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Sulfur-reducing Bacteria
Sulfur-reducing bacteria are microorganisms able to reduce elemental sulfur (S0) to hydrogen sulfide (H2S). These microbes use inorganic sulfur compounds as electron acceptors to sustain several activities such as respiration, conserving energy and growth, in absence of oxygen. The final product or these processes, sulfide, has a considerable influence on the chemistry of the environment and, in addition, is used as electron donor for a large variety of microbial metabolisms. Several types of bacteria and many non-methanogenic archaea can reduce sulfur. Microbial sulfur reduction was already shown in early studies, which highlighted the first proof of S0 reduction in a vibrioid bacterium from mud, with sulfur as electron acceptor and as electron donor. The first pure cultured species of sulfur-reducing bacteria, ''Desulfuromonas acetoxidans'', was discovered in 1976 and described by Pfennig Norbert and Biebel Hanno as an anaerobic sulfur-reducing and acetate-oxidizing bacterium, no ...
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Redox Reaction
Redox (reduction–oxidation, , ) is a type of chemical reaction in which the oxidation states of substrate change. Oxidation is the loss of electrons or an increase in the oxidation state, while reduction is the gain of electrons or a decrease in the oxidation state. There are two classes of redox reactions: * ''Electron-transfer'' – Only one (usually) electron flows from the reducing agent to the oxidant. This type of redox reaction is often discussed in terms of redox couples and electrode potentials. * ''Atom transfer'' – An atom transfers from one substrate to another. For example, in the rusting of iron, the oxidation state of iron atoms increases as the iron converts to an oxide, and simultaneously the oxidation state of oxygen decreases as it accepts electrons released by the iron. Although oxidation reactions are commonly associated with the formation of oxides, other chemical species can serve the same function. In hydrogenation, C=C (and other) bonds ar ...
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Thermodesulfobacteriota
The Thermodesulfobacteriota are a phylum of thermophilic sulfate-reducing bacteria. A pathogenic intracellular thermodesulfobacteriote has recently been identified. Phylogeny The phylogeny is based on phylogenomic analysis: See also * List of bacterial orders * List of bacteria genera This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However many taxonomic names are ... References {{Taxonbar, from=Q20643853 Bergey's volume 1 Bacteria phyla ...
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Wolinella
The genus ''Wolinella'' is a member of the Campylobacterales order of Bacteria. The order Campylobacterales includes human pathogens such as ''Helicobacter pylori'' and ''Campylobacter jejuni''. Strains The only publicly available strain of ''Wolinella'' is '' Wolinella succinogenes'' DSM 1740 (ATCC 29543). The original isolation of this organism was done by M. J. Wolin, E. A. Wolin and N. J. Jacobs at the University of Illinois. This original isolation was done from bovine rumen fluid and was somewhat serendipitous as the researchers were intending to isolate methanogenic organisms. This bacterium was originally classified as ''Vibrio succinogenes'', but was reclassified in 1981 to ''Wolinella succinogenes'' by A. C. R. Tanner ''et al''. Strains of ''Wolinella'' have been isolated from feline and canine oral cavities. Only one strain is currently published with ''Candidatus'' status: ''Candidatus Wolinella africanus''. This strain was isolated from the upper digestive tracts of ...
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Lithotroph
Lithotrophs are a diverse group of organisms using an inorganic substrate (usually of mineral origin) to obtain reducing equivalents for use in biosynthesis (e.g., carbon dioxide fixation) or energy conservation (i.e., ATP production) via aerobic or anaerobic respiration. While lithotrophs in the broader sense include photolithotrophs like plants, chemolithotrophs are exclusively microorganisms; no known macrofauna possesses the ability to use inorganic compounds as electron sources. Macrofauna and lithotrophs can form symbiotic relationships, in which case the lithotrophs are called "prokaryotic symbionts". An example of this is chemolithotrophic bacteria in giant tube worms or plastids, which are organelles within plant cells that may have evolved from photolithotrophic cyanobacteria-like organisms. Chemolithotrophs belong to the domains Bacteria and Archaea. The term "lithotroph" was created from the Greek terms 'lithos' (rock) and 'troph' (consumer), meaning "eaters of rock" ...
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Phylogenetic Tree
A phylogenetic tree (also phylogeny or evolutionary tree Felsenstein J. (2004). ''Inferring Phylogenies'' Sinauer Associates: Sunderland, MA.) is a branching diagram or a tree showing the evolutionary relationships among various biological species or other entities based upon similarities and differences in their physical or genetic characteristics. All life on Earth is part of a single phylogenetic tree, indicating common ancestry. In a ''rooted'' phylogenetic tree, each node with descendants represents the inferred most recent common ancestor of those descendants, and the edge lengths in some trees may be interpreted as time estimates. Each node is called a taxonomic unit. Internal nodes are generally called hypothetical taxonomic units, as they cannot be directly observed. Trees are useful in fields of biology such as bioinformatics, systematics, and phylogenetics. ''Unrooted'' trees illustrate only the relatedness of the leaf nodes and do not require the ancestral root to b ...
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Metabolism
Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cellular processes; the conversion of food to building blocks for proteins, lipids, nucleic acids, and some carbohydrates; and the elimination of metabolic wastes. These enzyme-catalyzed reactions allow organisms to grow and reproduce, maintain their structures, and respond to their environments. The word metabolism can also refer to the sum of all chemical reactions that occur in living organisms, including digestion and the transportation of substances into and between different cells, in which case the above described set of reactions within the cells is called intermediary (or intermediate) metabolism. Metabolic reactions may be categorized as ''catabolic'' – the ''breaking down'' of compounds (for example, of glucose to pyruvate by ce ...
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Chrysiogenota
Chrysiogenaceae is a family of bacteria. Phylogeny The phylogeny is based on 16S rRNA based LTP LTP may refer to: Biology and medicine * Lateral tibial plateau, part of a leg bone * Lipid transfer proteins, proteins found in plant tissues * Long-term potentiation (neurophysiology), a long-lasting enhancement in signal transmission between ..._12_2021 See also * List of bacterial orders * List of bacteria genera References Bacteria families Chrysiogenetes {{Bacteria-stub ...
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Spirochaetota
A spirochaete () or spirochete is a member of the phylum Spirochaetota (), (synonym Spirochaetes) which contains distinctive diderm (double-membrane) gram-negative bacteria, most of which have long, helically coiled (corkscrew-shaped or spiraled, hence the name) cells. Spirochaetes are chemoheterotrophic in nature, with lengths between 3 and 500 μm and diameters around 0.09 to at least 3 μm. Spirochaetes are distinguished from other bacterial phyla by the location of their flagella, called endoflagella which are sometimes called ''axial filaments''. Endoflagella are anchored at each end (pole) of the bacterium within the periplasmic space (between the inner and outer membranes) where they project backwards to extend the length of the cell. These cause a twisting motion which allows the spirochaete to move about. When reproducing, a spirochaete will undergo asexual transverse binary fission. Most spirochaetes are free-living and anaerobic, but there are nume ...
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Deferribacterota
The Deferribacteraceae are a family of gram-negative bacteria which make energy by anaerobic respiration.Huber, H., and Stetter, K.O. "Family I. ''Deferribacteraceae'' fam. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). pp. 465-466. Description Deferribacteraceae are rod-shaped, although the rods may be straight or bent. They are gram-negative. Deferribacteraceae perform anaerobic respiration using iron, manganese, or nitrate. They can also produce energy by fermentation. The type genus of the family is '' Deferribacter''. Phylogeny Taxonomy The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LSPN) See the NCBIbr>webpage on DeferribacteresData extracted from the * Phylum Deferribacterota Garrity and Holt 2021 ** Class Deferribacteres Huber & Stetter 2002 ** ...
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Synergistota
The Synergistota is a phylum of anaerobic bacteria that show Gram-negative staining and have rod/vibrioid cell shape. Although Synergistota have a diderm cell envelope,Gupta, R. S. (2011) Origin of Diderm (Gram-negative) Bacteria: Antibiotic Selection Pressure Rather than Endosymbiosis Likely led to the Evolution of Bacterial Cells with Two Membranes. Antonie van Leeuwenhoek. 100: 171–182 the genes for various proteins involved in lipopolysaccharides biosynthesis have not yet been detected in Synergistota, indicating that they may have an atypical outer cell envelope. The Synergistota inhabit a majority of anaerobic environments including animal gastrointestinal tracts, soil, oil wells, and wastewater treatment plants and they are also present in sites of human diseases such as cysts, abscesses, and areas of periodontal disease.Vartoukian, S.R., Palmer, R.M., and Wade, W.G. (2007). The division "Synergistes". Anaerobe. 13, 99–106. Due to their presence at illness related sites ...
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Aquificota
The ''Aquificota'' phylum is a diverse collection of bacteria that live in harsh environmental settings. The name ''Aquificota'' was given to this phylum based on an early genus identified within this group, ''Aquifex'' (“water maker”), which is able to produce water by oxidizing hydrogen. They have been found in springs, pools, and oceans. They are autotrophs, and are the primary carbon fixers in their environments. These bacteria are Gram-negative, non-spore-forming rods. They are true bacteria (domain Bacteria) as opposed to the other inhabitants of extreme environments, the Archaea. Taxonomy The ''Aquificota'' currently contain 15 genera and 42 validly published species. The phylum comprises a single class and two orders. Aquificales consists of the families Aquificaceae and Hydrogenothermaceae, while the Desulfurobacteriaceae are the only family within the Desulfobacteriales. ''Thermosulfidibacter takaii'' is not assigned to a family within the phylum based on its phylog ...
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Ammonifex
''Ammonifex'' is a Gram-negative, extremely thermophilic, strictly anaerobic and motile genus of bacteria from the family of Thermoanaerobacteraceae The Thermoanaerobacteraceae is a highly polyphyletic family of bacteria placed within the class clostridia. Originally placed within the highly polyphyletic class Clostridia and order Thermoanaerobacterales, according to the NCBI and LPSN, it is .... References Further reading * Thermoanaerobacterales Bacteria genera Thermophiles Anaerobes {{Firmicutes-stub ...
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