Dystrobrevin
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Dystrobrevin is a
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, res ...
that binds to
dystrophin Dystrophin is a rod-shaped cytoplasmic protein, and a vital part of a protein complex that connects the cytoskeleton of a muscle fiber to the surrounding extracellular matrix through the cell membrane. This complex is variously known as the cost ...
in the
costamere The costamere is a structural-functional component of striated muscle cells which connects the sarcomere of the muscle to the cell membrane (i.e. the sarcolemma).20: 2327-2331 Costameres are sub-sarcolemmal protein assemblies circumferentially a ...
of skeletal muscle cells. In humans, there are at least two
isoforms A protein isoform, or "protein variant", is a member of a set of highly similar proteins that originate from a single gene or gene family and are the result of genetic differences. While many perform the same or similar biological roles, some iso ...
of dystrobrevin,
dystrobrevin alpha Dystrobrevin alpha is a protein that in humans is encoded by the ''DTNA'' gene. Function The protein encoded by this gene belongs to the dystrobrevin subfamily and the dystrophin family. This protein is a component of the dystrophin-associated ...
and dystrobrevin beta. Dystrobrevins are members of dystrophin-related protein family which are thought to play an important role in intracellular signal transduction and provide a membrane
scaffold Scaffolding, also called scaffold or staging, is a temporary structure used to support a work crew and materials to aid in the construction, maintenance and repair of buildings, bridges and all other man-made structures. Scaffolds are widely used ...
in muscle. Defects in dystrobrevins and their associated proteins cause a range of
neuromuscular disease A neuromuscular disease is any disease affecting the peripheral nervous system (PNS), the neuromuscular junction, or skeletal muscle, all of which are components of the motor unit. Damage to any of these structures can cause muscle atrophy and wea ...
s such as
muscular dystrophies Muscular dystrophies (MD) are a genetically and clinically heterogeneous group of rare neuromuscular diseases that cause progressive weakness and breakdown of skeletal muscles over time. The disorders differ as to which muscles are primarily affe ...
. Dystrobrevin was first identified by isolating from the electric organ of the electric ray '' Torpedo californica.'' It is a
phosphoprotein A phosphoprotein is a protein that is posttranslationally modified by the attachment of either a single phosphate group, or a complex molecule such as 5'-phospho-DNA, through a phosphate group. The target amino acid is most often serine, threonin ...
, which weights 87 kDa, associated with the postsynaptic membrane at the cytoplasmic face. Dystrobrevin proteins have been said to participates in the formation and stability of synapses because it copurifies with acetylcholine receptors from ''Torpedo'' electric organ membranes. In 1997, an experiment was done using the yeast two-hybrid model to identify protein-protein interaction between dystrobrevin and
dystrophin-associated protein complex The dystrophin-associated protein complex, also known as the dystrophin-associated glycoprotein complex is a multiprotein complex that includes dystrophin and the dystrophin-associated proteins. It is one of the two protein complexes that make up ...
(DPC). The evidence suggested that dystrobrevin works as a motor protein receptor that might play an important role in the transport of components of the dystrophin-associated protein complex to specific intracellular sites. The DPC is expressed in both muscle and non-muscle tissues. It works as a mechanical component of cells and a dynamic multifunctional structure that can serve as a
scaffold Scaffolding, also called scaffold or staging, is a temporary structure used to support a work crew and materials to aid in the construction, maintenance and repair of buildings, bridges and all other man-made structures. Scaffolds are widely used ...
for signaling molecules. The dystrophin-associated proteins can be divided into three groups depending on their cellular localization: extracellular,
transmembrane A transmembrane protein (TP) is a type of integral membrane protein that spans the entirety of the cell membrane. Many transmembrane proteins function as gateways to permit the transport of specific substances across the membrane. They frequent ...
, and
cytoplasm In cell biology, the cytoplasm is all of the material within a eukaryotic cell, enclosed by the cell membrane, except for the cell nucleus. The material inside the nucleus and contained within the nuclear membrane is termed the nucleoplasm. ...
ic. Dystrobrevin protein is a part of the cytoplasmic complex and an intracellular protein that binds directly to dystrophin. In invertebrates, dystrobrevin is present as a single protein, while in vertebrates, there are two isoforms, a-dystrobrevin (DTNA) and β-dystrobrevin (DTNB). Each dystrobrevin isoform has a unique structure with carboxyl termini and sequence homology with the cysteine-rich carboxyl-terminal region of dystrophin. This region of similarity can be divided into several functional domains such as two coiled-coil regions, two
EF hand The EF hand is a helix–loop–helix structural domain or ''motif'' found in a large family of calcium-binding proteins. The EF-hand motif contains a helix–loop–helix topology, much like the spread thumb and forefinger of the human hand, i ...
s or a ZZ-type zinc finger.


Evolutionary History

A phylogenic tree for the dystrophin protein family has been proposed based on the analysis of known dystrobrevin and dystrophin sequences that were extracted from human and fruit fly proteins. The
phylogeny A phylogenetic tree (also phylogeny or evolutionary tree Felsenstein J. (2004). ''Inferring Phylogenies'' Sinauer Associates: Sunderland, MA.) is a branching diagram or a tree showing the evolutionary relationships among various biological spe ...
postulated a non-metazoan ancestor that had a single dystrophin/dystrobrevin protein, which probably functioned as a
homodimer In biochemistry, a protein dimer is a macromolecular complex formed by two protein monomers, or single proteins, which are usually non-covalently bound. Many macromolecules, such as proteins or nucleic acids, form dimers. The word ''dimer'' has ...
. At some point before the last common ancestor of metazoans, a duplication lead to a separation of dystrophin and dystrobrevin genes, their protein products forming a heterodimer of more specialized components. In vertebrates, two other duplications occurred. The first gave rise to DRP2, a common ancestor of dystrophin and
utrophin Utrophin is a protein that in humans is encoded by the ''UTRN'' gene. The protein encoded by this gene is a component of the cytoskeleton. Utrophin was found during research into Duchenne's muscular dystrophy. The name is a contraction for ''ubiq ...
, and to α- and β-dystrobrevin. The second resulted in the separate dystrophin and utrophin genes. In addition, sequence alignments of dystrophin family protein strongly support the concept that two distinct subfamilies exist, one consisted of dystrophin, utrophin, and DRP2 and the other consisted of α- and β-dystrobrevin.


Classification

Dystrobrevins are the product of two distinct genes coding for two highly homologous proteins, α- and β-dystrobrevin. Several different transcripts are derived from each gene by alternative splicing or initiation sites, generating a large family of dystrobrevin isoforms.


Alpha Dystrobrevin

The α-dystrobrevin structure is homologous to the cysteine-rich carboxy-terminal domain of dystrophin. This protein is expressed predominantly in skeletal muscle, heart, lung, and central nervous system. It is thought to be involved in synaptic transmission at the neuromuscular junction and in
intracellular signaling In biology, cell signaling (cell signalling in British English) or cell communication is the ability of a cell to receive, process, and transmit signals with its environment and with itself. Cell signaling is a fundamental property of all cellula ...
.


Beta Dystrobrevins

The β-dystrobrevin, is only found in non-muscle tissues, predominantly expressed in kidney and brain, and forms complexes with dystrophin-associated proteins and syntrophin in liver and brain. In the brain, β-dystrobrevin associates with dystrophin isoforms in the cortex,
hippocampus The hippocampus (via Latin from Greek , ' seahorse') is a major component of the brain of humans and other vertebrates. Humans and other mammals have two hippocampi, one in each side of the brain. The hippocampus is part of the limbic system, ...
, and Purkinje neurons.


Gene and transcripts

The human α-dystrobrevin gene is localized to
chromosome A chromosome is a long DNA molecule with part or all of the genetic material of an organism. In most chromosomes the very long thin DNA fibers are coated with packaging proteins; in eukaryotic cells the most important of these proteins are ...
18 and consists of 23 coding exons. α-Dystrobrevin is known to be subject to extensive splicing regulation. The alternative usage of three exons 21, 17B, and 11B generates RNA molecules with different lengths encoding three major α-dystrobrevin products in human skeletal muscle: α-dystrobrevin 1, α-dystrobrevin 2, and α-dystrobrevin 3. Due to alternative splicing within the coding regions, supplemental diversity is observed referred to as variable regions 1, 2, and 3 Firstly, variable region 1 (vr1) consists of a short exon containing three
amino acid Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. Although hundreds of amino acids exist in nature, by far the most important are the alpha-amino acids, which comprise proteins. Only 22 alpha a ...
s. In mice, the transcripts including this exon are primarily restricted to the brain but are present in the brain, heart, and skeletal muscle in humans. Secondly, variable region 2 (vr2) consists of exons 17A and 17B which encodes the unique C-terminal tail of α-dystrobrevin 2. Lastly, variable region 3 (vr3) consists of exons 11A, 11B, and 12, and exon 11B encodes the unique C-terminal tail of α-dystrobrevin 3. In mouse skeletal muscle, the splicing of vr2 and vr3 has been reported to be developmentally controlled. The human β-dystrobrevin gene was localized to the short arm of chromosome 2. Pair-wise comparison between α- and β-dystrobrevin sequences revealed that the two dystrobrevins have 76% identity.


Structure of protein

α- and β-Dystrobrevin proteins structure consisted of four major domains, a ZZ -type
zinc finger A zinc finger is a small protein structural motif that is characterized by the coordination of one or more zinc ions (Zn2+) in order to stabilize the fold. It was originally coined to describe the finger-like appearance of a hypothesized struct ...
domain, two
EF-hand The EF hand is a helix–loop–helix structural domain or ''motif'' found in a large family of calcium-binding proteins. The EF-hand motif contains a helix–loop–helix topology, much like the spread thumb and forefinger of the human hand, in ...
regions, an α-helical coiled-coil domain containing a dystrophin
binding site In biochemistry and molecular biology, a binding site is a region on a macromolecule such as a protein that binds to another molecule with specificity. The binding partner of the macromolecule is often referred to as a ligand. Ligands may includ ...
, and a
tyrosine kinase A tyrosine kinase is an enzyme that can transfer a phosphate group from ATP to the tyrosine residues of specific proteins inside a cell. It functions as an "on" or "off" switch in many cellular functions. Tyrosine kinases belong to a larger cla ...
substrate domain. α-Dystrobrevin 1, α-Dystrobrevin 2, and α-dystrobrevin 3 binds to the dystrophin-glycoprotein complex via the amino-terminus region. α-Dystrobrevin 1 and α-Dystrobrevin 2 bind dystrophin through a highly conserved coiled-coil domain. β-dystrobrevin is detected as a 61-kDa protein in the brain, kidney, liver, and lung. β-dystrobrevin can be distinguished from α-dystrobrevin 2 because it has lower relative mobility. Slight differences in the size of the β-dystrobrevin were observed in the brain compared with the kidney, liver, and lung.


Localization

α-Dystrobrevin 1 is localized in the
sarcolemma The sarcolemma (''sarco'' (from ''sarx'') from Greek; flesh, and ''lemma'' from Greek; sheath) also called the myolemma, is the cell membrane surrounding a skeletal muscle fiber or a cardiomyocyte. It consists of a lipid bilayer and a thin oute ...
and is abundant at the neuromuscular junction, and concentrated in the crest of the junctional folds. α-Dystrobrevin 2 is localized around the entire circumference of the sarcolemmal plasma membrane including the neuromuscular junction. α-Dystrobrevin 2 primarily co-localizes with dystrophin at the neuromuscular junction, while α-Dystrobrevin 1 co-localizes with both
dystrophin Dystrophin is a rod-shaped cytoplasmic protein, and a vital part of a protein complex that connects the cytoskeleton of a muscle fiber to the surrounding extracellular matrix through the cell membrane. This complex is variously known as the cost ...
and
utrophin Utrophin is a protein that in humans is encoded by the ''UTRN'' gene. The protein encoded by this gene is a component of the cytoskeleton. Utrophin was found during research into Duchenne's muscular dystrophy. The name is a contraction for ''ubiq ...
. α-Dystrobrevin 3 has been thought to be located on the cytoplasmic site.   The location and expression pattern of β-dystrobrevin was observed by using
Northern blot The northern blot, or RNA blot,Gilbert, S. F. (2000) Developmental Biology, 6th Ed. Sunderland MA, Sinauer Associates. is a technique used in molecular biology research to study gene expression by detection of RNA (or isolated mRNA) in a sample ...
s of mouse RNAs. A single 2.5-kb transcript was detected predominantly in the brain and kidney and to a lesser extent in liver and lung. No β-dystrobrevin transcripts were detected in skeletal and
cardiac muscle Cardiac muscle (also called heart muscle, myocardium, cardiomyocytes and cardiac myocytes) is one of three types of vertebrate muscle tissues, with the other two being skeletal muscle and smooth muscle. It is an involuntary, striated muscle th ...
even after long exposures. This evidence suggested that the β-dystrobrevin transcript was weakly expressed or absent in muscle.


Function

The fundamental role of the dystrobrevin protein family remains unclear. Much of what we do know has been observation from biochemical studies of associated proteins and the phenotypic consequences of their loss. α-Dystrobrevin proteins are suggested to involve in the structural integrity of muscle cells by interacting with cytoskeletal binding proteins and signal transduction by interacting with syntrophin. Firstly, α-Dystrobrevin is a component of the dystrophin- glycoprotein complex, which is extremely useful for maintenance of the skeletal cell integrity. α-dystrobrevin associated with dystrophin at its coil-coil region and with a
sarcoglycan The sarcoglycans are a family of transmembrane proteins (α, β, γ, δ or ε) involved in the protein complex responsible for connecting the muscle fibre cytoskeleton to the extracellular matrix, preventing damage to the muscle fibre sarcolemma t ...
-protein complex at the amino-terminal. It has been proposed to function as a structural scaffold linking the dystrophin-glycoprotein complex to the intracellular cytoskeleton. Based on the yeast two-hybrid system and co-immunoprecipitation analysis, three other proteins were identified as additional to α-dystrobrevin-binding proteins: β-synemin,
syncoilin Discovery Syncoilin is a muscle-specific atypical type III intermediate filament protein encoded in the human by the gene ''SYNC''. It was first isolated as a binding partner to α-dystrobrevin, as determined by a yeast two-hybrid assay. Late ...
, and
dysbindin Dysbindin, short for dystrobrevin-binding protein 1, is a protein constituent of the dystrophin-associated protein complex (DPC) of skeletal muscle cells. It is also a part of BLOC-1, or biogenesis of lysosome-related organelles complex 1. Dysbi ...
. Syncoilin and β-synemin are both intermediate filament proteins. The intermediate filaments are responsible for forming the structure of the cell cytoskeleton and providing mechanical stability to the cells. Syncoilin co-localizes with α-dystrobrevin at both the neuromuscular junction and sarcolemma while β-Synemin co-localizes with α-dystrobrevin only at the neuromuscular junction. The interaction of α-dystrobrevin and β-synemin provides an additional connection between the intermediate filament system and the dytsrophin-glycoprotein complex. Dysbindin is located at the sarcolemma, and its expression in skeletal muscle is relatively low. Secondly, α-Dystrobrevins participate in intracellular signaling since they bind directly with syntrophin, which is a modular adaptor protein thought to be involved in signal transduction. In skeletal muscle, syntrophins have four main isoforms: α-, β1-, β2-, and γ2-syntrophin. β-dystrobrevin has been thought to play a structural role in the composition of the dystrophin-associated protein complex in the brain which differs from that in muscle. β-dystrobrevin coimmunoprecipitates with the dystrophin isoforms Dp71 and Dp140 in the brain. Dp140 is concentrated in the brain
microvasculature The microcirculation is the circulation of the blood in the smallest blood vessels, the microvessels of the microvasculature present within organ tissues. The microvessels include terminal arterioles, metarterioles, capillaries, and venules. ...
while the Dp71 transcript is found throughout the brain but is particularly abundant in the
dentate gyrus The dentate gyrus (DG) is part of the hippocampal formation in the temporal lobe of the brain, which also includes the hippocampus and the subiculum. The dentate gyrus is part of the hippocampal trisynaptic circuit and is thought to contribute t ...
of the
temporal lobe The temporal lobe is one of the four major lobes of the cerebral cortex in the brain of mammals. The temporal lobe is located beneath the lateral fissure on both cerebral hemispheres of the mammalian brain. The temporal lobe is involved in pro ...
, and the
olfactory bulb The olfactory bulb (Latin: ''bulbus olfactorius'') is a neural structure of the vertebrate forebrain involved in olfaction, the sense of smell. It sends olfactory information to be further processed in the amygdala, the orbitofrontal cortex ( ...
.


Dystrobrevins and muscle diseases

The consequences of null mutation are known for humans and
rodent Rodents (from Latin , 'to gnaw') are mammals of the order Rodentia (), which are characterized by a single pair of continuously growing incisors in each of the upper and lower jaws. About 40% of all mammal species are rodents. They are n ...
s in the case of
dystrophin Dystrophin is a rod-shaped cytoplasmic protein, and a vital part of a protein complex that connects the cytoskeleton of a muscle fiber to the surrounding extracellular matrix through the cell membrane. This complex is variously known as the cost ...
,
utrophin Utrophin is a protein that in humans is encoded by the ''UTRN'' gene. The protein encoded by this gene is a component of the cytoskeleton. Utrophin was found during research into Duchenne's muscular dystrophy. The name is a contraction for ''ubiq ...
, and α-dystrobrevin, and for nematode in the case of dystrophin and dystrobrevin. In human, the
Duchenne muscular dystrophy Duchenne muscular dystrophy (DMD) is a severe type of muscular dystrophy that primarily affects boys. Muscle weakness usually begins around the age of four, and worsens quickly. Muscle loss typically occurs first in the thighs and pelvis follow ...
is a well-known muscle disease which highlights the importance of dystrophin/ dystrobrevin protein to function of muscle tissue. Duchenne muscular dystrophy (DMD) is a fatal progressive disease of both cardiac and skeletal muscle resulting from the
mutation In biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA replication, DNA or viral repl ...
s in the DMD gene and loss of the protein dystrophin. The lack of dystrophin that causes Duchenne muscular dystrophy results in secondary loss of other dystrophin-complex components from the membrane. The loss of protein dystrophin ultimately leads to a lethal syndrome of skeletal and cardiac myopathy, stationary night blindness, mental retardation, a cardiac-conduction defect, and a subtle smooth-muscle defect. Some of these traits are also found in a subset of the limb-girdle muscular dystrophies that result from
sarcoglycan The sarcoglycans are a family of transmembrane proteins (α, β, γ, δ or ε) involved in the protein complex responsible for connecting the muscle fibre cytoskeleton to the extracellular matrix, preventing damage to the muscle fibre sarcolemma t ...
defects. α-Dystrobrevin proteins were found absent in a heart that is highly susceptible to injury during cardiac stress. The dystrobrevin loss resulted from a weakening of dystrophin's interaction with the membrane-bound dystrophin-glycoprotein complex, and lead to a significant loss of membrane integrity.


References


External links

* {{Muscle tissue