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Herbaspirillum Rhizosphaerae
''Herbaspirillum rhizosphaerae'' is a Gram-negative bacterium of the genus ''Herbaspirillum'' isolated from rhizosphere soil of ''Allium victorialis'' var. ''platyphyllum'' on Ulleung Island Ulleungdo (also spelled Ulreungdo; Hangul: , ) is a South Korean island 120 km (75 mi) east of the Korean Peninsula in the Sea of Japan, formerly known as the Dagelet Island or Argonaut Island in Europe. Volcanic in origin, the rocky s ... in Korea. References External linksType strain of ''Herbaspirillum rhizosphaerae'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Burkholderiales Bacteria described in 2007 {{betaproteobacteria-stub ...
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Bacterium
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationshi ...
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Rhizosphere
The rhizosphere is the narrow region of soil or substrate that is directly influenced by root secretions and associated soil microorganisms known as the root microbiome. Soil pores in the rhizosphere can contain many bacteria and other microorganisms that feed on sloughed-off plant cells, termed ''rhizodeposition'', and the proteins and sugars released by roots, termed root exudates. This symbiosis leads to more complex interactions, influencing plant growth and competition for resources. Much of the nutrient cycling and disease suppression by antibiotics required by plants, occurs immediately adjacent to roots due to root exudates and metabolic products of symbiotic and pathogenic communities of microorganisms. The rhizosphere also provides space to produce allelochemicals to control neighbours and relatives. The ''rhizoplane'' refers to the root surface including its associated soil particles which closely interact with each other. The plant-soil feedback loop and other p ...
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Allium Victorialis
''Allium victorialis'', commonly known as victory onion, Alpine leek, and Alpine broad-leaf allium is a broad-leaved Eurasian species of wild onion. It is a perennial of the Amaryllis family that occurs widely in mountainous regions of Europe and parts of Asia (Caucasus and Himalayas). Some authors consider certain East Asian and Alaskan populations as constituting subspecies ''platyphyllum'' within the species ''Allium victorialis''. Recent sources recognize this group as a distinct species, called ''Allium ochotense.'' General description ''Allium victorialis'' attains a height of and forms a sheathed bulb ("root-stalk") about the thickness of a finger and long.. height; and rootstalk . Leaves are broad elliptical or lanceolate. Flowers (perianths) are whitish green. Distribution ''Allium victorialis'' is found widely across mountain ranges Europe, as well as the Caucasus and the Himalayas. Nomenclature The specific epithet ''victorialis'' comes from the German ''Si ...
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Ulleung Island
Ulleungdo (also spelled Ulreungdo; Hangul: , ) is a South Korean island 120 km (75 mi) east of the Korean Peninsula in the Sea of Japan, formerly known as the Dagelet Island or Argonaut Island in Europe. Volcanic in origin, the rocky steep-sided island is the top of a large stratovolcano which rises from the seafloor, reaching a maximum elevation of at Seonginbong Peak. The island is in length and in width; it has an area of . It has a population of 10,426 inhabitants. The island makes up the main part of Ulleung County, North Gyeongsang Province, South Korea and is a popular tourist destination. The main city of Ulleung-do is the port of Dodong (), which serves as the main ferry port between Ulleung-do and the South Korean mainland. After tourism, the main economic activity is fishing, including its well-known harvest of squid, which can be seen drying in the sun in many places. History The island consists primarily of trachyandesite rock. A major explosive ...
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Burkholderiales
The Burkholderiales are an order of Pseudomonadota.George M. Garrity: '' Bergey's Manual of Systematic Bacteriology''. 2. Auflage. Springer, New York, 2005, Vol. 2: ''The Proteobacteria Part C: The Alpha-, Beta-, Delta-, and Epsilonproteabacteria'' Like all Pseudomonadota, they are Gram-negative. They include several pathogenic bacteria, including species of ''Burkholderia'', ''Bordetella'', and ''Ralstonia''. They also include '' Oxalobacter'' and related genera, which are unusual in using oxalic acid as their source of carbon. Other well-studied genera include ''Alcaligenes'', '' Cupriavidus'', ''Achromobacter'', ''Comamonas'', '' Delftia'', ''Massilia'', '' Duganella'', '' Janthinobacterium'', ''Polynucleobacter'' (important freshwater bacterioplankton), non-pathogenic ''Paraburkholderia'', '' Caballeronia'', '' Polaromonas'', ''Thiomonas'', ''Collimonas'', '' Hydrogenophaga'', ''Sphaerotilus'', '' Variovorax'', '' Acidovorax'', '' Rubrivivax'' and ''Rhodoferax'' (both members ...
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