit the growth of mosses. Some ground-dwelling lichens, such as members of the subgenus ''Cladoniaceae, Cladina'' (reindeer lichens), produce allelopathic chemicals that leach into the soil and inhibit the germination of seeds, spruce and other plants. Stability (that is, longevity) of their substrate is a major factor of lichen habitats. Most lichens grow on stable rock surfaces or the bark of old trees, but many others grow on soil and sand. In these latter cases, lichens are often an important part of soil stabilization; indeed, in some desert ecosystems, vascular plant, vascular (higher) plant seeds cannot become established except in places where lichen crusts stabilize the sand and help retain water.
Lichens may be eaten by some animals, such as reindeer, living in arctic regions. The larvae of a number of Lepidoptera species feed exclusively on lichens. These include common footman and marbled beauty. They are very low in protein and high in carbohydrates, making them unsuitable for some animals. The Northern flying squirrel uses it for nesting, food and winter water.
Effects of air pollution
If lichens are exposed to air pollutants at all times, without any deciduous parts, they are unable to avoid the accumulation of pollutants. Also lacking stomata and a plant cuticle, cuticle, lichens may absorb aerosols and gases over the entire thallus surface from which they may readily diffusion, diffuse to the photobiont layer. Because lichens do not possess roots, their primary source of most chemical element, elements is the air, and therefore elemental levels in lichens often reflect the accumulated composition of ambient air. The processes by which atmospheric deposition occurs include fog and dew, gaseous absorption, and dry deposition. Consequently, many environmental studies with lichens emphasize their feasibility as effective bioindicator, biomonitors of atmospheric quality.
Not all lichens are equally sensitive to air pollution, air pollutants, so different lichen species show different levels of sensitivity to specific atmospheric pollutants. The sensitivity of a lichen to air pollution is directly related to the energy needs of the mycobiont, so that the stronger the dependency of the mycobiont on the photobiont, the more sensitive the lichen is to air pollution. Upon exposure to air pollution, the photobiont may use metabolic energy for repair of its cellular structures that would otherwise be used for maintenance of its photosynthetic activity, therefore leaving less metabolic energy available for the mycobiont. The alteration of the balance between the photobiont and mycobiont can lead to the breakdown of the symbiotic association. Therefore, lichen decline may result not only from the accumulation of toxic substances, but also from altered nutrient supplies that favor one symbiont over the other.
This interaction between lichens and air pollution has been used as a means of monitoring air quality since 1859, with more systematic methods developed by William Nylander (botanist), William Nylander in 1866.
Human use
Food
Lichens are eaten by many different cultures across the world. Although some lichens are only eaten in times of famine, others are a staple food or even a delicacy. Two obstacles are often encountered when eating lichens: lichen
polysaccharide
Polysaccharides (), or polycarbohydrates, are the most abundant carbohydrates found in food. They are long chain polymeric carbohydrates composed of monosaccharide units bound together by glycosidic linkages. This carbohydrate can react with wa ...
s are generally indigestible to humans, and lichens usually contain mildly toxic secondary compounds that should be removed before eating. Very few lichens are poisonous, but those high in vulpinic acid or
usnic acid
Usnic acid is a naturally occurring dibenzofuran derivative found in several lichen species with the formula C18H16O7. It was first isolated by German scientist W. Knop in 1844 and first synthesized between 1933-1937 by Curd and Robertson. Usnic a ...
are toxic. Most poisonous lichens are yellow.
In the past,
Iceland moss
''Cetraria islandica'', also known as true Iceland lichen or Iceland moss, is an Arctic-alpine lichen whose erect or upright, leaflike habit gives it the appearance of a moss, where its name likely comes from.
Description
It is often of a pale ...
(''Cetraria islandica'') was an important source of food for humans in northern Europe, and was cooked as a bread, porridge, pudding, soup, or salad. ''Bryoria fremontii'' (edible horsehair lichen) was an important food in parts of North America, where it was usually Pit barbecue, pitcooked. Northern peoples in North America and Siberia traditionally eat the partially digested Cladonia rangiferina, reindeer lichen (''Cladina'' spp.) after they remove it from the rumen of caribou or reindeer that have been killed. Rock tripe (''Umbilicaria'' spp. and ''Lasalia'' spp.) is a lichen that has frequently been used as an emergency food in North America, and one species, ''Umbilicaria esculenta'', (''iwatake'' in Japanese) is used in a variety of traditional Korean and Japanese foods.
Lichenometry
Lichenometry is a technique used to determine the age of exposed rock surfaces based on the size of lichen thalli. Introduced by Beschel in the 1950s, the technique has found many applications. it is used in archaeology, palaeontology, and geomorphology. It uses the presumed regular but slow rate of lichen growth to determine the Surface exposure dating, age of exposed rock. Measuring the diameter (or other size measurement) of the largest lichen of a species on a rock surface indicates the length of time since the rock surface was first exposed. Lichen can be preserved on old rock faces for up to 10,000 years, providing the maximum age limit of the technique, though it is most accurate (within 10% error) when applied to surfaces that have been exposed for less than 1,000 years. Lichenometry is especially useful for dating surfaces less than 500 years old, as radiocarbon dating techniques are less accurate over this period. The lichens most commonly used for lichenometry are those of the genera ''Rhizocarpon'' (e.g. the species ''
Rhizocarpon geographicum
''Rhizocarpon geographicum'' (the map lichen) is a species of lichen, which grows on rocks in mountainous areas of low air pollution. Each lichen is a flat patch bordered by a black line of fungal hyphae. These patches grow adjacent to each other ...
'', map lichen) and ''Xanthoria''.
Biodegradation
Lichens have been shown to degrade polyester resins, as can be seen in archaeological sites in the Roman city of Baelo Claudia in Spain. Lichens can accumulate several environmental pollutants such as lead, copper, and radionuclides. Some species of lichen, such as ''Parmelia sulcata'' (called a hammered shield lichen, among other names) and ''Lobaria pulmonaria'' (lung lichen), and many in the Cladonia, ''Cladonia'' genus, have been shown to produce serine proteases capable of the degradation of pathogenic forms of prion protein (PrP), which may be useful in treating contaminated environmental reservoirs.
Dyes
Many lichens produce secondary compounds, including Biological pigment, pigments that reduce harmful amounts of sunlight and powerful toxins that deter herbivores or kill bacteria. These compounds are very useful for lichen identification, and have had economic importance as
dye
A dye is a colored substance that chemically bonds to the substrate to which it is being applied. This distinguishes dyes from pigments which do not chemically bind to the material they color. Dye is generally applied in an aqueous solution an ...
s such as cudbear or primitive antibiotics.
A pH indicator (which can indicate acidic or basic substances) called litmus is a dye extracted from the lichen ''Roccella tinctoria'' ("dyer's weed") by boiling. It gives its name to the well-known Litmus test (chemistry), litmus test.
Traditional dyes of the Scottish Highlands for Harris tweed and other traditional cloths were made from lichens, including the orange ''Xanthoria parietina'' ("common orange lichen") and the grey foliaceous ''Parmelia saxatilis'' common on rocks and known colloquially as "crottle".
There are reports dating almost 2,000 years old of lichens being used to make purple and red dyes. Of great historical and commercial significance are lichens belonging to the family ''Roccellaceae'', commonly called orchella weed or orchil. Orcein and other lichen dyes have largely been replaced by Dye#Natural and synthetic dyes, synthetic versions.
Traditional medicine and research
Historically, in
traditional medicine
Traditional medicine (also known as indigenous medicine or folk medicine) comprises medical aspects of traditional knowledge that developed over generations within the folk beliefs of various societies, including indigenous peoples, before the ...
of Europe, ''Lobaria pulmonaria'' was collected in large quantities as "lungwort", due to its lung-like appearance (the "doctrine of signatures" suggesting that herbs can treat body parts that they physically resemble). Similarly, ''Peltigera leucophlebia'' ("ruffled freckled pelt") was used as a supposed cure for candidiasis, thrush, due to the resemblance of its cephalodia to the appearance of the disease.
Lichens produce
metabolite
In biochemistry, a metabolite is an intermediate or end product of metabolism.
The term is usually used for small molecules. Metabolites have various functions, including fuel, structure, signaling, stimulatory and inhibitory effects on enzymes, c ...
s being researched for their potential therapeutic or diagnostic value. Some metabolites produced by lichens are structurally and functionally similar to broad-spectrum antibiotics while few are associated respectively to antiseptic similarities.Morton, E.; Winters, J. and Smith, L. (2010) "An Analysis of Antiseptic and Antibiotic Properties of Variously Treated Mosses and Lichens" . University of Michigan Biological Station Usnic acid is the most commonly studied metabolite produced by lichens. It is also under research as a Bactericide, bactericidal agent against ''Escherichia coli'' and ''Staphylococcus aureus''.
Aesthetic appeal
Colonies of lichens may be spectacular in appearance, dominating the surface of the visual landscape as part of the aesthetic appeal to visitors of
Yosemite National Park
Yosemite National Park ( ) is an American national park in California, surrounded on the southeast by Sierra National Forest and on the northwest by Stanislaus National Forest. The park is managed by the National Park Service and covers an ar ...
, Sequoia National Park, and the Bay of Fires. Caloplaca, Orange and Xanthoria, yellow lichens add to the ambience of desert trees, tundras, and rocky seashores. Intricate webs of lichens Usnea, hanging from tree branches add a mysterious aspect to forests. Fruticose lichens are used in model railroading and other modeling hobbies as a material for making miniature trees and shrubs.
In literature
In early Midrashic literature, the Hebrew word "''vayilafeth''" in Book of Ruth, Ruth 3:8 is explained as referring to Ruth (biblical figure), Ruth entwining herself around Boaz like lichen. The 10th century Arab physician, Al-Tamimi, the physician, Al-Tamimi, mentions lichens dissolved in vinegar and rose water being used in his day for the treatment of skin diseases and rashes.
The plot of John Wyndham's science fiction novel ''Trouble with Lichen'' revolves around an anti-aging chemical extracted from a lichen.
History
Although lichens had been recognized as organisms for quite some time, it was not until 1867, when Swiss botanist Simon Schwendener proposed his dual theory of lichens, that lichens are a combination of fungi with algae or cyanobacteria, whereby the true nature of the lichen association began to emerge. Schwendener's hypothesis, which at the time lacked experimental evidence, arose from his extensive analysis of the anatomy and development in lichens, algae, and fungi using a light microscopy, light microscope. Many of the leading lichenologists at the time, such as James Mascall Morrison Crombie, James Crombie and William Nylander (botanist), Nylander, rejected Schwendener's hypothesis because the common consensus was that all living organisms were autonomous.
Other prominent biologists, such as Heinrich Anton de Bary, Albert Bernhard Frank, Beatrix Potter, Melchior Treub and Hermann Hellriegel were not so quick to reject Schwendener's ideas and the concept soon spread into other areas of study, such as microbial, plant, animal and human pathogens. When the complex relationships between pathogenic microorganisms and their hosts were finally identified, Schwendener's hypothesis began to gain popularity. Further experimental proof of the dual nature of lichens was obtained when Eugen Thomas published his results in 1939 on the first successful re-synthesis experiment.
In the 2010s, a new facet of the fungi-algae partnership was discovered. Toby Spribille and colleagues found that many types of lichen that were long thought to be ascomycota, ascomycete-algae pairs were actually ascomycete-basidiomycota, basidiomycete-algae trios.
Gallery
Lobaria pulmonaria 01.JPG, ''Lobaria pulmonaria'', tree lungwort, lung lichen, lung moss; Upper Bavaria, Germany
Cladonia macilenta 9497.JPG, ''Cladonia macilenta'' var. ''bacillaris'' 'Lipstick Cladonia'
Usnea australis.jpg, ''
Usnea
''Usnea'' is a genus of mostly pale grayish-green fruticose lichens that grow like leafless mini-shrubs or tassels anchored on bark or twigs.Field Guide to California Lichens, Stephen Sharnoff, Yale University Press, 2014, The genus is in the f ...
australis'', a fruticose form, growing on a tree branch
Kananakislichen.jpg, ''Hypogymnia'' cf. ''tubulosa'' with ''Bryoria'' sp. and ''Tuckermannopsis'' sp. in the Canadian Rockies
Fruticose lichen branches blackpine lake.jpg, ''Letharia'' sp. with ''Bryoria'' sp. on pine branches near Blackpine Lake, Washington State
Lettucelichen.jpg, ''Lobaria oregana'', commonly called 'Lettuce lichen', in the Hoh Rainforest, Washington State
Epiphytic lichen.jpg, A lichen growing on a rock in a Brazilian cloud forest
Lichen squamulose.jpg, ''Xanthoparmelia'' cf. ''lavicola,'' a foliose lichen, on basalt.
Rhizocarpon geographicum01.jpg, Map lichen (''
Rhizocarpon geographicum
''Rhizocarpon geographicum'' (the map lichen) is a species of lichen, which grows on rocks in mountainous areas of low air pollution. Each lichen is a flat patch bordered by a black line of fungal hyphae. These patches grow adjacent to each other ...
'') on rock
LogLichen.jpg, ''Physcia millegrana'' (a foliose lichen), with an unlichenized polypore fungus (bottom right), on a fallen log.
caribou moss.jpg, Reindeer moss (''Cladonia rangiferina'')
Lichenlimestone.JPG, Crustose lichens on limestone in Alta Murgia-Southern Italy
Plants flowers ice rocks lichens 209.jpg, ''Cladonia'' cf. ''cristatella,'' a lichen commonly referred to as 'British Soldiers'. Notice the red tips.
N2 Lichen.jpg, A crusty crustose lichen on a wall
Lichen on Lilac bush.JPG, Lichen on a lilac bush
Plants flowers ice rocks lichens 230.jpg, Foliose lichens on rock growing outward and dying in the center. These lichens are at least several decades old.
Reddish-colored lichen on volcanic rock.jpg, ''Xanthoria'' sp. lichen on volcanic rock in Craters of the Moon National Monument (Idaho, USA)
Lichen on the riverside.jpg, ''Lecanora'' cf. ''muralis'' lichen on the banks of the Bega canal in Timișoara, Romania
Lichen growing on concrete dust (2010 04 08).jpg, Microscopic view of lichen growing on a piece of concrete dust.
See also
* Lichenology
* Lichens and nitrogen cycling
* Outline of lichens
* Symbiosis in lichens