Thermomonosporaceae
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Thermomonosporaceae
''Thermomonosporaceae'' represents a Family of bacteria that share similar genotypic and phenotypic characteristics. The Family ''Thermomonosporaceae'' includes aerobic, Gram-positive, non-acid-fast, chemo-organotrophic Actinomycetota. They produce a branched substrate mycelium bearing aerial hyphae that undergo differentiation into single or short chains of arthrospores. All species of ''Thermomonosporaceae'' share the same cell wall A cell wall is a structural layer surrounding some types of cells, just outside the cell membrane. It can be tough, flexible, and sometimes rigid. It provides the cell with both structural support and protection, and also acts as a filtering mech ... type (type III; meso-diaminopimelic acid), a similar menaquinone profile in which MK-9(H6)is predominant, and fatty acid profile type 3a. The presence of the diagnostic sugar madurose is variable, but can be found in most species of this family. The polar lipid profiles are characterized as phospholip ...
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Actinomadura
The genus ''Actinomadura'' is one of four genera of Actinomycetota that belong to the family Thermomonosporaceae. It contains aerobic, Gram-positive, non-acid-fast, non-motile, chemo-organotrophic actinomycetes that produce well-developed, non-fragmenting vegetative mycelia and aerial hyphae that differentiate into surface-ornamented spore chains. These chains are of various lengths and can be straight, hooked or spiral. The genus currently comprises over 70 species with validly published names with standing in nomenclature, although the species status of some strains remains uncertain, and further comparative studies are needed. Members of the genus are not characterized chemotaxonomy, chemotaxonomically by type III/B cell walls (meso-diaminopimelic acid and madurose are present) with peptidoglycan structures of the acetyl type. The predominant menaquinone types are MK-9(H4), MK-9(H6) and MK-9(H8). The phospholipid pattern is PI (diphosphatidylglycerol and phosphatidylinositol ...
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Streptosporangiales
The ''Streptosporangiales'' are an order of bacteria. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature ... (LPSN). The phylogeny is based on whole-genome analysis. Notes References Actinomycetota {{actinobacteria-stub ...
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Actinoallomurus
''Actinoallomurus'' is a genus in the phylum Actinomycetota (Bacteria). Etymology The name ''Actinoallomurus'' derives from: Greek noun ''actis'' ', ray, used to refer to actinomycetes; Greek adjective ''allos'', different; Latin masculine gender noun ''murus'', wall; New Latin masculine gender noun ''Actinoallomurus'', actinomycetes with a different wall. Species The genus contains 11 species. ''Actinoallomurus spadix'' was previously known as '' Actinomadura spadix'' and with the exception of '' Actinoallomurus oryzae'' and '' Actinoallomurus acaciae'', the rest were described in 2009 ('' Actinoallomurus amamiensis'', '' Actinoallomurus caesius'', '' Actinoallomurus coprocola'', '' Actinoallomurus fulvus'', '' Actinoallomurus iriomotensis'', '' Actinoallomurus luridus'', '' Actinoallomurus purpureus'' and '' Actinoallomurus yoronensis'')TAMURA (T.), ISHIDA (Y.), NOZAWA (Y.), OTOGURO (M.) and SUZUKI (K.): Transfer of Actinomadura spadix Nonomura and Ohara 1971 to Actinoallom ...
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Actinocorallia
''Actinocorallia'' is a genus in the phylum Actinomycetota (Bacteria). Etymology The name ''Actinocorallia'' derives from: Greek noun ()'', a beam; Latin noun ''corallium'', coral; New Latin feminine gender noun ''Actinocorallia'', meaning an actinomycete microorganism that forms sporophores resembling coral. Species The genus contains 7 species (including basonyms and synonyms), namely * '' A. aurantiaca'' ( (Lavrova and Preobrazhenskaya 1975) Zhang ''et al''. 2001; New Latin feminine gender adjective ''aurantiaca'', orange-coloured, referring to the gold-colored substrate mycelium.), was formerly known as '' Actinomadura aurantiaca'' * '' A. aurea'' ( Tamura ''et al''. 2007; Latin feminine gender adjective ''aurea'', golden.), formerly known as "Sarraceniospora aurea" * '' A. cavernae'' ( Lee 2006; Latin genitive case noun ''cavernae'', of a cavern), was isolated from a cave in Jeju, Korea * '' A. glomerata'' ( (Itoh ''et al''. 1996) Zhang ''et al''. 2001; Latin feminine ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Phenotype
In genetics, the phenotype () is the set of observable characteristics or traits of an organism. The term covers the organism's morphology or physical form and structure, its developmental processes, its biochemical and physiological properties, its behavior, and the products of behavior. An organism's phenotype results from two basic factors: the expression of an organism's genetic code, or its genotype, and the influence of environmental factors. Both factors may interact, further affecting phenotype. When two or more clearly different phenotypes exist in the same population of a species, the species is called polymorphic. A well-documented example of polymorphism is Labrador Retriever coloring; while the coat color depends on many genes, it is clearly seen in the environment as yellow, black, and brown. Richard Dawkins in 1978 and then again in his 1982 book ''The Extended Phenotype'' suggested that one can regard bird nests and other built structures such as cad ...
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Cell Wall
A cell wall is a structural layer surrounding some types of cells, just outside the cell membrane. It can be tough, flexible, and sometimes rigid. It provides the cell with both structural support and protection, and also acts as a filtering mechanism. Cell walls are absent in many eukaryotes, including animals, but are present in some other ones like fungi, algae and plants, and in most prokaryotes (except mollicute bacteria). A major function is to act as pressure vessels, preventing over-expansion of the cell when water enters. The composition of cell walls varies between taxonomic group and species and may depend on cell type and developmental stage. The primary cell wall of land plants is composed of the polysaccharides cellulose, hemicelluloses and pectin. Often, other polymers such as lignin, suberin or cutin are anchored to or embedded in plant cell walls. Algae possess cell walls made of glycoproteins and polysaccharides such as carrageenan and agar that are absent ...
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Spore
In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, fungi and protozoa. Bacterial spores are not part of a sexual cycle, but are resistant structures used for survival under unfavourable conditions. Myxozoan spores release amoeboid infectious germs ("amoebulae") into their hosts for parasitic infection, but also reproduce within the hosts through the pairing of two nuclei within the plasmodium, which develops from the amoebula. In plants, spores are usually haploid and unicellular and are produced by meiosis in the sporangium of a diploid sporophyte. Under favourable conditions the spore can develop into a new organism using mitotic division, producing a multicellular gametophyte, which eventually goes on to produce gametes. Two gametes fuse to form a zygote which develops into a new s ...
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Hyphae
A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium. Structure A hypha consists of one or more cells surrounded by a tubular cell wall. In most fungi, hyphae are divided into cells by internal cross-walls called "septa" (singular septum). Septa are usually perforated by pores large enough for ribosomes, mitochondria, and sometimes nuclei to flow between cells. The major structural polymer in fungal cell walls is typically chitin, in contrast to plants and oomycetes that have cellulosic cell walls. Some fungi have aseptate hyphae, meaning their hyphae are not partitioned by septa. Hyphae have an average diameter of 4–6 µm. Growth Hyphae grow at their tips. During tip growth, cell walls are extended by the external assembly and polymerization of cell wall components, and the internal production of new cell membrane. ...
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Mycelium
Mycelium (plural mycelia) is a root-like structure of a fungus consisting of a mass of branching, thread-like hyphae. Fungal colonies composed of mycelium are found in and on soil and many other substrate (biology), substrates. A typical single spore germinates into a Monokaryon, monokaryotic mycelium, which cannot reproduce sexually; when two compatible monokaryotic mycelia join and form a dikaryotic mycelium, that mycelium may form sporocarp (fungi), fruiting bodies such as mushrooms. A mycelium may be minute, forming a colony that is too small to see, or may grow to span thousands of acres as in ''Armillaria''. Through the mycelium, a fungus absorbs nutrients from its environment. It does this in a two-stage process. First, the hyphae secrete enzymes onto or into the food source, which break down biopolymers, biological polymers into smaller units such as monomers. These monomers are then absorbed into the mycelium by facilitated diffusion and active transport. Mycelia are v ...
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Genotype
The genotype of an organism is its complete set of genetic material. Genotype can also be used to refer to the alleles or variants an individual carries in a particular gene or genetic location. The number of alleles an individual can have in a specific gene depends on the number of copies of each chromosome found in that species, also referred to as ploidy. In diploid species like humans, two full sets of chromosomes are present, meaning each individual has two alleles for any given gene. If both alleles are the same, the genotype is referred to as homozygous. If the alleles are different, the genotype is referred to as heterozygous. Genotype contributes to phenotype, the observable traits and characteristics in an individual or organism. The degree to which genotype affects phenotype depends on the trait. For example, the petal color in a pea plant is exclusively determined by genotype. The petals can be purple or white depending on the alleles present in the pea plant. Howev ...
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