Myxococcus
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Myxococcus
''Myxococcus'' is a genus of bacteria in the family Myxococcaceae. Myxococci are Gram-negative, spore-forming, chemoorganotrophic, obligate aerobes. They are elongated rods with rounded or tapered ends, and they are nonflagellated. The cells move by gliding and can predate other bacteria. The genus has been isolated from soil. At least eleven species had been identified with confidence by late 2020 and each had been characterised to some extent. As well as using traditional biochemical tests, strains of some species had been compared using whole genome sequences. This approach has provided evidence that the genus, like most bacterial genera, has a core set of genes found in all members of the genus, along with others that are confined to particular species. The identity of ''Myxococcus'' species therefore continues to change. An example where taxonomy may be changed is that comparisons of genome sequences and biochemical tests indicated that '' M. xanthus'' and ''M. virescens'' ...
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Myxococcus Xanthus
''Myxococcus xanthus'' is a gram-negative, rod-shaped species of myxobacteria that exhibits various forms of self-organizing behavior in response to environmental cues. Under normal conditions with abundant food, it exists as a predatory, saprophytic single-species biofilm called a swarm. Under starvation conditions, it undergoes a multicellular development cycle. Colony growth A swarm of ''M. xanthus'' is a distributed system, containing millions of bacteria that communicate among themselves in a non-centralized fashion. Simple patterns of cooperative behavior among the members of the colony combine to generate complex group behaviors in a process known as "stigmergy". For example, the tendency for one cell to glide only when in direct contact with another results in the colony forming swarms called "wolf-packs" that may measure up to several inches wide. This behavior is advantageous to the members of the swarm, as it increases the concentration of extracellular digestive enz ...
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Myxococcus Llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis
''Myxococcus '' is a gram-negative, rod-shaped species of myxobacteria found in soil. It is a predator on other bacteria. The ends of the rod-shaped vegetative cells taper slightly. The colonies are pale brown and show swarming motility. It produces orange, roughly spherical fruiting bodies. A draft sequence of its genome showed significant differences from all previously known species of the genus '' Myxococcus''. It was isolated from soil collected near the settlement of , on the island of Anglesey in North Wales, and was named after this location. The scientific name of this bacterial species is considered the longest name in the binomial nomenclature system, bearing 73 characters in total. Despite this, it is not yet acknowledged by the International Journal of Systematic and Evolutionary Microbiology (IJSEM), and therefore is not considered to be valid. The current longest valid scientific name is ''Parastratiosphecomyia stratiosphecomyioides ''Parastratiosphecomyia s ...
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Myxococcaceae
Myxococcaceae is a family of gram-negative, rod-shaped bacteria. The family Myxococcaceae is encompassed within the myxobacteria ("slime bacteria"). The family is ubiquitously found in soils, marine, and freshwater environments. Production of compounds with medical uses by Myxococcaceae makes them useful in human health fields. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) Morphology and Behavior Cells can be motile with gliding and swarming behavior. The vegetative cell shape in the Myxococcaceae family is long rods, which vary in size between members. The most common fruiting body morphs are soft hump and knob shaped with possible colors of yellow, peach, white, or orange depending on species. Myxococcaceae are spore producing bacteria and are delineated by their spore shape. The myxospores are oval to round and are optically refractive. Quoru ...
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List Of Bacteria Genera
This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However many taxonomic names are taken from the GTDB release 07-RS207 (8th April 2022). Phyla {, border="0" style="width: 100%;" ! , - , style="border:0px" valign="top", {, class="wikitable sortable" style="width: 100%; font-size: 95%;" !Syperphylum !Phylum !Authority !Synonyms , - , Parakaryota , , , Myojin parakaryote , - , , " Canglongiota" , Zhang et al. 2022 , , - , , " Fervidibacteria" , , OctSpa1-106 , - , , " Heilongiota" , Zhang et al. 2022 , , - , , " Qinglongiota" , Zhang et al. 2022 , , - , , " Salinosulfoleibacteria" , Tazi et al. 2006 , , - , , " Teskebacteria" , Dojka 1998 , WS1 , - , , " Tharpellota" , Speth et al. 2022 , , - , Terrabacteria , Chloroflexota , Whitman et al. 2018 , "Thermomicrobiota" , - , Terrabacteria , " Dormibacterota ...
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Roland Thaxter
Roland Thaxter (August 28, 1858 – April 22, 1932) was an American mycologist, plant pathologist, botanist, and entomologist, renowned for his contribution to the insect parasitic fungi—Laboulbeniales. His college education was completed at Harvard, where he dedicated forty years to mycological and botanical research. His five-volume series on fungi in the order Laboulbeniales laid a solid foundation of research on these insect ectoparasites. He also contributed to the field of Plant Pathology. Biography Roland Thaxter was born in Newtonville, Massachusetts, 1858, the third and youngest child in the family. His parents were Levi Thaxter and Celia Thaxter, Celia (née Laighton) Thaxter. He married Mabel Gray Thaxter in 1887. Thaxter's personality was influenced greatly by his literary family. His father was a lawyer and an authority who brought the works of the poet Robert Browning to the American public. His mother, Celia Thaxter, was a distinguished poet, most well known for he ...
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Gliding
Gliding is a recreational activity and competitive air sport in which pilots fly unpowered aircraft known as gliders or sailplanes using naturally occurring currents of rising air in the atmosphere to remain airborne. The word ''soaring'' is also used for the sport. Gliding as a sport began in the 1920s. Initially the objective was to increase the duration of flights but soon pilots attempted cross-country flights away from the place of launch. Improvements in aerodynamics and in the understanding of weather phenomena have allowed greater distances at higher average speeds. Long distances are now flown using any of the main sources of rising air: ridge lift, thermals and lee waves. When conditions are favourable, experienced pilots can now fly hundreds of kilometres before returning to their home airfields; occasionally flights of more than are achieved. Some competitive pilots fly in races around pre-defined courses. These gliding competitions test pilots' abilities to mak ...
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List Of Prokaryotic Names With Standing In Nomenclature
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes The International Code of Nomenclature of Prokaryotes (ICNP) formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC) governs the scientific names for Bacteria and Archaea.P. H. A. Sneath, 2003. A short hist .... The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service. References External links List of Prokaryotic names with Standing in Nomenclature
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National Center For Biotechnology Information
The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The NCBI is located in Bethesda, Maryland, and was founded in 1988 through legislation sponsored by US Congressman Claude Pepper. The NCBI houses a series of databases relevant to biotechnology and biomedicine and is an important resource for bioinformatics tools and services. Major databases include GenBank for DNA sequences and PubMed, a bibliographic database for biomedical literature. Other databases include the NCBI Epigenomics database. All these databases are available online through the Entrez search engine. NCBI was directed by David Lipman, one of the original authors of the BLAST sequence alignment program and a widely respected figure in bioinformatics. GenBank NCBI had responsibility for making available the GenBank DNA seque ...
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The All-Species Living Tree Project
The All-Species Living Tree' Project is a collaboration between various academic groups/institutes, such as ARB Project, ARB, SILVA rRNA database project, and List of Prokaryotic names with Standing in Nomenclature, LPSN, with the aim of assembling a database of 16S ribosomal RNA, 16S rRNA sequences of all validly published species of ''Bacteria'' and ''Archaea''. At one stage, 23S ribosomal RNA, 23S sequences were also collected, but this has since stopped. Currently there are over 10,950 species in the aligned dataset and several more are being added either as new species are discovered or species that are not represented in the database are sequenced. Initially the latter group consisted of 7% of species. Similar (and more recent) projects include the Genomic Encyclopedia of Bacteria and Archaea (GEBA), which focused on whole genome sequencing of bacteria and archaea. Tree The tree was created by maximum likelihood analysis without bootstrap: consequently accuracy is traded ...
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Genome Taxonomy Database
The Genome Taxonomy Database (GTDB) is an online database that maintains information on a proposed nomenclature of prokaryotes, following a phylogenomic approach based on a set of conserved single-copy proteins. In addition to breaking up paraphyletic groups, this method also reassigns taxonomic ranks algorithmically, creating new names in both cases. Information for archaea was added in 2020, along with a species classification based on average nucleotide identity. Each update incorporates new genomes as well as human adjustments to the taxonomy. An open-source tool called GTDB-Tk is available to classify draft genomes into the GTDB hierarchy. The GTDB system, via GTDB-Tk, has been used to catalogue not-yet-named bacteria in the human gut microbiome and other metagenomic sources. The GTDB is incorporated into the ''Bergey's Manual of Systematics of Archaea and Bacteria'' in 2019 as its phylogenomic resource. See also * PhyloCode * National Center for Biotechnology Informa ...
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