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PSI (computational Chemistry)
Psi is an ab initio computational chemistry package originally written by the research group of Henry F. Schaefer, III (University of Georgia). Utilizing Psi, one can perform a calculation on a molecular system with various kinds of methods such as Hartree-Fock, Post-Hartree–Fock electron correlation methods, and Density functional theory. The program can compute energies, optimize molecular geometries, and compute vibrational frequencies. The major part of the program is written in C++, while Python API is also available, which allows users to perform complex computations or automate tasks easily. Psi4 is the latest release of the program package - it is open source, released as free under the GPL through GitHub. Primary development of Psi4 is currently performed by the research groups of David Sherrill (Georgia Tech), T. Daniel Crawford (Virginia Tech), Francesco Evangelista (Emory University), and Henry F. Schaefer, III (University of Georgia), with substantial contribu ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Linux
Linux ( or ) is a family of open-source Unix-like operating systems based on the Linux kernel, an operating system kernel first released on September 17, 1991, by Linus Torvalds. Linux is typically packaged as a Linux distribution, which includes the kernel and supporting system software and libraries, many of which are provided by the GNU Project. Many Linux distributions use the word "Linux" in their name, but the Free Software Foundation uses the name "GNU/Linux" to emphasize the importance of GNU software, causing some controversy. Popular Linux distributions include Debian, Fedora Linux, and Ubuntu, the latter of which itself consists of many different distributions and modifications, including Lubuntu and Xubuntu. Commercial distributions include Red Hat Enterprise Linux and SUSE Linux Enterprise. Desktop Linux distributions include a windowing system such as X11 or Wayland, and a desktop environment such as GNOME or KDE Plasma. Distributions intended for ser ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
David Sherrill
Charles David Sherrill is a professor of chemistry and computational science and engineering at Georgia Tech working in the areas of theoretical chemistry, computational quantum chemistry, and scientific computing. His research focuses on the development and application of theoretical methods for non-covalent interactions between molecules. He is the lead principal investigator of the Psi open-source quantum chemistry program. Life and education Born in Chattanooga, Tennessee (April 5, 1970), Sherrill received his S.B. in chemistry from MIT. He received his Ph.D. in 1996 from the University of Georgia, working with Professor Henry F. Schefer, III on highly correlated configuration interaction methods. He was an NSF Postdoctoral Fellow in the laboratory of Martin Head-Gordon at the University of California, Berkeley. Career In 1999, Sherrill joined the faculty of the school of chemistry and biochemistry at Georgia Tech. He joined the school of computational science and eng ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Random Phase Approximation
The random phase approximation (RPA) is an approximation method in condensed matter physics and in nuclear physics. It was first introduced by David Bohm and David Pines as an important result in a series of seminal papers of 1952 and 1953. For decades physicists had been trying to incorporate the effect of microscopic quantum mechanical interactions between electrons in the theory of matter. Bohm and Pines' RPA accounts for the weak screened Coulomb interaction and is commonly used for describing the dynamic linear electronic response of electron systems. In the RPA, electrons are assumed to respond only to the total electric potential ''V''(r) which is the sum of the external perturbing potential ''V''ext(r) and a screening potential ''V''sc(r). The external perturbing potential is assumed to oscillate at a single frequency ''ω'', so that the model yields via a self-consistent field (SCF) method a dynamic dielectric function denoted by εRPA(k, ''ω''). The contribution to the d ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Configuration Interaction
Configuration interaction (CI) is a post-Hartree–Fock linear variational method for solving the nonrelativistic Schrödinger equation within the Born–Oppenheimer approximation for a quantum chemical multi-electron system. Mathematically, ''configuration'' simply describes the linear combination of Slater determinants used for the wave function. In terms of a specification of orbital occupation (for instance, (1s)2(2s)2(2p)1...), ''interaction'' means the mixing (interaction) of different electronic configurations (states). Due to the long CPU time and large memory required for CI calculations, the method is limited to relatively small systems. In contrast to the Hartree–Fock method, in order to account for electron correlation, CI uses a variational wave function that is a linear combination of configuration state functions (CSFs) built from spin orbitals (denoted by the superscript ''SO''), : \Psi = \sum_ c_ \Phi_^ = c_0\Phi_0^ + c_1\Phi_1^ + where Ψ is ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Symmetry-adapted Perturbation Theory
Symmetry-adapted perturbation theory or SAPT is a methodology in electronic structure theory developed to describe non-covalent interactions between atoms and/or molecules. SAPT is a member of the family of methods known as energy decomposition analysis (EDA). Most EDA methods decompose a total interaction energy that is computed via a ''supermolecular'' approach, such that: \Delta E_=E_-E_-E_ where \Delta E_ is the total interaction energy obtained via subtracting isolated monomer energies E_ and E_ from the dimer energy E_. A key deficiency of the supermolecular interaction energy is that it is susceptible to basis set superposition error (BSSE). The major difference between SAPT and supermolecular EDA methods is that, as the name suggests, SAPT computes the interaction energy ''directly'' via a perturbative approach. One consequence of capturing the total interaction energy as a perturbation to the total system energy rather than using the subtractive supermolecular method outli ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Multireference Configuration Interaction
In quantum chemistry, the multireference configuration interaction (MRCI) method consists of a configuration interaction expansion of the eigenstates of the electronic molecular Hamiltonian in a set of Slater determinants which correspond to excitations of the ground state electronic configuration but also of some excited states. The Slater determinants from which the excitations are performed are called reference determinants. The higher excited determinants (also called configuration state functions (CSFs) or shortly configurations) are then chosen either by the program according to some perturbation theoretical ansatz according to a threshold provided by the user or simply by truncating excitations from these references to singly, doubly, ... excitations resulting in MRCIS, MRCISD, etc. For the ground state using more than one reference configuration means a better correlation and so a lower energy. The problem of size inconsistency of truncated CI-methods is not solved by taki ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Multi-configurational Self-consistent Field
Multi-configurational self-consistent field (MCSCF) is a method in quantum chemistry used to generate qualitatively correct reference states of molecules in cases where Hartree–Fock and density functional theory are not adequate (e.g., for molecular ground states which are quasi-degenerate with low-lying excited states or in bond-breaking situations). It uses a linear combination of configuration state functions (CSF), or configuration determinants, to approximate the exact electronic wavefunction of an atom or molecule. In an MCSCF calculation, the set of coefficients of both the CSFs or determinants and the basis functions in the molecular orbitals are varied to obtain the total electronic wavefunction with the lowest possible energy. This method can be considered a combination between configuration interaction (where the molecular orbitals are not varied but the expansion of the wave function) and Hartree–Fock (where there is only one determinant, but the molecular orbitals ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Coupled Cluster
Coupled cluster (CC) is a numerical technique used for describing many-body systems. Its most common use is as one of several post-Hartree–Fock ab initio quantum chemistry methods in the field of computational chemistry, but it is also used in nuclear physics. Coupled cluster essentially takes the basic Hartree–Fock molecular orbital method and constructs multi-electron wavefunctions using the exponential cluster operator to account for electron correlation. Some of the most accurate calculations for small to medium-sized molecules use this method. The method was initially developed by Fritz Coester and Hermann Kümmel in the 1950s for studying nuclear-physics phenomena, but became more frequently used when in 1966 Jiří Čížek (and later together with Josef Paldus) reformulated the method for electron correlation in atoms and molecules. It is now one of the most prevalent methods in quantum chemistry that includes electronic correlation. CC theory is simply the pertur ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Møller–Plesset Perturbation Theory
Møller–Plesset perturbation theory (MP) is one of several quantum chemistry post–Hartree–Fock ab initio methods in the field of computational chemistry. It improves on the Hartree–Fock method by adding electron correlation effects by means of Rayleigh–Schrödinger perturbation theory (RS-PT), usually to second (MP2), third (MP3) or fourth (MP4) order. Its main idea was published as early as 1934 by Christian Møller and Milton S. Plesset. Rayleigh–Schrödinger perturbation theory The MP perturbation theory is a special case of RS perturbation theory. In RS theory one considers an unperturbed Hamiltonian operator \hat_, to which a small (often external) perturbation \hat is added: :\hat = \hat_ + \lambda \hat. Here, ''λ'' is an arbitrary real parameter that controls the size of the perturbation. In MP theory the zeroth-order wave function is an exact eigenfunction of the Fock operator, which thus serves as the unperturbed operator. The perturbation is the ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Hartree–Fock Method
In computational physics and chemistry, the Hartree–Fock (HF) method is a method of approximation for the determination of the wave function and the energy of a quantum many-body system in a stationary state. The Hartree–Fock method often assumes that the exact ''N''-body wave function of the system can be approximated by a single Slater determinant (in the case where the particles are fermions) or by a single permanent (in the case of bosons) of ''N'' spin-orbitals. By invoking the variational method, one can derive a set of ''N''-coupled equations for the ''N'' spin orbitals. A solution of these equations yields the Hartree–Fock wave function and energy of the system. Especially in the older literature, the Hartree–Fock method is also called the self-consistent field method (SCF). In deriving what is now called the Hartree equation as an approximate solution of the Schrödinger equation, Hartree required the final field as computed from the charge distribution to be "s ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Quantum Chemistry
Quantum chemistry, also called molecular quantum mechanics, is a branch of physical chemistry focused on the application of quantum mechanics to chemical systems, particularly towards the quantum-mechanical calculation of electronic contributions to physical and chemical properties of Molecule, molecules, Material, materials, and solutions at the atomic level. These calculations include systematically applied approximations intended to make calculations computationally feasible while still capturing as much information about important contributions to the computed Wave function, wave functions as well as to observable properties such as structures, spectra, and thermodynamic properties. Quantum chemistry is also concerned with the computation of quantum effects on molecular dynamics and chemical kinetics. Chemists rely heavily on spectroscopy through which information regarding the Quantization (physics), quantization of energy on a molecular scale can be obtained. Common metho ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bethel University (Minnesota)
Bethel University is a private Christian university and seminary in Arden Hills, Minnesota. It was founded in 1871 as a seminary and is affiliated with Converge. The university enrolls 5,600 students in undergraduate, graduate, and seminary programs. Its main campus is situated on about 290 acres on the east side of Lake Valentine just south of Interstate 694. History Bethel University has its origins in the Baptist Theological Union's Swedish Seminary, which was founded by Swedish Baptist pastor John Alexis Edgren in Chicago, Illinois in 1871. In 1914, the Baptist General Conference has become the school's main partner.Randall Herbert Balmer, ''Encyclopedia of Evangelicalism: Revised and expanded edition'', Baylor University Press, USA, 2004, p. 74 The seminary merged with Bethel Academy and relocated its campus to Saint Paul, Minnesota. In 1931, the Academy became Bethel Junior College. The addition of a four-year liberal arts college program created ''Bethel College and Sem ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
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