Immunoevasin
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Immunoevasins are
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
s expressed by some
virus A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Since Dmitri Ivanovsky's 1 ...
es that enable the virus to evade
immune In biology, immunity is the capability of multicellular organisms to resist harmful microorganisms. Immunity involves both specific and nonspecific components. The nonspecific components act as barriers or eliminators of a wide range of pathogens ...
recognition by interfering with
MHC I MHC class I molecules are one of two primary classes of major histocompatibility complex (MHC) molecules (the other being MHC class II) and are found on the cell surface of all nucleated cells in the bodies of vertebrates. They also occur on plat ...
complexes in the infected cell, therefore blocking the recognition of viral protein fragments by CD8+ cytotoxic T lymphocytes. Less frequently,
MHC II MHC Class II molecules are a class of major histocompatibility complex (MHC) molecules normally found only on professional antigen-presenting cells such as dendritic cells, mononuclear phagocytes, some endothelial cells, thymic epithelial cells, ...
antigen presentation Antigen presentation is a vital immune process that is essential for T cell immune response triggering. Because T cells recognize only fragmented antigens displayed on cell surfaces, antigen processing must occur before the antigen fragment, now ...
and induced-self molecules may also be targeted. Some viral immunoevasins block
peptide Peptides (, ) are short chains of amino acids linked by peptide bonds. Long chains of amino acids are called proteins. Chains of fewer than twenty amino acids are called oligopeptides, and include dipeptides, tripeptides, and tetrapeptides. A ...
entry into the
endoplasmic reticulum The endoplasmic reticulum (ER) is, in essence, the transportation system of the eukaryotic cell, and has many other important functions such as protein folding. It is a type of organelle made up of two subunits – rough endoplasmic reticulum ( ...
(ER) by targeting the
TAP transporter Transporter associated with antigen processing (TAP) protein complex belongs to the ATP-binding-cassette transporter family. It delivers cytosolic peptides into the endoplasmic reticulum (ER), where they bind to nascent MHC class I molecules. T ...
s. Immunoevasins are particularly abundant in viruses that are capable of establishing long-term infections of the host, such as herpesviruses.


Mechanism

Each step in the peptide loading and
presentation A presentation conveys information from a speaker to an audience. Presentations are typically demonstrations, introduction, lecture, or speech meant to inform, persuade, inspire, motivate, build goodwill, or present a new idea/product. Presenta ...
on
MHC I MHC class I molecules are one of two primary classes of major histocompatibility complex (MHC) molecules (the other being MHC class II) and are found on the cell surface of all nucleated cells in the bodies of vertebrates. They also occur on plat ...
(or
MHC II MHC Class II molecules are a class of major histocompatibility complex (MHC) molecules normally found only on professional antigen-presenting cells such as dendritic cells, mononuclear phagocytes, some endothelial cells, thymic epithelial cells, ...
) is a potential target for viral immunoevasins. These can range from targeting MHC I for
lysosomal A lysosome () is a membrane-bound organelle found in many animal Cell (biology), cells. They are spherical Vesicle (biology and chemistry), vesicles that contain Hydrolysis, hydrolytic enzymes that can break down many kinds of biomolecules. A ly ...
or
cytoplasm In cell biology, the cytoplasm is all of the material within a eukaryotic cell, enclosed by the cell membrane, except for the cell nucleus. The material inside the nucleus and contained within the nuclear membrane is termed the nucleoplasm. The ...
ic degradation, blocking TCR recognition of MHC I, inhibition of peptide transport into the ER or retention of MHC I in the ER or pre- Golgi. For MHC II, the possible evasion routes include MHC II-peptide assembly disruption, evading TCR recognition, MHC II degradation, and, conversely,
CD4 In molecular biology, CD4 (cluster of differentiation 4) is a glycoprotein that serves as a co-receptor for the T-cell receptor (TCR). CD4 is found on the surface of immune cells such as T helper cells, monocytes, macrophages, and dendritic ...
co-receptor A co-receptor is a cell surface receptor that binds a signalling molecule in addition to a primary receptor in order to facilitate ligand recognition and initiate biological processes, such as entry of a pathogen into a host cell. Properties The t ...
downregulation. Prevention of
NK cell Natural killer cells, also known as NK cells or large granular lymphocytes (LGL), are a type of cytotoxic lymphocyte critical to the innate immune system that belong to the rapidly expanding family of known innate lymphoid cells (ILC) and represen ...
activation may also be triggered by inhibition of presentation of induced-self molecules (
ligand In coordination chemistry, a ligand is an ion or molecule (functional group) that binds to a central metal atom to form a coordination complex. The bonding with the metal generally involves formal donation of one or more of the ligand's electr ...
s of
NKG2D NKG2D is an activating receptor (transmembrane protein) belonging to the NKG2 family of C-type lectin, C-type lectin-like receptors. NKG2D is encoded by ''KLRK1'' (killer cell lectin like receptor K1) gene which is located in the NK-gene complex ...
) or self molecules (MHC I) presentation (while also preventing the interaction with cytotoxic
T lymphocytes A T cell is a type of lymphocyte. T cells are one of the important white blood cells of the immune system and play a central role in the adaptive immune response. T cells can be distinguished from other lymphocytes by the presence of a T-cell rec ...
).


Examples


Herpes simplex virus (HSV-1 and HSV-2)

HSV produces a protein, ICP47, that binds to cytosolic surface of TAP, preventing peptides from ever entering the ER, which prevents the cascade reaction that leads to presenting the
MHC complex MHC may refer to: Biology *Major histocompatibility complex, a highly polymorphic region on chromosome 6 with genes particularly involved in immune functions *Myosin heavy chain, part of the motor protein myosin's quaternary protein structure Col ...
on the cell surface.Janeway. ''Immuno Biology''. Garland Science, Taylor & Francis Group, LLC, 2008. p. 189–190.


Human cytomegalovirus (HCMV)

Conversely to the HSV-1, the
ATP ATP may refer to: Companies and organizations * Association of Tennis Professionals, men's professional tennis governing body * American Technical Publishers, employee-owned publishing company * ', a Danish pension * Armenia Tree Project, non ...
-binding of TAP is inhibited by
HCMV ''Human betaherpesvirus 5'', also called human cytomegalovirus (HCMV), is species of virus in the genus ''Cytomegalovirus'', which in turn is a member of the viral family known as ''Herpesviridae'' or herpesviruses. It is also commonly called ...
US6 protein, indirectly resulting in decreased peptide transport to ER. Retention of MHC I in the ER and possibly also inhibition of
tapasin TAP-associated glycoprotein, also known as tapasin or TAPBP, is a protein that in humans is encoded by the ''TAPBP'' gene. Function The ''TAPBP'' gene encodes a transmembrane glycoprotein that mediates interaction between newly assembled majo ...
function may be attributed to US3 protein. US2 and US11 proteins forward newly-synthesized MHC I to degradation in cytoplasm by dislocating the MHC I from the ER membrane into the
cytosol The cytosol, also known as cytoplasmic matrix or groundplasm, is one of the liquids found inside cells (intracellular fluid (ICF)). It is separated into compartments by membranes. For example, the mitochondrial matrix separates the mitochondri ...
. UL16 is able to bind induced-self molecules MICB,
ULBP1 UL16 binding protein 1 (ULBP1) is a cell surface glycoprotein encoded by ''ULBP1'' gene located on the chromosome 6. ULBP1 is related to MHC class I molecules, but its gene maps outside the MHC locus. The domain structure of ULBP1 differs signific ...
and
ULBP2 UL16 binding protein 2 (ULBP2) is a cell surface glycoprotein encoded by ''ULBP2'' gene located on the chromosome 6. ULBP2 is related to MHC class I molecules, but its gene maps outside the MHC locus. The domain structure of ULBP2 differs significa ...
, ligands for
NKG2D NKG2D is an activating receptor (transmembrane protein) belonging to the NKG2 family of C-type lectin, C-type lectin-like receptors. NKG2D is encoded by ''KLRK1'' (killer cell lectin like receptor K1) gene which is located in the NK-gene complex ...
on
NK cells Natural killer cells, also known as NK cells or large granular lymphocytes (LGL), are a type of cytotoxic lymphocyte critical to the innate immune system that belong to the rapidly expanding family of known innate lymphoid cells (ILC) and represen ...
. Other immunoevasins, such as UL40, UL18, UL141, UL142 and pp65 also play a role in evading NK cell recognition.


Murine cytomegalovirus (MCMV)

In MCMV infection, m152 protein is capable of withholding MHC I in ER-Golgi intermediate compartment (
ERGIC The vesicular-tubular cluster (VTC), also referred to as the endoplasmic-reticulum–Golgi intermediate compartment (ERGIC), is an organelle in eukaryotic cells. This compartment mediates trafficking between the endoplasmic reticulum (ER) and Golg ...
). Together with the rest of m145 family, the proteins can also downregulate ligands of NKG2D, a group of induced-self receptors on NK cells. m06/gp48 protein binds to MHC I with the help of adaptor protein complex and directs it for lysosomal degradation from the secretory pathway. Another protein of MCMV, m04/gp34, can attach to MHC I in ER and, upon transport to the
cell membrane The cell membrane (also known as the plasma membrane (PM) or cytoplasmic membrane, and historically referred to as the plasmalemma) is a biological membrane that separates and protects the interior of all cells from the outside environment ( ...
, hinders the interaction of MHC I with TCR on cytotoxic T cells while inhibiting NK cell activation and
cytotoxicity Cytotoxicity is the quality of being toxic to cells. Examples of toxic agents are an immune cell or some types of venom, e.g. from the puff adder (''Bitis arietans'') or brown recluse spider (''Loxosceles reclusa''). Cell physiology Treating cells ...
by exhibiting MHC I molecules on cell surface. However, additional viral proteins may be required for successful transport of m04-bound MHC I to the cell membrane.


Varicella zoster virus (VZV)

VZV protein ORF66 is, similarly to m152 protein in MCMV, responsible for MHC I retention in
ERGIC The vesicular-tubular cluster (VTC), also referred to as the endoplasmic-reticulum–Golgi intermediate compartment (ERGIC), is an organelle in eukaryotic cells. This compartment mediates trafficking between the endoplasmic reticulum (ER) and Golg ...
.


Kaposi's sarcoma-associated herpesvirus (KSHV)

KSHV proteins K3 and K5 increase the rate of
endocytosis Endocytosis is a cellular process in which substances are brought into the cell. The material to be internalized is surrounded by an area of cell membrane, which then buds off inside the cell to form a vesicle containing the ingested material. E ...
and subsequent degradation of MHC I from cell membrane.


Human immunodeficiency virus (

HIV The human immunodeficiency viruses (HIV) are two species of ''Lentivirus'' (a subgroup of retrovirus) that infect humans. Over time, they cause acquired immunodeficiency syndrome (AIDS), a condition in which progressive failure of the immune ...
)

Nef protein is capable of directly binding to cytosolic regions of MHC I and targeting them for degradation in lysosomes from trans-Golgi. Nef and
Vpu VPU may refer to: Technology * Video processing unit and visual processing unit, related to graphics processing units * Vision processing unit, a class of processor intended for accelerating machine vision tasks * Vector processing unit, a specia ...
proteins can also direct CD4 co-receptor for lysosomal (Nef) or cytosolic proteasomal (Vpu) degradation, affecting the recognition of MHC II-bound peptides.


Human herpesvirus 7 (

HHV-7 ''Human betaherpesvirus 7'' (HHV-7) is one of nine known members of the ''Herpesviridae'' family that infects humans. HHV-7 is a member of ''Betaherpesvirinae'', a subfamily of the ''Herpesviridae'' that also includes HHV-6 and ''Cytomegalovirus ...
)

Protein U21 is responsible for targeting MHC I from the
secretory pathway 440px Secretion is the movement of material from one point to another, such as a secreted chemical substance from a cell or gland. In contrast, excretion is the removal of certain substances or waste products from a cell or organism. The classical ...
for lysosomal degradation.


Epstein-Barr virus (EBV)

MHC II molecule (
HLA-DR HLA-DR is an MHC class II cell surface receptor encoded by the human leukocyte antigen complex on chromosome 6 region 6p21.31. The complex of HLA-DR (Human Leukocyte Antigen – DR isotype) and peptide, generally between 9 and 30 amino acids in l ...
) acts as a co-receptor for the EBV entry into the cell upon binding the gp42 viral protein. Upon
proteolytic cleavage Proteolysis is the breakdown of proteins into smaller polypeptides or amino acids. Uncatalysed, the hydrolysis of peptide bonds is extremely slow, taking hundreds of years. Proteolysis is typically catalysed by cellular enzymes called proteases, ...
and secretion of gp42, the protein can bind to MHC II, hindering the interaction with CD4+ T helper lymphocytes. BNLF2a protein, which is present only in the replicative phase of the
viral life cycle Viruses are only able to Replicate (biology), replicate themselves by commandeering the reproductive apparatus of cells and making them reproduce the virus's genetic structure and virion, particles instead. How viruses do this depends mainly on t ...
, functions as an inhibitor of TAP, blocking both peptide and ATP binding.


Adenovirus 5

The inhibition of interaction between TAP and tapasin (needed for peptide loading on the MHC I), as well as retention of MHC I in the ER, is accomplished by
adenoviral Adenoviruses (members of the family ''Adenoviridae'') are medium-sized (90–100 nm), nonenveloped (without an outer lipid bilayer) viruses with an icosahedral nucleocapsid containing a double-stranded DNA genome. Their name derives from thei ...
E19 protein.


Murine herpesvirus 68 ( MHV-68)

The protein
mK3 MK3 may refer to: * ''Mortal Kombat 3'', the third game in the '' Mortal Kombat'' series * '' Mario Kart: Super Circuit'', the third game in the ''Mario Kart'' series, released in 2001 for the Game Boy Advance The (GBA) is a 32-bit handheld ...
acts in a multitude of ways, including TAP complex destabilization and dislocation of MHC I to cytoplasm.


Other

TAP function can also be inhibited by UL49.5 protein produced by
bovine herpesvirus 1 ''Bovine alphaherpesvirus 1'' (BoHV-1) is a virus of the family ''Herpesviridae'' and the subfamily ''Alphaherpesvirinae'', known to cause several diseases worldwide in cattle, including rhinotracheitis, vaginitis, balanoposthitis, abortion, co ...
,
pseudorabies virus Aujeszky's disease, usually called pseudorabies in the United States, is a viral disease in swine that has been endemic in most parts of the world. It is caused by ''Suid herpesvirus 1'' (SuHV-1). Aujeszky's disease is considered to be the mos ...
, and
equine herpesvirus 1 ''Equid alphaherpesvirus 1'', formerly ''Equine herpesvirus 1'' (EHV-1), is a virus of the family ''Herpesviridae'' that causes abortion, respiratory disease and occasionally neonatal mortality in horses. Initial spread of EHV-1 by a newly intro ...
.


Research and therapeutic significance

Thanks to the research on immunoevasins, several molecular mechanisms were clarified, such as MHC I processing mechanism, TAP-independent peptide presentation, MHC I peptide-loading complex ( PLC)-independent antigen presentation pathways,
cross-presentation Cross-presentation is the ability of certain professional antigen-presenting cells (mostly dendritic cells) to take up, process and present ''extracellular'' antigens with MHC class I molecules to CD8 T cells (cytotoxic T cells). Cross-priming, the ...
and ER-associated degradation (
ERAD Endoplasmic-reticulum-associated protein degradation (ERAD) designates a Cell (biology), cellular pathway which targets misfolded proteins of the endoplasmic reticulum for ubiquitination and subsequent degradation by a protein-degrading complex, c ...
). In the future, the use or knockouts of immunoevasins (where
mutated In biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, mitos ...
or deleted immunoevasin
genes In biology, the word gene (from , ; "...Wilhelm Johannsen coined the word gene to describe the Mendelian units of heredity..." meaning ''generation'' or ''birth'' or ''gender'') can have several different meanings. The Mendelian gene is a ba ...
would not interfere with antigen presentation on MHC I complexes upon viral infection, resulting in recognition and targeting of infected cells by T cells) may be used for
vaccine A vaccine is a biological Dosage form, preparation that provides active acquired immunity to a particular infectious disease, infectious or cancer, malignant disease. The safety and effectiveness of vaccines has been widely studied and verifie ...
development for HCMV,
gene therapy Gene therapy is a medical field which focuses on the genetic modification of cells to produce a therapeutic effect or the treatment of disease by repairing or reconstructing defective genetic material. The first attempt at modifying human DN ...
, transplantation and tumor-specific
immunotherapy Immunotherapy or biological therapy is the treatment of disease by activating or suppressing the immune system. Immunotherapies designed to elicit or amplify an immune response are classified as ''activation immunotherapies,'' while immunotherap ...
.


References

{{Reflist Viral protein class