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Geothrix Fermentans
''Geothrix fermentans'' is a rod-shaped, anaerobic bacterium. It is about 0.1 µm in diameter and ranges from 2-3 µm in length. Cell arrangement occurs singly and in chains. ''Geothrix fermentans'' can normally be found in aquatic sediments such as in aquifers. As an anaerobic chemoorganotroph, this organism is best known for its ability to use electron acceptors Fe(III), as well as other high potential metals. It also uses a wide range of substrates as electron donors. Research on metal reduction by ''G. fermentans'' has contributed to understanding more about the geochemical cycling of metals in the environment. Taxonomy history ''Geothrix fermentans'' was isolated from metal-contaminated waters of an aquifer in 1999 by John D. Coates from Southern Illinois University and by others from the University of Massachusetts. The novel strain was originally named "Strain H-5T ". After classifying metabolism and confirming the presence and number of c-type cytochromes, Coat ...
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Geochemical Cycle
In Earth science, a geochemical cycle is the pathway that chemical elements take in the surface and crust of the Earth. The term " geochemical" tells us that geological and chemical factors are all included. The migration of heated and compressed chemical elements and compounds such as silicon, aluminium, and general alkali metals through the means of subduction and volcanism is known in the geological world as geochemical cycles. The geochemical cycle encompasses the natural separation and concentration of elements and heat-assisted recombination processes. Changes may not be apparent over a short term, such as with biogeochemical cycles, but over a long term changes of great magnitude occur, including the evolution of continents and oceans. Differentiating biogeochemical cycles Some may use the terms biogeochemical cycle and geochemical cycle interchangeably because both cycles deal with Earth's reservoirs. However, a biogeochemical cycle refers to the chemical interactions i ...
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Southern Illinois University
Southern Illinois University is a system of public universities in the southern region of the U.S. state of Illinois. Its headquarters is in Carbondale, Illinois. Board of trustees The university is governed by the nine member SIU Board of Trustees. Seven members are appointed by the governor and confirmed by the state senate. Two members are elected by the student bodies of the Carbondale and Edwardsville campuses. Southern Illinois University Carbondale Founded in Carbondale in 1869 as Southern Illinois Normal College, Southern Illinois University Carbondale (SIUC, usually referred to as SIU) is the flagship campus of the Southern Illinois University system and is the third oldest of Illinois's twelve state universities. SIUC includes six colleges: the College of Agricultural, Life, and Physical Sciences (CALPS), the College of Arts and Media (CAM), the College of Business and Analytics (CoBA), the College of Engineering, Computing, Technology, and Mathematics (CoECTM) ...
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University Of Massachusetts
The University of Massachusetts is the five-campus public university system and the only public research system in the Commonwealth of Massachusetts. The university system includes five campuses (Amherst, Boston, Dartmouth, Lowell, and a medical school in Worcester), a satellite campus in Springfield and also 25 campuses throughout California and Washington with the University of Massachusetts Global. The system administration is in Boston and Shrewsbury and is accredited by the New England Association of Schools and Colleges and across its campuses enrolls 75,065 students. Campuses The University of Massachusetts Amherst is the flagship and largest school in the UMass system. It was also the first one established, dating back to 1863, when it was founded as the Massachusetts Agricultural College. The University of Massachusetts Chan Medical School was founded in 1962, and is located in Worcester. The University of Massachusetts Boston, originally established in 1964, was mer ...
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16s RRNA
16S rRNA may refer to: * 16S ribosomal RNA 16 S ribosomal RNA (or 16 S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome ( SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The genes coding for it are referred to as 16S rR ..., the prokaryotic ribosomal subunit * Mitochondrially encoded 16S RNA, the eukaryotic ribosomal subunit {{Short pages monitor ...
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Shewanella
''Shewanella'' is the sole genus included in the marine bacteria family Shewanellaceae. Some species within it were formerly classed as ''Alteromonas''. ''Shewanella'' consists of facultatively anaerobic Gram-negative rods, most of which are found in extreme aquatic habitats where the temperature is very low and the pressure is very high. ''Shewanella'' bacteria are a normal component of the surface flora of fish and are implicated in fish spoilage. ''Shewanella chilikensis'', a species of the genus ''Shewanella'' commonly found in the marine sponges of Saint Martin's Island of the Bay of Bengal, Bangladesh. ''Shewanella oneidensis'' MR-1 is a widely used laboratory model to study anaerobic respiration of metals and other anaerobic extracellular electron acceptors, and for teaching about microbial electrogenesis and microbial fuel cells. Biochemical characteristics of ''Shewanella'' species Colony, morphological, physiological, and biochemical characteristics of ''Shewanell ...
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Ferrimonas
''Ferrimonas'' is a genus of bacteria from the family of Ferrimonadaceae Ferrimonadaceae is a family in the order of Alteromonadales The Alteromonadales are an order of Pseudomonadota. Although they have been treated as a single family, the Alteromonadaceae, they were divided into eight by Ivanova ''et al.'' in 200 .... References Alteromonadales Bacteria genera {{Alteromonadales-stub ...
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Fermentation (biochemistry)
Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food production, it may more broadly refer to any process in which the activity of microorganisms brings about a desirable change to a foodstuff or beverage. The science of fermentation is known as zymology. In microorganisms, fermentation is the primary means of producing adenosine triphosphate (ATP) by the degradation of organic nutrients anaerobically. Humans have used fermentation to produce foodstuffs and beverages since the Neolithic age. For example, fermentation is used for preservation in a process that produces lactic acid found in such sour foods as pickled cucumbers, kombucha, kimchi, and yogurt, as well as for producing alcoholic beverages such as wine and beer. Fermentation also occurs within the gastrointestinal tracts of all an ...
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Electron Transport Chain
An electron transport chain (ETC) is a series of protein complexes and other molecules that transfer electrons from electron donors to electron acceptors via redox reactions (both reduction and oxidation occurring simultaneously) and couples this electron transfer with the transfer of protons (H+ ions) across a membrane. The electrons that transferred from NADH and FADH2 to the ETC involves 4 multi-subunit large enzymes complexes and 2 mobile electron carriers. Many of the enzymes in the electron transport chain are membrane-bound. The flow of electrons through the electron transport chain is an exergonic process. The energy from the redox reactions creates an electrochemical proton gradient that drives the synthesis of adenosine triphosphate (ATP). In aerobic respiration, the flow of electrons terminates with molecular oxygen as the final electron acceptor. In anaerobic respiration, other electron acceptors are used, such as sulfate. In an electron transport chain, the redo ...
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Adenosine Triphosphate
Adenosine triphosphate (ATP) is an organic compound that provides energy to drive many processes in living cells, such as muscle contraction, nerve impulse propagation, condensate dissolution, and chemical synthesis. Found in all known forms of life, ATP is often referred to as the "molecular unit of currency" of intracellular energy transfer. When consumed in metabolic processes, it converts either to adenosine diphosphate (ADP) or to adenosine monophosphate (AMP). Other processes regenerate ATP. The human body recycles its own body weight equivalent in ATP each day. It is also a precursor to DNA and RNA, and is used as a coenzyme. From the perspective of biochemistry, ATP is classified as a nucleoside triphosphate, which indicates that it consists of three components: a nitrogenous base (adenine), the sugar ribose, and the Polyphosphate, triphosphate. Structure ATP consists of an adenine attached by the 9-nitrogen atom to the 1′ carbon atom of a sugar (ribose), which i ...
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Geobacteraceae
The Geobacteraceae are a family within the Thermodesulfobacteriota. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) See also * List of bacterial orders * List of bacteria genera This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However many taxonomic names are ... References Bacteria families Thermodesulfobacteriota {{Bacteria-stub ...
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Acidobacteriota
Acidobacteriota is a phylum of Gram-negative bacteria. Its members are physiologically diverse and ubiquitous, especially in soils, but are under-represented in culture. Description Members of this phylum are physiologically diverse, and can be found in a variety of environments including soil, decomposing wood, hot springs, oceans, caves, and metal-contaminated soils. The members of this phylum are particularly abundant in soil habitats representing up to 52% of the total bacterial community. Environmental factors such as pH and nutrients have been seen to drive Acidobacteriota dynamics. Many Acidobacteriota are acidophilic, including the first described member of the phylum, ''Acidobacterium capsulatum''. Other notable species are '' Holophaga foetida'', '' Geothrix fermentans'', '' Acanthopleuribacter pedis'' and '' Bryobacter aggregatus''. Since they have only recently been discovered and the large majority have not been cultured, the ecology and metabolism of these bacteri ...
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Bioelectricity
In developmental biology, bioelectricity refers to the regulation of cell, tissue, and organ-level patterning and behavior as the result of endogenous electrically mediated signaling. Cells and tissues of all types use ion fluxes to communicate electrically. The charge carrier in bioelectricity is the ion (charged atom), and an electric current and field is generated whenever a net ion flux occurs. Endogenous electric currents and fields, ion fluxes, and differences in resting potential across tissues comprise a signaling system. It functions alongside (in series and in parallel to) biochemical factors, transcriptional networks, and other physical forces to regulate the cell behavior and large-scale patterning during embryogenesis, regeneration, cancer, and many other processes. Overview Developmental bioelectricity is a sub-discipline of biology, related to, but distinct from, neurophysiology and bioelectromagnetics. Developmental bioelectricity refers to the endogenous ion f ...
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