A. Jamie Cuticchia
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Anthony James Cuticchia Jr. (December 28, 1966 – January 6, 2022) was an American scientist with expertise in the fields of
genetics Genetics is the study of genes, genetic variation, and heredity in organisms.Hartl D, Jones E (2005) It is an important branch in biology because heredity is vital to organisms' evolution. Gregor Mendel, a Moravian Augustinian friar wor ...
,
bioinformatics Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combi ...
, and
genomics Genomics is an interdisciplinary field of biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, three-dim ...
. In particular, he was responsible for the collection of the data constituting the human gene map, prior to the final sequencing of the genome. He was also a practicing
attorney Attorney may refer to: * Lawyer ** Attorney at law, in some jurisdictions * Attorney, one who has power of attorney * ''The Attorney'', a 2013 South Korean film See also * Attorney general, the principal legal officer of (or advisor to) a gove ...
. He died due to cancer on January 6, 2022.


Early life

He grew up in College Park, Maryland. He received his B.A. in Biological Sciences, with honors, from the
University of Maryland, Baltimore County The University of Maryland, Baltimore County (UMBC) is a public research university in Baltimore County, Maryland. It has a fall 2022 enrollment of 13,991 students, 61 undergraduate majors, over 92 graduate programs (38 master, 25 doctoral, ...
in 1987. In March 1992, he completed his
Ph.D. A Doctor of Philosophy (PhD, Ph.D., or DPhil; Latin: or ') is the most common degree at the highest academic level awarded following a course of study. PhDs are awarded for programs across the whole breadth of academic fields. Because it is a ...
in
Genetics Genetics is the study of genes, genetic variation, and heredity in organisms.Hartl D, Jones E (2005) It is an important branch in biology because heredity is vital to organisms' evolution. Gregor Mendel, a Moravian Augustinian friar wor ...
at the
University of Georgia , mottoeng = "To teach, to serve, and to inquire into the nature of things.""To serve" was later added to the motto without changing the seal; the Latin motto directly translates as "To teach and to inquire into the nature of things." , establ ...
studying under population scientist Jonathan Arnold. He went on to receive a J.D. magna cum laude, from the
North Carolina Central University School of Law The North Carolina Central University School of Law (also known as NCCU School of Law or NCCU Law) is the law school associated with North Carolina Central University. The school is fully accredited by the American Bar Association (ABA) and the ...
in 2009.


Accomplishments

In the late 1980s Cuticchia applied the probabilistic metaheuristic method of simulated annealing as a method for genomic mapping. Through the use of binary fingerprinting of DNA (assigning the presence or absence of a particular sequence a 1/0) it was possible to quickly map the genome of
Aspergillus nidulans ''Aspergillus nidulans'' (also called ''Emericella nidulans'' when referring to its sexual form, or teleomorph) is one of many species of filamentous fungi in the phylum Ascomycota. It has been an important research organism for studying eukaryot ...
. This was one of the first genomes physically mapped In addition to his work in the development of mapping tools, in 1988, along with others, he applied the
Markov chain A Markov chain or Markov process is a stochastic model describing a sequence of possible events in which the probability of each event depends only on the state attained in the previous event. Informally, this may be thought of as, "What happe ...
model to predict the occurrence of DNA patterns. He was the original Data Manager of the GDB Human Genome Database and served as its director both in Toronto at The Hospital for Sick Children as well as at RTI International. He published several books on the human genome during the genetic mapping phase of the
human genome project The Human Genome Project (HGP) was an international scientific research project with the goal of determining the base pairs that make up human DNA, and of identifying, mapping and sequencing all of the genes of the human genome from both a ...
.


Career

* Johns Hopkins School of Medicine: In 1992 he took a position as Assistant Professor of Medical Genetics at The Johns Hopkins University School of Medicine. During that period he served as Data Manager for the GDB and later as Director of Data Acquisition and Curation. He remained an adjunct professor with Johns Hopkins until 2001. * Mitre Corporation: In 1995 he took the position of Director of Computational Biology and developed a consulting business for the company in McLean Virginia. * ChemGenics Pharmaceuticals: In 1997 Cuticchia moved to Boston, where he took on an executive position as Director of Genomics and Information technology at ChemGenics Pharmaceuticals. In 1998 the company was merged with Millennium Pharmaceuticals, and Cuticchia returned to academics. * Hospital for Sick Children: In 1998 Cuticchia took the first of several roles at the HSC. Initially appointed as Director of Bioinformatics, he later raised approximately $52,000,000 in research support to form numerous projects and organizations. First, he relocated the GDB to HSC while maintaining some of its operations at Johns Hopkins. Later, he established the Ontario Center for Genomic Computing, which was one of the Top 500 supercomputing sites in the world. * RTI International: In 2002 he returned to the United States to build a bioinformatics department at the Research Triangle Institute. *
Duke University School of Medicine The Duke University School of Medicine, commonly known as Duke Med, is the medical school of Duke University. It is located in the Collegiate Gothic-style West Campus of Duke University in Durham, North Carolina. The School of Medicine, along wit ...
: From 2006, Cuticchia served in various bioinformatics related roles at Duke. In 2008 he was named the Duke Bioinformatics Scholar and built a research portfolio in cancer bioinformatics. * AJC Legal Services: In 2010, Cuticchia applied his newly acquired license to practice law in North Carolina focusing on biotechnology and pharmaceutical law. *
North Carolina Central University North Carolina Central University (NCCU or NC Central) is a public historically black university in Durham, North Carolina. Founded by James E. Shepard in affiliation with the Chautauqua movement in 1909, it was supported by private funds from b ...
: From 2010, Cuticchia taught undergraduates and law students in courses including: Patent Law, Genetics and the Law, and FDA Regulations


Biotechnology involvement

Cuticchia was a scientific founder of New Chemical Entities, a drug discovery and information company founded in 1997. In 1999 it merged with Thetagen, a provided of
pharmacogenomic Pharmacogenomics is the study of the role of the genome in drug response. Its name ('' pharmaco-'' + ''genomics'') reflects its combining of pharmacology and genomics. Pharmacogenomics analyzes how the genetic makeup of an individual affects the ...
services. New Chemical Entities was merged with Albany Molecular Research in 2001.


Awards

Cuticchia won numerous awards including: * National Cancer Institute caBIG Outstanding Achievement Award for his work in developing bioinformatics tools for the NCI in 2007. * Numerous awards from the Research Triangle Institute including the Presidential Award for his work in the development of bioinformatics. * He was ranked as one of the Top Three Bioinformatics Scientists by Genome Technology in 2001. * In 2003 he was inducted in the GT All-Stars Academy for his international contributions in bioinformatics.The 2003 Genome Technology All-Stars Genome Technology GenomeWeb
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Bibliography


Books

* ''Chromosome Coordinating Meeting 1992 (CCM92 : Baltimore Conference)'','' with P.L. Pearson, Basel: S. Karger Pub, 1993, * ''Human Gene Mapping, 1993: A Compendium'', Baltimore: Johns Hopkins University Press, 1994, * ''Human Gene Mapping, 1994: A Compendium'', Baltimore: Johns Hopkins University Press, 1995, * ''Human Gene Mapping, 1995: A Compendium'', Baltimore: Johns Hopkins University Press, 1996, * ''Methods of Microarray Data Analysis VI'', Scotts Valley: Create Space Publishing, 2009, * ''Genetics: A Handbook for Lawyers'', Chicago, ABA Book Publishing, 2010, * ''The Letter: A Satirical Look at Becoming a Lawyer'', CS Publishing, 2012,


References


External links


GDB
on web.archive.org (No Longer in Service) {{DEFAULTSORT:Cuticchia, A. Jamie 1966 births 2022 deaths American geneticists American bioinformaticians University of Georgia alumni Scientists from Washington, D.C.