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The Eukaryotic Pathgen Database, or EuPathDB, is a database of bioinformatic and experimental data related to a variety of eukaryotic pathogens. It was established in 2006 under a National Institutes of Health program to create Bioinformatics Resource Centers to facilitate research on pathogens that may pose biodefense threats. EuPathDB stores data related to its organisms of interest and provides tools for searching through and analyzing the data. It currently consists of 14 component databases, each dedicated to a certain research topic. EuPathDB includes: * Genomics resources covering eukaryotic protozoan parasites * Host responses to parasite infection (HostDB) * Orthologs (OrthoMCL) * Clinical study data (ClinEpiDB) * Microbiome data (MicrobiomeDB) History EuPathDB was established under the NIH Bioinformatics Resource Centers program as ApiDB, a resource meant to cover Apicomplexan parasites. ApiDB originally consisted of component sites CryptoDB (for ''Cryptosporidium''), Pla ...
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EuPathDB Logo
The Eukaryotic Pathgen Database, or EuPathDB, is a database of bioinformatic and experimental data related to a variety of eukaryotic pathogens. It was established in 2006 under a National Institutes of Health program to create Bioinformatics Resource Centers to facilitate research on pathogens that may pose biodefense threats. EuPathDB stores data related to its organisms of interest and provides tools for searching through and analyzing the data. It currently consists of 14 component databases, each dedicated to a certain research topic. EuPathDB includes: * Genomics resources covering eukaryotic protozoan parasites * Host responses to parasite infection (HostDB) * Orthologs (OrthoMCL) * Clinical study data (ClinEpiDB) * Microbiome data (MicrobiomeDB) History EuPathDB was established under the NIH Bioinformatics Resource Centers program as ApiDB, a resource meant to cover Apicomplexan parasites. ApiDB originally consisted of component sites CryptoDB (for ''Cryptosporidium''), Pla ...
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Bioinformatics Organizations
Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combines biology, chemistry, physics, computer science, information engineering, mathematics and statistics to analyze and interpret the biological data. Bioinformatics has been used for '' in silico'' analyses of biological queries using computational and statistical techniques. Bioinformatics includes biological studies that use computer programming as part of their methodology, as well as specific analysis "pipelines" that are repeatedly used, particularly in the field of genomics. Common uses of bioinformatics include the identification of candidates genes and single nucleotide polymorphisms (SNPs). Often, such identification is made with the aim to better understand the genetic basis of disease, unique adaptations, desirable properties (esp ...
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PlasmoDB
PlasmoDB is a ''biological database'' for the genus ''Plasmodium''. The database is a member of the ''EuPathDB'' project. The database contains extensive ''genome'', ''proteome'' and ''metabolome'' information relating to malaria parasites. See also * ''Plasmodium'' * ''Malaria Malaria is a mosquito-borne infectious disease that affects humans and other animals. Malaria causes symptoms that typically include fever, tiredness, vomiting, and headaches. In severe cases, it can cause jaundice, seizures, coma, or death. S ...'' References External links * Genome databases *PlasmoDB {{Biodatabase-stub ...
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Piroplasmida
Piroplasmida is an order of parasites in the phylum Apicomplexa. They divide by binary fission and as sporozoan parasites they possess sexual and asexual phases (sexual reproduction occurs in the tick gut). They include the tick parasites ''Babesia'' and ''Theileria''. Description They are minute rounded or pyriform parasites found within erythrocytes, or other circulating or endothelial cells of vertebrates, where they reproduce by merogony. The trophozoite stage is separated from erythrocyte by a single membrane. This distinguishes them from other blood parasites that usually have at least two membranes. An apical complex with a polar ring and rhopteries occurs, but without a conoid and usually without associated pellicular microtubules. They lack flagella and do not form either oocysts or spores. The known vectors are ticks or leeches in which they undergo sporogony; sexual reproduction probably occurs in the vector. See also * Babesiosis Babesiosis or piroplasmos ...
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