Siamese Crocodiles
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Siamese Crocodiles
The Siamese crocodile (''Crocodylus siamensis'') is a medium-sized freshwater crocodile native to Indonesia (Borneo and possibly Java), Brunei, East Malaysia, Laos, Cambodia, Myanmar, Thailand and Vietnam. The species is critically endangered and already extirpated from many regions. Its other common names include Siamese freshwater crocodile, Singapore small-grain, and soft-belly. Phylogeny Below is a cladogram based on a 2018 tip dating study by Lee & Yates simultaneously using morphological, molecular ( DNA sequencing), and stratigraphic (fossil age) data, as revised by the 2021 Hekkala ''et al.'' paleogenomics study using DNA extracted from the extinct '' Voay''. Characteristics The Siamese crocodile is a medium-sized, freshwater crocodilian, with a relatively broad, smooth snout and an elevated, bony crest behind each eye. Overall, it is olive-green, with some variation to dark-green. Young individuals measure and weigh , growing to a length of and a weight of as ...
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Pleistocene
The Pleistocene ( , often referred to as the ''Ice age'') is the geological epoch that lasted from about 2,580,000 to 11,700 years ago, spanning the Earth's most recent period of repeated glaciations. Before a change was finally confirmed in 2009 by the International Union of Geological Sciences, the cutoff of the Pleistocene and the preceding Pliocene was regarded as being 1.806 million years Before Present (BP). Publications from earlier years may use either definition of the period. The end of the Pleistocene corresponds with the end of the last glacial period and also with the end of the Paleolithic age used in archaeology. The name is a combination of Ancient Greek grc, label=none, πλεῖστος, pleīstos, most and grc, label=none, καινός, kainós (latinized as ), 'new'. At the end of the preceding Pliocene, the previously isolated North and South American continents were joined by the Isthmus of Panama, causing a faunal interchange between the two reg ...
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Local Extinction
Local extinction, also known as extirpation, refers to a species (or other taxon) of plant or animal that ceases to exist in a chosen geographic area of study, though it still exists elsewhere. Local extinctions are contrasted with global extinctions. Local extinctions mark a change in the ecology of an area. In recent times, local extinction has sometimes been followed by a replacement of the species taken from other locations; wolf reintroduction is an example of this. The term "local extinction" is highly vernacular. The more proper biological term is ''extirpation''. Discussion Glaciation can lead to local extinction. This was the case during the Pleistocene glaciation event in North America. During this period, most of the native North American species of earthworm were killed in places covered by glaciation. This left them open for colonization by European earthworms brought over in soil from Europe. Species naturally become extirpated from islands over time. The numb ...
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Crocodylus Anthropophagus
''Crocodylus anthropophagus'' is an extinct species of crocodile from the Pleistocene of Tanzania. It lived 1.84 million years ago. It was a large-sized predator reaching a length of . Etymology ''Crocodylus anthropophagus'' was first named by Christopher A. Brochu, Jackson Njau, Robert J. Blumenschine and Llewellyn D. Densmore in 2010. The specific name ''anthropophagus'' is from Greek word "''anthropos''" that means "human" and Greek word "'" that means "eater", in reference to the evidence that this animal included hominids in its diet. Taxonomy The holotype specimen, NNHM-1001, comprises a skull and partial skeleton. All specimens were discovered in Olduvai Gorge, Tanzania, in two different rock formations dating to 1.845 and 1.839 million years ago in the Plio-Pleistocene. The cladogram below is from a 2021 study based on the finding of a new ''C. anthropophagus'' partial cranium. Description The skeleton is consistent with living representatives of the genus. The ...
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Crocodylus
''Crocodylus'' is a genus of true crocodiles in the family Crocodylidae. Taxonomy The generic name, ''Crocodylus'', was proposed by Josephus Nicolaus Laurenti in 1768. ''Crocodylus'' contains 13–14 extant (living) species and 5 extinct species. There are additional extinct species attributed to the genus ''Crocodylus'' that studies have shown no longer belong, although they have not yet been reassigned to new genera. Extant species The 13–14 living species are: Fossils ''Crocodylus'' also includes five extinct species: * † ''Crocodylus anthropophagus'' is an extinct crocodile from Plio-Pleistocene of Tanzania. * † '' Crocodylus checchiai'' is an extinct crocodile from Late Miocene of Kenya. * † '' Crocodylus falconensis'' is an extinct crocodile from Early Pliocene of Venezuela. * † '' Crocodylus palaeindicus'' is an extinct crocodile the Miocene to the Pleistocene of southern Asia. * † '' Crocodylus thorbjarnarsoni'' is an extinct crocodile from Plio-Pleistoc ...
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Crocodylinae
Crocodylinae is a subfamily of true crocodiles within the family Crocodylidae, and is the sister taxon to Osteolaeminae ( dwarf crocodiles and slender-snouted crocodiles). Taxonomy Crocodylinae was cladistically defined by Christopher Brochu in 1999 as ''Crocodylus niloticus'' (the Nile crocodile) and all crocodylians more closely related to it than to ''Osteolaemus tetraspis'' (the Dwarf crocodile). This is a stem-based definition, and is the sister taxon to Osteolaeminae. Crocodylinae contains the extant genus '' Crocodylus''. It is disputed as to whether is also includes '' Mecistops'' (slender-snouted crocodiles), or the extinct genus Voay. Phylogeny Some morphological studies have recovered '' Mecistops'' as a basal member of Crocodylinae, more closely related to '' Crocodylus'' than to ''Osteolaemus'' and the other members of Osteolaeminae, as shown in the cladogram below. The below cladogram is based on a 2021 study using paleogenomics that extracted DNA ...
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Voay
''Voay'' is an extinct genus of crocodile from Madagascar that lived during the Late Pleistocene to Holocene, containing only one species, ''V. robustus''. Numerous subfossils have been found, including complete skulls, noted for their distinctive pair of horns on the posterior, as well as vertebrae and osteoderms from such places as Ambolisatra and Antsirabe. The genus is thought to have become extinct relatively recently. It has been suggested to have disappeared in the extinction event that wiped out much of the endemic megafauna on Madagascar, such as the elephant bird and Malagasy hippo, following the arrival of humans to Madagascar around 2000 years ago. Its name comes from the Malagasy word for crocodile. Description One unusual feature of ''V. robustus'' that distinguishes it from other crocodilians is the presence of prominent "horns" extending from the posterior portion of the skull. They are actually the posterolaterally extended corners of the squamosal bone. Oth ...
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Paleogenomics
Paleogenomics is a field of science based on the reconstruction and analysis of genomic information in extinct species. Improved methods for the extraction of ancient DNA (aDNA) from museum artifacts, ice cores, archeological or paleontological sites, and next-generation sequencing technologies have spurred this field. It is now possible to detect genetic drift, ancient population migration and interrelationships, the evolutionary history of extinct plant, animal and ''Homo'' species, and identification of phenotypic features across geographic regions. Scientists can also use paleogenomics to compare ancient ancestors against modern-day humans. The rising importance of paleogenomics is evident from the fact that the 2022 Nobel Prize in physiology or medicine was awarded to a Swedish geneticist Svante Pääbo 955- who worked on paleogenomics. Background Initially, aDNA sequencing involved cloning small fragments into bacteria, which proceeded with low efficiency due to the oxidati ...
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Proceedings Of The Royal Society B
''Proceedings of the Royal Society'' is the main research journal of the Royal Society. The journal began in 1831 and was split into two series in 1905: * Series A: for papers in physical sciences and mathematics. * Series B: for papers in life sciences. Many landmark scientific discoveries are published in the Proceedings, making it one of the most historically significant science journals. The journal contains several articles written by the most celebrated names in science, such as Paul Dirac, Werner Heisenberg, Ernest Rutherford, Erwin Schrödinger, William Lawrence Bragg, Lord Kelvin, J.J. Thomson, James Clerk Maxwell, Dorothy Hodgkin and Stephen Hawking. In 2004, the Royal Society began '' The Journal of the Royal Society Interface'' for papers at the interface of physical sciences and life sciences. History The journal began in 1831 as a compilation of abstracts of papers in the ''Philosophical Transactions of the Royal Society'', the older Royal Society publicatio ...
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Fossil
A fossil (from Classical Latin , ) is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserved in amber, hair, petrified wood and DNA remnants. The totality of fossils is known as the ''fossil record''. Paleontology is the study of fossils: their age, method of formation, and evolutionary significance. Specimens are usually considered to be fossils if they are over 10,000 years old. The oldest fossils are around 3.48 billion years old to 4.1 billion years old. Early edition, published online before print. The observation in the 19th century that certain fossils were associated with certain rock strata led to the recognition of a geological timescale and the relative ages of different fossils. The development of radiometric dating techniques in the early 20th century allowed scientists to quantitatively measure the ...
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Stratigraphic
Stratigraphy is a branch of geology concerned with the study of rock layers (strata) and layering (stratification). It is primarily used in the study of sedimentary and layered volcanic rocks. Stratigraphy has three related subfields: lithostratigraphy (lithologic stratigraphy), biostratigraphy (biologic stratigraphy), and chronostratigraphy (stratigraphy by age). Historical development Catholic priest Nicholas Steno established the theoretical basis for stratigraphy when he introduced the law of superposition, the principle of original horizontality and the principle of lateral continuity in a 1669 work on the fossilization of organic remains in layers of sediment. The first practical large-scale application of stratigraphy was by William Smith in the 1790s and early 19th century. Known as the "Father of English geology", Smith recognized the significance of strata or rock layering and the importance of fossil markers for correlating strata; he created the first geologic ...
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DNA Sequencing
DNA sequencing is the process of determining the nucleic acid sequence – the order of nucleotides in DNA. It includes any method or technology that is used to determine the order of the four bases: adenine, guanine, cytosine, and thymine. The advent of rapid DNA sequencing methods has greatly accelerated biological and medical research and discovery. Knowledge of DNA sequences has become indispensable for basic biological research, DNA Genographic Projects and in numerous applied fields such as medical diagnosis, biotechnology, forensic biology, virology and biological systematics. Comparing healthy and mutated DNA sequences can diagnose different diseases including various cancers, characterize antibody repertoire, and can be used to guide patient treatment. Having a quick way to sequence DNA allows for faster and more individualized medical care to be administered, and for more organisms to be identified and cataloged. The rapid speed of sequencing attained with modern ...
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Morphology (biology)
Morphology is a branch of biology dealing with the study of the form and structure of organisms and their specific structural features. This includes aspects of the outward appearance ( shape, structure, colour, pattern, size), i.e. external morphology (or eidonomy), as well as the form and structure of the internal parts like bones and organs, i.e. internal morphology (or anatomy). This is in contrast to physiology, which deals primarily with function. Morphology is a branch of life science dealing with the study of gross structure of an organism or taxon and its component parts. History The etymology of the word "morphology" is from the Ancient Greek (), meaning "form", and (), meaning "word, study, research". While the concept of form in biology, opposed to function, dates back to Aristotle (see Aristotle's biology), the field of morphology was developed by Johann Wolfgang von Goethe (1790) and independently by the German anatomist and physiologist Karl Friedr ...
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