Rulkov Map
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Rulkov Map
The Rulkov map is a two-dimensional iterated map used to model a biological neuron. It was proposed by Nikolai F. Rulkov in 2001."Modelling of spiking-bursting neural behavior using two dimensional map/ref> The use of this map to study neural networks has computational advantages because the map is easier to iterate than a continuous dynamical system. This saves memory and simplifies the computation of large neural networks. The model The Rulkov map, with n as discrete time, can be represented by the following dynamical equations: :x_=\frac+y_n :y_=y_n-\mu(x_-\sigma) where x represents the membrane potential of the neuron. The variable y in the model is a slow variable due to a very small value of \mu (0 < \mu << 1). Unlike variable x, variable y does not have explicit biological meaning, though some analogy to gating variables can be drawn. ...
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Iterated Map
In mathematics, an iterated function is a function (that is, a function from some set to itself) which is obtained by composing another function with itself a certain number of times. The process of repeatedly applying the same function is called iteration. In this process, starting from some initial object, the result of applying a given function is fed again in the function as input, and this process is repeated. For example on the image on the right: :with the circle‑shaped symbol of function composition. Iterated functions are objects of study in computer science, fractals, dynamical systems, mathematics and renormalization group physics. Definition The formal definition of an iterated function on a set ''X'' follows. Let be a set and be a function. Defining as the ''n''-th iterate of (a notation introduced by Hans Heinrich Bürmann and John Frederick William Herschel), where ''n'' is a non-negative integer, by: f^0 ~ \stackrel ~ \operatorname_X ...
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Neuron
A neuron, neurone, or nerve cell is an electrically excitable cell that communicates with other cells via specialized connections called synapses. The neuron is the main component of nervous tissue in all animals except sponges and placozoa. Non-animals like plants and fungi do not have nerve cells. Neurons are typically classified into three types based on their function. Sensory neurons respond to stimuli such as touch, sound, or light that affect the cells of the sensory organs, and they send signals to the spinal cord or brain. Motor neurons receive signals from the brain and spinal cord to control everything from muscle contractions to glandular output. Interneurons connect neurons to other neurons within the same region of the brain or spinal cord. When multiple neurons are connected together, they form what is called a neural circuit. A typical neuron consists of a cell body (soma), dendrites, and a single axon. The soma is a compact structure, and the axon and dend ...
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Neural Networks
A neural network is a network or circuit of biological neurons, or, in a modern sense, an artificial neural network, composed of artificial neurons or nodes. Thus, a neural network is either a biological neural network, made up of biological neurons, or an artificial neural network, used for solving artificial intelligence (AI) problems. The connections of the biological neuron are modeled in artificial neural networks as weights between nodes. A positive weight reflects an excitatory connection, while negative values mean inhibitory connections. All inputs are modified by a weight and summed. This activity is referred to as a linear combination. Finally, an activation function controls the amplitude of the output. For example, an acceptable range of output is usually between 0 and 1, or it could be −1 and 1. These artificial networks may be used for predictive modeling, adaptive control and applications where they can be trained via a dataset. Self-learning resulting from e ...
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Continuous Dynamical System
In mathematics, a dynamical system is a system in which a Function (mathematics), function describes the time dependence of a Point (geometry), point in an ambient space. Examples include the mathematical models that describe the swinging of a clock pendulum, fluid dynamics, the flow of water in a pipe, the Brownian motion, random motion of particles in the air, and population dynamics, the number of fish each springtime in a lake. The most general definition unifies several concepts in mathematics such as ordinary differential equations and ergodic theory by allowing different choices of the space and how time is measured. Time can be measured by integers, by real number, real or complex numbers or can be a more general algebraic object, losing the memory of its physical origin, and the space may be a manifold or simply a Set (mathematics), set, without the need of a Differentiability, smooth space-time structure defined on it. At any given time, a dynamical system has a State ...
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Membrane Potential
Membrane potential (also transmembrane potential or membrane voltage) is the difference in electric potential between the interior and the exterior of a biological cell. That is, there is a difference in the energy required for electric charges to move from the internal to exterior cellular environments and vice versa, as long as there is no acquisition of kinetic energy or the production of radiation. The concentration gradients of the charges directly determine this energy requirement. For the exterior of the cell, typical values of membrane potential, normally given in units of milli volts and denoted as mV, range from –80 mV to –40 mV. All animal cells are surrounded by a membrane composed of a lipid bilayer with proteins embedded in it. The membrane serves as both an insulator and a diffusion barrier to the movement of ions. Transmembrane proteins, also known as ion transporter or ion pump proteins, actively push ions across the membrane and establish concentration gradi ...
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Ion Channel
Ion channels are pore-forming membrane proteins that allow ions to pass through the channel pore. Their functions include establishing a resting membrane potential, shaping action potentials and other electrical signals by gating the flow of ions across the cell membrane, controlling the flow of ions across secretory and epithelial cells, and regulating cell volume. Ion channels are present in the membranes of all cells. Ion channels are one of the two classes of ionophoric proteins, the other being ion transporters. The study of ion channels often involves biophysics, electrophysiology, and pharmacology, while using techniques including voltage clamp, patch clamp, immunohistochemistry, X-ray crystallography, fluoroscopy, and RT-PCR. Their classification as molecules is referred to as channelomics. Basic features There are two distinctive features of ion channels that differentiate them from other types of ion transporter proteins: #The rate of ion transport through the ...
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Bursting
Bursting, or burst firing, is an extremely diverse general phenomenon of the activation patterns of neurons in the central nervous system and spinal cord where periods of rapid action potential spiking are followed by quiescent periods much longer than typical inter-spike intervals. Bursting is thought to be important in the operation of robust central pattern generators, the transmission of neural codes, and some neuropathologies such as epilepsy. The study of bursting both directly and in how it takes part in other neural phenomena has been very popular since the beginnings of cellular neuroscience and is closely tied to the fields of neural synchronization, neural coding, plasticity, and attention. Observed bursts are named by the number of discrete action potentials they are composed of: a ''doublet'' is a two-spike burst, a ''triplet'' three and a ''quadruplet'' four. Neurons that are intrinsically prone to bursting behavior are referred to as ''bursters'' and this tendency t ...
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Saddle-node Bifurcation
In the mathematical area of bifurcation theory a saddle-node bifurcation, tangential bifurcation or fold bifurcation is a local bifurcation in which two fixed points (or equilibria) of a dynamical system collide and annihilate each other. The term 'saddle-node bifurcation' is most often used in reference to continuous dynamical systems. In discrete dynamical systems, the same bifurcation is often instead called a fold bifurcation. Another name is blue sky bifurcation in reference to the sudden creation of two fixed points. If the phase space is one-dimensional, one of the equilibrium points is unstable (the saddle), while the other is stable (the node). Saddle-node bifurcations may be associated with hysteresis loops and catastrophes. Normal form A typical example of a differential equation with a saddle-node bifurcation is: :\frac=r+x^2. Here x is the state variable and r is the bifurcation parameter. *If r0 there are no equilibrium points. In fact, this is a normal fo ...
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Biological Neuron Model
Biological neuron models, also known as a spiking neuron models, are mathematical descriptions of the properties of certain cells in the nervous system that generate sharp electrical potentials across their cell membrane, roughly one millisecond in duration, called action potentials or spikes (Fig. 2). Since spikes are transmitted along the axon and synapses from the sending neuron to many other neurons, spiking neurons are considered to be a major information processing unit of the nervous system. Spiking neuron models can be divided into different categories: the most detailed mathematical models are biophysical neuron models (also called Hodgkin-Huxley models) that describe the membrane voltage as a function of the input current and the activation of ion channels. Mathematically simpler are integrate-and-fire models that describe the membrane voltage as a function of the input current and predict the spike times without a description of the biophysical processes that shape ...
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Hodgkin–Huxley Model
The Hodgkin–Huxley model, or conductance-based model, is a mathematical model that describes how action potentials in neurons are initiated and propagated. It is a set of nonlinear differential equations that approximates the electrical characteristics of excitable cells such as neurons and muscle cells. It is a continuous-time dynamical system. Alan Hodgkin and Andrew Huxley described the model in 1952 to explain the ionic mechanisms underlying the initiation and propagation of action potentials in the squid giant axon. They received the 1963 Nobel Prize in Physiology or Medicine for this work. Basic components The typical Hodgkin–Huxley model treats each component of an excitable cell as an electrical element (as shown in the figure). The lipid bilayer is represented as a capacitance (Cm). Voltage-gated ion channels are represented by electrical conductances (''g''''n'', where ''n'' is the specific ion channel) that depend on both voltage and time. Leak channels are rep ...
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FitzHugh–Nagumo Model
The FitzHugh–Nagumo model (FHN), named after Richard FitzHugh (1922–2007) who suggested the system in 1961 and J. Nagumo ''et al''. who created the equivalent circuit the following year, describes a prototype of an excitable system (e.g., a neuron). The FHN Model is an example of a relaxation oscillator because, if the external stimulus I_ exceeds a certain threshold value, the system will exhibit a characteristic excursion in phase space, before the variables v and w relax back to their rest values. This behaviour is typical for spike generations (a short, nonlinear elevation of membrane voltage v, diminished over time by a slower, linear recovery variable w) in a neuron after stimulation by an external input current. The equations for this dynamical system read : \dot=v-\frac - w + RI_ : \tau \dot = v+a-b w. The dynamics of this system can be nicely described by zapping between the left and right branch of the cubic nullcline. The FitzHugh–Nagumo model is a sim ...
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