Ureibacillus Composti
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Ureibacillus Composti
''Ureibacillus composti'' is a Gram-positive, rod-shaped and thermophilic bacterium from the genus of ''Ureibacillus'' which has been isolated from livestock-manure compost from Ichon in South Korea South Korea, officially the Republic of Korea (ROK), is a country in East Asia, constituting the southern part of the Korea, Korean Peninsula and sharing a Korean Demilitarized Zone, land border with North Korea. Its western border is formed .... References Bacillales Bacteria described in 2007 {{Firmicutes-stub ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Bacillota
The Bacillota (synonym Firmicutes) are a phylum of bacteria, most of which have gram-positive cell wall structure. The renaming of phyla such as Firmicutes in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The name "Firmicutes" was derived from the Latin words for "tough skin," referring to the thick cell wall typical of bacteria in this phylum. Scientists once classified the Firmicutes to include all gram-positive bacteria, but have recently defined them to be of a core group of related forms called the low- G+C group, in contrast to the Actinomycetota. They have round cells, called cocci (singular coccus), or rod-like forms (bacillus). A few Firmicutes, such as ''Megasphaera'', ''Pectinatus'', ''Selenomonas'' and ''Zymophilus'', have a porous pseudo-outer membrane that causes them to stain gram-negative. Many Bacillota (Firmicutes) produce endospores, which are resistant to desiccation and can ...
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Bacilli
Bacilli is a taxonomic class of bacteria that includes two orders, Bacillales and Lactobacillales, which contain several well-known pathogens such as ''Bacillus anthracis'' (the cause of anthrax). ''Bacilli'' are almost exclusively gram-positive bacteria. The name ''Bacillus'', capitalized and italicized, refers to a specific genus of bacteria. The name Bacilli, capitalized but not italicized, can also refer to a less specific taxonomic group of bacteria that includes two orders, one of which contains the genus ''Bacillus''. When the word is formatted with lowercase and not italicized, 'bacillus', it will most likely be referring to shape and not to the genus at all. Ambiguity Several related concepts make use of similar words, and the ambiguity can create considerable confusion. The term "''Bacillus''" (capitalized and italicized) is also the name of a genus (''Bacillus anthracis'') that, among many other genera, falls within the class Bacilli. The word "bacillus" (or its plur ...
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Bacillales
The Bacillales are an order of Gram-positive bacteria, placed within the Bacillota. Representative genera include ''Bacillus'', ''Listeria'' and ''Staphylococcus''. See also * List of bacteria genera * List of bacterial orders This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) and the phylogeny is based on 16S ... References Gram-positive bacteria Bacilli {{bacilli-stub ...
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Planococcaceae
The ''Caryophanaceae'' is a family of Gram-positive bacteria. In 2020, the now defunct family '' Planococcaceae'' was merged into ''Caryophanaceae'' to rectify a nomenclature anomaly. The type genus of this family is '' Caryophanon.'' The family ''Planococcacae'' was validly published in 1949, however it contained within it another family level taxonomic rank, the family ''Caryophanaceae,'' which was validly published in 1939. According to the International Code of Nomenclature of Prokaryotes (ICNP), the name ''Caryophanacaeae'' has higher priority than ''Planococcaceae'' because of its earlier publication. Therefore, the emended family retained the name ''Caryophanaceae''. The name ''Caryophanaceae'' is derived from the Latin term ''Caryophanon'', referring the type genus of the family and the suffix "-aceae", an ending used to denote a family. Together, ''Caryophanaceae'' refers to a family whose nomenclatural type is the genus ''Caryophanon''. Biochemical Characteristic ...
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Ureibacillus
''Ureibacillus'' is a genus of gram-negative bacteria within the largely gram-positive Bacillota. ''Ureibacilli'' are motile and form spherical endospores. The type species of the genus is ''Ureibacillus thermosphaericus''. History The genus ''Ureibacillus'' was split from the genus '' Bacillus'' in 2001 to encompass ''Bacillus thermosphaericus'' (now ''Ureibacillus thermosphaericus'') as well as several newly discovered similar strains of bacteria. In 2020, multiple ''Lysinibacillus'' species were transferred into ''Ureibacillus'' based on branching patterns in various phylogenetic trees constructed based on conserved genome sequences, indicating their phylogenetic relatedness. The family ''Caryophanaceae The ''Caryophanaceae'' is a family of Gram-positive bacteria. In 2020, the now defunct family ''Planococcaceae'' was merged into ''Caryophanaceae'' to rectify a nomenclature anomaly. The type genus of this family is ''Caryophanon.'' The family ' ...'' encompassed man ...
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LPSN
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes The International Code of Nomenclature of Prokaryotes (ICNP) formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC) governs the scientific names for Bacteria and Archaea.P. H. A. Sneath, 2003. A short hist .... The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service. References External links List of Prokaryotic names with Standing in Nomenclature
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Gram-positive
In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. Gram-positive bacteria take up the crystal violet stain used in the test, and then appear to be purple-coloured when seen through an optical microscope. This is because the thick peptidoglycan layer in the bacterial cell wall retains the stain after it is washed away from the rest of the sample, in the decolorization stage of the test. Conversely, gram-negative bacteria cannot retain the violet stain after the decolorization step; alcohol used in this stage degrades the outer membrane of gram-negative cells, making the cell wall more porous and incapable of retaining the crystal violet stain. Their peptidoglycan layer is much thinner and sandwiched between an inner cell membrane and a bacterial outer membrane, causing them to take up the counterstain (saf ...
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Rod-shaped
A bacillus (), also called a bacilliform bacterium or often just a rod (when the context makes the sense clear), is a rod-shaped bacterium or archaeon. Bacilli are found in many different taxonomic groups of bacteria. However, the name ''Bacillus'', capitalized and italicized, refers to a specific genus of bacteria. The name Bacilli, capitalized but not italicized, can also refer to a less specific taxonomic group of bacteria that includes two orders, one of which contains the genus ''Bacillus''. When the word is formatted with lowercase and not italicized, 'bacillus', it will most likely be referring to shape and not to the genus at all. Bacilliform bacteria are also often simply called rods when the bacteriologic context is clear. Bacilli usually divide in the same plane and are solitary, but can combine to form diplobacilli, streptobacilli, and palisades. * Diplobacilli: Two bacilli arranged side by side with each other. * Streptobacilli: Bacilli arranged in chains. * Coccobac ...
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Thermophilic
A thermophile is an organism—a type of extremophile—that thrives at relatively high temperatures, between . Many thermophiles are archaea, though they can be bacteria or fungi. Thermophilic eubacteria are suggested to have been among the earliest bacteria. Thermophiles are found in various geothermally heated regions of the Earth, such as hot springs like those in Yellowstone National Park (see image) and deep sea hydrothermal vents, as well as decaying plant matter, such as peat bogs and compost. Thermophiles can survive at high temperatures, whereas other bacteria or archaea would be damaged and sometimes killed if exposed to the same temperatures. The enzymes in thermophiles function at high temperatures. Some of these enzymes are used in molecular biology, for example the ''Taq'' polymerase used in PCR. "Thermophile" is derived from the el, θερμότητα (''thermotita''), meaning heat, and el, φίλια (''philia''), love. Classification Thermophiles can be c ...
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Ureibacillus
''Ureibacillus'' is a genus of gram-negative bacteria within the largely gram-positive Bacillota. ''Ureibacilli'' are motile and form spherical endospores. The type species of the genus is '' Ureibacillus thermosphaericus''. History The genus ''Ureibacillus'' was split from the genus ''Bacillus'' in 2001 to encompass ''Bacillus thermosphaericus'' (now ''Ureibacillus thermosphaericus'') as well as several newly discovered similar strains of bacteria. In 2020, multiple ''Lysinibacillus'' species were transferred into ''Ureibacillus'' based on branching patterns in various phylogenetic trees constructed based on conserved genome sequences, indicating their phylogenetic relatedness. The family ''Caryophanaceae'' encompassed many branching anomalies such as this one, partially due to the reliance on 16S rRNA sequences as a method for classification, which is known to have low resolution power and give differing results depending on the algorithm used. Analysis of genome sequences ...
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Compost
Compost is a mixture of ingredients used as plant fertilizer and to improve soil's physical, chemical and biological properties. It is commonly prepared by decomposing plant, food waste, recycling organic materials and manure. The resulting mixture is rich in plant nutrients and beneficial organisms, such as bacteria, protozoa, nematodes and fungi. Compost improves soil fertility in gardens, landscaping, horticulture, urban agriculture, and organic farming, reducing dependency on commercial chemical fertilizers. The benefits of compost include providing nutrients to crops as fertilizer, acting as a soil conditioner, increasing the humus or humic acid contents of the soil, and introducing beneficial microbes that help to suppress pathogens in the soil and reduce soil-borne diseases. At the simplest level, composting requires gathering a mix of 'greens' (green waste) and 'browns' (brown waste). Greens are materials rich in nitrogen such as leaves, grass, and food scraps. Br ...
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