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Longhurst Code
Longhurst code refers to a set of geospatial four-letter geocodes for referencing geographic regions in oceanography. The set of 56 geocodes represent biogeochemical provinces that partition the pelagic environment. It is assumed that each province represents a unique set of environmental conditions. They are named after Alan R. Longhurst, the author of "Ecological Geography of the Sea", the textbook in which these codes are defined.Ecological Geography of the Sea (), Academic Press, 2007 These codes have also been used in bioinformatic databases such as IMG to represent sample origins for sequenced microbial genomes, as a supplement to latitude and longitude Longitude (, ) is a geographic coordinate that specifies the east– west position of a point on the surface of the Earth, or another celestial body. It is an angular measurement, usually expressed in degrees and denoted by the Greek lette ... coordinate metrics. References {{Reflist Geocodes Oceanogra ...
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Longhurst Biogeographic Provinces
Longhurst is a surname. Notable people with the surname include: * Alan Longhurst (1925–2023), British-born Canadian oceanographer * Albert Henry Longhurst (1876–1955), Indianologist and archaeologist, Archaeological Commissioner of Ceylon * Cyril Longhurst (1878–1948), ASI * David Longhurst (1965–1990), English footballer * Eva Longhurst, one of Ontario Provincial Confederation of Regions Party candidates, 1990 Ontario provincial election * Garry Longhurst * Henry Longhurst (1909–1978), renowned British golf writer and commentator *Henry Longhurst (actor) (1891–1970), British actor * Jane Longhurst, school teacher murdered by Graham Coutts on 14 March 2003 * John Longhurst (born 1940), organist for the Mormon Tabernacle Choir for 30 years * Kate Longhurst, English footballer *Mark Longhurst, UK television newsreader and journalist *Martha Longhurst, UK TV ''Coronation Street'' character * Neil Longhurst (born 1984), English cricketer * Robert Longhurst (born 1949), Amer ...
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Geomatics
Geomatics is defined in the ISO/TC 211 series of standards as the " discipline concerned with the collection, distribution, storage, analysis, processing, presentation of geographic data or geographic information". Under another definition, it consists of products, services and tools involved in the collection, integration and management of geographic (geospatial) data. It is also known as geomatic(s) engineering (geodesy and geoinformatics engineering or geospatial engineering). Surveying engineering was the widely used name for geomatic(s) engineering in the past. History and etymology The term was proposed in French ("géomatique") at the end of the 1960s by scientist Bernard Dubuisson to reflect at the time recent changes in the jobs of surveyor and photogrammetrist. The term was first employed in a French Ministry of Public Works memorandum dated 1 June 1971 instituting a "standing committee of geomatics" in the government. The term was popularised in English by Frenc ...
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Geocode
A geocode is a code that represents a geographic entity (location or object). It is a unique identifier of the entity, to distinguish it from others in a finite set of geographic entities. In general the ''geocode'' is a human-readable and short identifier. Typical geocodes and entities represented by it: * ''Country code'' and subdivision code. Polygon of the administrative boundaries of a country or a subdivision. The main examples are ISO codes: ISO 3166-1 alpha-2 code (e.g. AF for Afghanistan or BR for Brazil), and its subdivision conventions, such as subdivision codes (e.g. AF-GHO for Ghor province) or subdivision codes (e.g. BR-AM for Amazonas state). * ''DGG cell ID''. Identifier of a cell of a discrete global grid: a Geohash code (e.g. ~0.023 km2 cell 6vjyngd at the Brazilian's center) or an OLC code (e.g. ~0.004 km2 cell 58PJ642P+4 at the same point). * ''Postal code''. Polygon of a postal area: a CEP code (e.g. 70040 represents a Brazilian ...
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Physical Geography
Physical geography (also known as physiography) is one of the three main branches of geography. Physical geography is the branch of natural science which deals with the processes and patterns in the natural environment such as the atmosphere, hydrosphere, biosphere, and geosphere. This focus is in contrast with the branch of human geography, which focuses on the built environment, and technical geography, which focuses on using, studying, and creating tools to obtain,analyze, interpret, and understand spatial information. The three branches have significant overlap, however. Sub-branches Physical geography can be divided into several branches or related fields, as follows: * Geomorphology is concerned with understanding the surface of the Earth and the processes by which it is shaped, both at the present as well as in the past. Geomorphology as a field has several sub-fields that deal with the specific landforms of various environments e.g. desert geomorphology and fluvi ...
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Oceanography
Oceanography (), also known as oceanology and ocean science, is the scientific study of the oceans. It is an Earth science, which covers a wide range of topics, including ecosystem dynamics; ocean currents, waves, and geophysical fluid dynamics; plate tectonics and the geology of the sea floor; and fluxes of various chemical substances and physical properties within the ocean and across its boundaries. These diverse topics reflect multiple disciplines that oceanographers utilize to glean further knowledge of the world ocean, including astronomy, biology, chemistry, climatology, geography, geology, hydrology, meteorology and physics. Paleoceanography studies the history of the oceans in the geologic past. An oceanographer is a person who studies many matters concerned with oceans, including marine geology, physics, chemistry and biology. History Early history Humans first acquired knowledge of the waves and currents of the seas and oceans in pre-historic times. Observations ...
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Pelagic
The pelagic zone consists of the water column of the open ocean, and can be further divided into regions by depth (as illustrated on the right). The word ''pelagic'' is derived . The pelagic zone can be thought of as an imaginary cylinder or water column between the surface of the sea and the bottom. Conditions in the water column change with depth: pressure increases; temperature and light decrease; salinity, oxygen, micronutrients (such as iron, magnesium and calcium) all change. Marine life is affected by bathymetry (underwater topography) such as the seafloor, shoreline, or a submarine seamount, as well as by proximity to the boundary between the ocean and the atmosphere at the ocean surface, which brings light for photosynthesis, predation from above, and wind stirring up waves and setting currents in motion. The pelagic zone refers to the open, free waters away from the shore, where marine life can swim freely in any direction unhindered by topographical constraints. Th ...
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Alan Longhurst
Alan Reece Longhurst (born 5 March 1925) is a British-born Canadian oceanographer who invented the Longhurst-Hardy Plankton Recorder, and is widely known for his contributions to the primary scientific literature, together with his numerous monographs, most notably the "Ecological Geography of the Sea". He led an effort that produced the first estimate of global primary production in the oceans using satellite imagery, and also quantified vertical carbon flux through the planktonic ecosystem via the biological pump. More recently, he has offered a number of critical reviews of several aspects of fishery management science and climate change science. Early life and education Alan Longhurst was born in Plymouth, England, the son of a naval dental surgeon. He spent four years in the British army, graduating from the Royal Military Academy Sandhurst at the end of the war (1945). He then went to take part in the Allied occupation of Austria, ending up in Somalia and Abyssinia with the ...
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Bioinformatics
Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combines biology, chemistry, physics, computer science, information engineering, mathematics and statistics to analyze and interpret the biological data. Bioinformatics has been used for '' in silico'' analyses of biological queries using computational and statistical techniques. Bioinformatics includes biological studies that use computer programming as part of their methodology, as well as specific analysis "pipelines" that are repeatedly used, particularly in the field of genomics. Common uses of bioinformatics include the identification of candidates genes and single nucleotide polymorphisms (SNPs). Often, such identification is made with the aim to better understand the genetic basis of disease, unique adaptations, desirable properties (e ...
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Integrated Microbial Genomes System
The Integrated Microbial GenomesIMG system is a genome browsing and annotation platform developed by the U.S. Department of Energy (DOE)-Joint Genome Institute. IMG contains all the draft and complete microbial genomes sequenced by the DOE-JGI integrated with other publicly available genomes (including Archaea, Bacteria, Eukarya, Viruses and Plasmids). IMG provides users a set of tools for comparative analysis of microbial genomes along three dimensions: genes, genomes and functions. Users can select and transfer them in the comparative analysis carts based upon a variety of criteria. IMG also includes a genome annotation pipeline that integrates information from several tools, including KEGG, Pfam, InterPro, and the Gene Ontology, among others. Users can also type or upload their own gene annotations (called MyIMG gene annotations) and the IMG system will allow them to generate Genbank or EMBL format files containing these annotations. In successive releases IMG has expanded to i ...
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Genomics
Genomics is an interdisciplinary field of biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, three-dimensional structural configuration. In contrast to genetics, which refers to the study of ''individual'' genes and their roles in inheritance, genomics aims at the collective characterization and quantification of ''all'' of an organism's genes, their interrelations and influence on the organism. Genes may direct the production of proteins with the assistance of enzymes and messenger molecules. In turn, proteins make up body structures such as organs and tissues as well as control chemical reactions and carry signals between cells. Genomics also involves the sequencing and analysis of genomes through uses of high throughput DNA sequencing and bioinformatics to assemble and analyze the function and structure of entire genomes. Advances in ...
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Latitude
In geography, latitude is a coordinate that specifies the north– south position of a point on the surface of the Earth or another celestial body. Latitude is given as an angle that ranges from –90° at the south pole to 90° at the north pole, with 0° at the Equator. Lines of constant latitude, or ''parallels'', run east–west as circles parallel to the equator. Latitude and ''longitude'' are used together as a coordinate pair to specify a location on the surface of the Earth. On its own, the term "latitude" normally refers to the ''geodetic latitude'' as defined below. Briefly, the geodetic latitude of a point is the angle formed between the vector perpendicular (or ''normal'') to the ellipsoidal surface from the point, and the plane of the equator. Background Two levels of abstraction are employed in the definitions of latitude and longitude. In the first step the physical surface is modeled by the geoid, a surface which approximates the mean sea level over the ocean ...
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Longitude
Longitude (, ) is a geographic coordinate that specifies the east–west position of a point on the surface of the Earth, or another celestial body. It is an angular measurement, usually expressed in degrees and denoted by the Greek letter lambda (λ). Meridians are semicircular lines running from pole to pole that connect points with the same longitude. The prime meridian defines 0° longitude; by convention the International Reference Meridian for the Earth passes near the Royal Observatory in Greenwich, England on the island of Great Britain. Positive longitudes are east of the prime meridian, and negative ones are west. Because of the Earth's rotation, there is a close connection between longitude and time measurement. Scientifically precise local time varies with longitude: a difference of 15° longitude corresponds to a one-hour difference in local time, due to the differing position in relation to the Sun. Comparing local time to an absolute measure of time allows ...
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