JoAnne Stubbe
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JoAnne Stubbe is an American chemist best known for her work on ribonucleotide reductases, for which she was awarded the
National Medal of Science The National Medal of Science is an honor bestowed by the President of the United States to individuals in science and engineering who have made important contributions to the advancement of knowledge in the fields of behavioral and social scienc ...
in 2009. In 2017, she retired as a Professor of Chemistry and Biology at the
Massachusetts Institute of Technology The Massachusetts Institute of Technology (MIT) is a private land-grant research university in Cambridge, Massachusetts. Established in 1861, MIT has played a key role in the development of modern technology and science, and is one of the ...
.


Career and education

In 1946, Stubbe was born in Champaign, Illinois. In 1968, Stubbe received a BS degree in
chemistry Chemistry is the science, scientific study of the properties and behavior of matter. It is a natural science that covers the Chemical element, elements that make up matter to the chemical compound, compounds made of atoms, molecules and ions ...
from the
University of Pennsylvania The University of Pennsylvania (also known as Penn or UPenn) is a private research university in Philadelphia. It is the fourth-oldest institution of higher education in the United States and is ranked among the highest-regarded universitie ...
, and worked as an undergraduate in the laboratory of Professor Edward R. Thornton. After she received her PhD degree in
organic chemistry Organic chemistry is a subdiscipline within chemistry involving the scientific study of the structure, properties, and reactions of organic compounds and organic materials, i.e., matter in its various forms that contain carbon atoms.Clayden, J.; ...
under the guidance of Professor George Kenyon from the
University of California, Berkeley The University of California, Berkeley (UC Berkeley, Berkeley, Cal, or California) is a public land-grant research university in Berkeley, California. Established in 1868 as the University of California, it is the state's first land-grant u ...
in 1971, she did a very brief stint (1971-1972) as a postdoc at UCLA, where she worked on synthesizing LSD from tryptophan with Julius Rebek. Then, Stubbe taught at
Williams College Williams College is a Private college, private liberal arts colleges in the United States, liberal arts college in Williamstown, Massachusetts. It was established as a men's college in 1793 with funds from the estate of Ephraim Williams, a col ...
(1972-1977) discovered she didn't want to teach, but wanted to do research. Her realization sent her to
Brandeis University , mottoeng = "Truth even unto its innermost parts" , established = , type = Private research university , accreditation = NECHE , president = Ronald D. Liebowitz , pro ...
(1975-1977), where she did a second postdoc with Bob Abeles. This is where she learned the art and science of creating mechanism-based
enzyme inhibitor An enzyme inhibitor is a molecule that binds to an enzyme and blocks its activity. Enzymes are proteins that speed up chemical reactions necessary for life, in which substrate molecules are converted into products. An enzyme facilitates a sp ...
s. She also taught at
Yale School of Medicine The Yale School of Medicine is the graduate medical school at Yale University, a private research university in New Haven, Connecticut. It was founded in 1810 as the Medical Institution of Yale College and formally opened in 1813. The primary te ...
(1977-1980) as an assistant professor in the department of
pharmacology Pharmacology is a branch of medicine, biology and pharmaceutical sciences concerned with drug or medication action, where a drug may be defined as any artificial, natural, or endogenous (from within the body) molecule which exerts a biochemica ...
. In 1980, she moved to the
University of Wisconsin A university () is an institution of higher (or tertiary) education and research which awards academic degrees in several academic disciplines. Universities typically offer both undergraduate and postgraduate programs. In the United States, t ...
, serving as assistant professor in the
Biochemistry Biochemistry or biological chemistry is the study of chemical processes within and relating to living organisms. A sub-discipline of both chemistry and biology, biochemistry may be divided into three fields: structural biology, enzymology and ...
Department and rising to full professor in 1985. She was an assistant professor for a total of 12 years. In 1987, Stubbe became a professor in the MIT Chemistry Department, where she became the first woman to receive tenure in that department. She received a joint appointment in the
MIT Biology Department The MIT Department of Biology ("Course VII") is a center for research and teaching in the life sciences. Many members of the faculty hold joint appointments with other departments at MIT and with outside institutions. Faculty members faculty ...
in 1990.


Research

Stubbe has published over 300 scientific papers and has been frequently recognized for her research achievements. Before Stubbe's work, there were no chemical mechanisms that could be written for certain enzymes. She revolutionized the
biochemistry Biochemistry or biological chemistry is the study of chemical processes within and relating to living organisms. A sub-discipline of both chemistry and biology, biochemistry may be divided into three fields: structural biology, enzymology and ...
field with her first two scientific papers on enzymes
enolase Phosphopyruvate hydratase, usually known as enolase, is a metalloenzyme () that catalyses the conversion of 2-phosphoglycerate (2-PG) to phosphoenolpyruvate (PEP), the ninth and penultimate step of glycolysis. The chemical reaction is: :2-p ...
and
pyruvate kinase Pyruvate kinase is the enzyme involved in the last step of glycolysis. It catalyzes the transfer of a phosphate group from phosphoenolpyruvate (PEP) to adenosine diphosphate (ADP), yielding one molecule of pyruvate and one molecule of ATP. P ...
. Her first two publications in scientific journals showed the mechanisms for reactions that involved the enzymes enolase that
metabolizes Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
carbohydrate In organic chemistry, a carbohydrate () is a biomolecule consisting of carbon (C), hydrogen (H) and oxygen (O) atoms, usually with a hydrogen–oxygen atom ratio of 2:1 (as in water) and thus with the empirical formula (where ''m'' may or ma ...
s, and pyruvate kinase. Her first groundbreaking experiments were carried out in the late 1970s and early 1980s, while she was at Yale, then the University of Wisconsin. She was trying to understand how the hydroxyl group at the 2’ position of the ribonucleotide's sugar was replaced by the
hydrogen Hydrogen is the chemical element with the symbol H and atomic number 1. Hydrogen is the lightest element. At standard conditions hydrogen is a gas of diatomic molecules having the formula . It is colorless, odorless, tasteless, non-toxic, an ...
found in
deoxyribonucleotide A deoxyribonucleotide is a nucleotide that contains deoxyribose. They are the monomeric units of the informational biopolymer, deoxyribonucleic acid ( DNA). Each deoxyribonucleotide comprises three parts: a deoxyribose sugar (monosaccharide), a ni ...
s. To perform these experiments, she had to synthesize nucleotides that carried a heavy
isotope Isotopes are two or more types of atoms that have the same atomic number (number of protons in their nuclei) and position in the periodic table (and hence belong to the same chemical element), and that differ in nucleon numbers (mass numbers) ...
at specific positions. Stubbe reportedly kept a bed in her office since she worked around the clock on her experiments. Stubbe pioneered the use of
spectroscopic Spectroscopy is the field of study that measures and interprets the electromagnetic spectra that result from the interaction between electromagnetic radiation and matter as a function of the wavelength or frequency of the radiation. Matter wa ...
investigations of
enzyme Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrates, and the enzyme converts the substrates into different molecules known as products. A ...
interactions and has devoted most of her career to elucidating the biochemical mechanisms behind
free radicals In chemistry, a radical, also known as a free radical, is an atom, molecule, or ion that has at least one unpaired valence electron. With some exceptions, these unpaired electrons make radicals highly chemically reactive. Many radicals spont ...
. In her early work at Yale and then at the University of Wisconsin, Stubbe discovered how enzymes called ribonucleotide reductases use free-radical chemistry to convert
nucleotide Nucleotides are organic molecules consisting of a nucleoside and a phosphate. They serve as monomeric units of the nucleic acid polymers – deoxyribonucleic acid (DNA) and ribonucleic acid (RNA), both of which are essential biomolecules wi ...
s into deoxynucleotides, an essential process in
DNA repair DNA repair is a collection of processes by which a cell identifies and corrects damage to the DNA molecules that encode its genome. In human cells, both normal metabolic activities and environmental factors such as radiation can cause DNA dam ...
and replication. These enzymes catalyze the
rate-determining step In chemical kinetics, the overall rate of a reaction is often approximately determined by the slowest step, known as the rate-determining step (RDS or RD-step or r/d step) or rate-limiting step. For a given reaction mechanism, the prediction of the ...
in DNA biosynthesis. Her analysis of the nucleotide reduction process shed light on the mechanism of action of the Eli Lilly & Co. anti-cancer drug
gemcitabine Gemcitabine, with brand names including Gemzar, is a chemotherapy medication. It treats cancers including testicular cancer, breast cancer, ovarian cancer, non-small cell lung cancer, pancreatic cancer, and bladder cancer. It is administered by ...
, which is used to treat various
carcinoma Carcinoma is a malignancy that develops from epithelial cells. Specifically, a carcinoma is a cancer that begins in a tissue that lines the inner or outer surfaces of the body, and that arises from cells originating in the endodermal, mesodermal ...
s, such as
pancreatic cancer Pancreatic cancer arises when cell (biology), cells in the pancreas, a glandular organ behind the stomach, begin to multiply out of control and form a Neoplasm, mass. These cancerous cells have the malignant, ability to invade other parts of t ...
,
breast cancer Breast cancer is cancer that develops from breast tissue. Signs of breast cancer may include a lump in the breast, a change in breast shape, dimpling of the skin, milk rejection, fluid coming from the nipple, a newly inverted nipple, or a re ...
, and non-small cell
lung cancer Lung cancer, also known as lung carcinoma (since about 98–99% of all lung cancers are carcinomas), is a malignant lung tumor characterized by uncontrolled cell growth in tissue (biology), tissues of the lung. Lung carcinomas derive from tran ...
. Stubbe, in collaboration with John Kozarich, also elucidated the structure and function of
bleomycin -13- (1''H''-imidazol-5-yl)methyl9-hydroxy-5- 1''R'')-1-hydroxyethyl8,10-dimethyl-4,7,12,15-tetraoxo-3,6,11,14-tetraazapentadec-1-yl}-2,4'-bi-1,3-thiazol-4-yl)carbonyl]amino}propyl)(dimethyl)sulfonium , chemical_formula = , C=55 , H=84 , N=1 ...
, an antibiotic that is commonly used to treat cancer. They discovered how bleomycin induces DNA strand breaks in tumor cells, which in turn induces
apoptosis Apoptosis (from grc, ἀπόπτωσις, apóptōsis, 'falling off') is a form of programmed cell death that occurs in multicellular organisms. Biochemical events lead to characteristic cell changes (morphology) and death. These changes incl ...
. Before retiring, Stubbe studied the function of ribonucleotide reductases and the mechanisms of clinically useful drugs. She also extended her research into
polyhydroxybutyrate Polyhydroxybutyrate (PHB) is a polyhydroxyalkanoate (PHA), a polymer belonging to the polyesters class that are of interest as bio-derived and biodegradable plastics. The poly-3-hydroxybutyrate (P3HB) form of PHB is probably the most common type ...
s, a class of biodegradable
polymer A polymer (; Greek '' poly-'', "many" + ''-mer'', "part") is a substance or material consisting of very large molecules called macromolecules, composed of many repeating subunits. Due to their broad spectrum of properties, both synthetic a ...
s that can be synthesized by bacteria under certain conditions and then converted into plastics. Stubbe's other research interests included the design of so-called suicide inhibitors and mechanisms of DNA repair enzymes. Stubbe was active on several committees, including review boards for the
NIH The National Institutes of Health, commonly referred to as NIH (with each letter pronounced individually), is the primary agency of the United States government responsible for biomedical and public health research. It was founded in the late ...
grants committee and the editorial boards for various scientific journals.


Personal life

Stubbe's parents were teachers, and that is why she thought teaching is what she originally wanted to do as a career. Stubbe had a pet dog named Dr. McEnzyme Stubbe. The dog was a part of the research group and had its own email address and picture on the group's website.


Scientific societies

* 1991
American Academy of Arts and Sciences The American Academy of Arts and Sciences (abbreviation: AAA&S) is one of the oldest learned societies in the United States. It was founded in 1780 during the American Revolution by John Adams, John Hancock, James Bowdoin, Andrew Oliver, and ...
*1992
United States National Academy of Sciences The National Academy of Sciences (NAS) is a United States nonprofit, non-governmental organization. NAS is part of the National Academies of Sciences, Engineering, and Medicine, along with the National Academy of Engineering (NAE) and the Nati ...
(Biochemistry section) *2004
American Philosophical Society The American Philosophical Society (APS), founded in 1743 in Philadelphia, is a scholarly organization that promotes knowledge in the sciences and humanities through research, professional meetings, publications, library resources, and communit ...
*
American Chemical Society The American Chemical Society (ACS) is a scientific society based in the United States that supports scientific inquiry in the field of chemistry. Founded in 1876 at New York University, the ACS currently has more than 155,000 members at all d ...
*American Society for Biological Chemists *
Protein Society The Protein Society is an international, not-for-profit, scholarly society with the mission to provide forums for the advancement of research into protein structure, function, design and applications. History It was founded in 1986, with the lea ...


Awards and honors

* 1986
Pfizer Award in Enzyme Chemistry The Pfizer Award in Enzyme Chemistry, formerly known as the Paul-Lewis Award in Enzyme Chemistry was established in 1945. Consisting of a gold medal and honorarium, its purpose is to stimulate fundamental research in enzyme chemistry by scientists ...
* 1989 ICI – Stuart Pharmaceutical Award for Excellence in Chemistry * 1990 MIT teaching award * 1991 American Academy of Arts and Sciences Fellow Award * 1992 Myron L. Bender and Muriel S. Bender Distinguished Summer Lecturer,
Northwestern University Northwestern University is a private research university in Evanston, Illinois. Founded in 1851, Northwestern is the oldest chartered university in Illinois and is ranked among the most prestigious academic institutions in the world. Charte ...
*1993 Arthur C. Cope Scholar Award of the
American Chemical Society The American Chemical Society (ACS) is a scientific society based in the United States that supports scientific inquiry in the field of chemistry. Founded in 1876 at New York University, the ACS currently has more than 155,000 members at all d ...
* 1996 Richards Medal from northeastern section of ACS * 1997 Alfred Bader Award in Bioinorganic or Bioorganic Chemistry of the
American Chemical Society The American Chemical Society (ACS) is a scientific society based in the United States that supports scientific inquiry in the field of chemistry. Founded in 1876 at New York University, the ACS currently has more than 155,000 members at all d ...
*1998 F.A. Cotton Medal for Excellence in Chemical Research of the
American Chemical Society The American Chemical Society (ACS) is a scientific society based in the United States that supports scientific inquiry in the field of chemistry. Founded in 1876 at New York University, the ACS currently has more than 155,000 members at all d ...
* 2004 Repligen Award * 2005
John Scott Award John Scott Award, created in 1816 as the John Scott Legacy Medal and Premium, is presented to men and women whose inventions improved the "comfort, welfare, and happiness of human kind" in a significant way. "...the John Scott Medal Fund, establish ...
* 2008 Protein Society Emil Thomas Kaiser Award * 2008 National Academy of Sciences Award in Chemical Sciences * 2008 Kirkwood Medal *2009
American Chemical Society The American Chemical Society (ACS) is a scientific society based in the United States that supports scientific inquiry in the field of chemistry. Founded in 1876 at New York University, the ACS currently has more than 155,000 members at all d ...
's
Nakanishi Prize The Nakanishi Prize, named after Japanese chemist Koji Nakanishi, is an award in chemistry given alternately by the Chemical Society of Japan and the American Chemical Society. Purpose "To recognize and stimulate significant work that exten ...
for identifying the role of radical intermediates in ribonucleotide reductase functions. *2009
National Medal of Science The National Medal of Science is an honor bestowed by the President of the United States to individuals in science and engineering who have made important contributions to the advancement of knowledge in the fields of behavioral and social scienc ...
"for her groundbreaking experiments establishing the mechanisms of ribonucleotide reductases, polyester synthases, and natural product DNA cleavers — compelling demonstrations of the power of chemical investigations to solve problems in biology." *2009 Prelog Medal, Laboratory of Organic Chemistry at the Swiss Federal Institute of Technology, Zurich *2010 Benjamin Franklin Medal in Chemistry of
The Franklin Institute The Franklin Institute is a science museum and the center of science education and research in Philadelphia, Pennsylvania. It is named after the American scientist and statesman Benjamin Franklin. It houses the Benjamin Franklin National Memori ...
for uncovering the intricate processes by which cells safely use free radicals, for developing new cancer treatments, and for improving the production of environmentally-friendly polymers. * 2010
Welch Award The Welch Award in Chemistry is awarded annually by the Robert A. Welch Foundation The Welch Foundation, based in Houston, Texas, is one of the United States' oldest and largest private funding sources for chemistry researchers. It is a non-profi ...
for "fundamental research in biochemistry and enzymology." * 2010 Murray Goodman Memorial Prize * 2013 Honorary doctor of the Harvard University https://www.harvard.edu/on-campus/commencement/honorary-degrees Degrees * 2014 Penn Chemistry Distinguished Alumni Award * 2015 American Chemical Society
Remsen Award Ira Remsen (February 10, 1846 – March 4, 1927) was an American chemist who discovered the artificial sweetener saccharin along with Constantin Fahlberg. He was the second president of Johns Hopkins University. Early life Ira Remsen was born ...
*2017
Pearl Meister Greengard Prize The Pearl Meister Greengard Prize is an award for women scientists in biology given annually by the Rockefeller University. The Prize was founded by Nobel laureate Paul Greengard and his wife Ursula von Rydingsvard in honor of Greengard's moth ...
* 2020 American Chemical Society
Priestley Medal The Priestley Medal is the highest honor conferred by the American Chemical Society (ACS) and is awarded for distinguished service in the field of chemistry. Established in 1922, the award is named after Joseph Priestley, the discoverer of oxygen ...


References

{{DEFAULTSORT:Stubbe, Joanne Massachusetts Institute of Technology School of Science faculty 21st-century American chemists University of Pennsylvania alumni University of California, Berkeley alumni Living people Members of the United States National Academy of Sciences American women chemists 1946 births Fellows of the American Academy of Arts and Sciences Members of the American Philosophical Society National Medal of Science laureates 21st-century American women scientists