Cocksfoot Mottle Virus
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Cocksfoot Mottle Virus
Cocksfoot mottle virus (CfMV) is a pathogenic plant virus belonging to the genus ''Sobemovirus''. The virus appears in southern and central England. It is transmitted by beetles '' Lema melanopa'' and ''Lema lichenis'' and is common in crops of cocksfoot and cocksfoot/legume mixtures. Molecular biology CfMV's P1 protein, required for infection, has been found to interfere with RNAi pathways in plants species such as '' Nicotiana benthamiana'' and ''Nicotiana tabacum''. The polyprotein coat of CfMV is made up of two proteins, encoded by overlapping open reading frames (2a and 2b) which are transcribed through a ribosomal frameshift mechanism. This mechanism is reliant upon a small stem-loop Stem-loop intramolecular base pairing is a pattern that can occur in single-stranded RNA. The structure is also known as a hairpin or hairpin loop. It occurs when two regions of the same strand, usually complementary in nucleotide sequence when ... structure and a 'slippery' repeat seq ...
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Plant Virus
Plant viruses are viruses that affect plants. Like all other viruses, plant viruses are obligate intracellular parasites that do not have the molecular machinery to replicate without a host. Plant viruses can be pathogenic to higher plants. Most plant viruses are rod-shaped, with protein discs forming a tube surrounding the viral genome; isometric particles are another common structure. They rarely have an envelope. The great majority have an RNA genome, which is usually small and single stranded (ss), but some viruses have double-stranded (ds) RNA, ssDNA or dsDNA genomes. Although plant viruses are not as well understood as their animal counterparts, one plant virus has become very recognizable: ''tobacco mosaic virus'' (TMV), the first virus to be discovered. This and other viruses cause an estimated US$60 billion loss in crop yields worldwide each year. Plant viruses are grouped into 73 genera and 49 families. However, these figures relate only to cultivated plants, which r ...
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Genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus comes above species and below family (taxonomy), family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. ''Panthera leo'' (lion) and ''Panthera onca'' (jaguar) are two species within the genus ''Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomy (biology), taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants ...
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Sobemovirus
''Sobemovirus'' is a genus of viruses. Plants serve as natural hosts. There are 20 species in this genus. Diseases associated with this genus include: mosaics and mottles. Structure Viruses in ''Sobemovirus'' are non-enveloped, with icosahedral geometries, and T=3 symmetry. The diameter is around 30 nm. Genome The genome is a single piece of linear, positive-sense, single-stranded RNA, 4,100–5,700 nucleotides in length.Index of Viruses—Sobemovirus (2006). In: ICTVdB—The Universal Virus Database, version 4. Büchen-Osmond, C (Ed), Columbia University, New York, USA. The genome encodes five open reading frames: ORF1, ORFs 2a and 2b, ORF3 and ORFx. ORF1 encodes P1 which plays a role in suppression of silencing and virus movement. ORFs 2a and 2b encode the replicational polyproteins P2a and P2ab. Translation of ORF2a from the genomic RNA is dependent on a leaky scanning mechanism. ORF3 encodes the coat protein. ORFx is conserved in all sobemoviruses. It overlaps ...
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England
England is a country that is part of the United Kingdom. It shares land borders with Wales to its west and Scotland to its north. The Irish Sea lies northwest and the Celtic Sea to the southwest. It is separated from continental Europe by the North Sea to the east and the English Channel to the south. The country covers five-eighths of the island of Great Britain, which lies in the North Atlantic, and includes over 100 smaller islands, such as the Isles of Scilly and the Isle of Wight. The area now called England was first inhabited by modern humans during the Upper Paleolithic period, but takes its name from the Angles, a Germanic tribe deriving its name from the Anglia peninsula, who settled during the 5th and 6th centuries. England became a unified state in the 10th century and has had a significant cultural and legal impact on the wider world since the Age of Discovery, which began during the 15th century. The English language, the Anglican Church, and Engli ...
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Beetle
Beetles are insects that form the order Coleoptera (), in the superorder Endopterygota. Their front pair of wings are hardened into wing-cases, elytra, distinguishing them from most other insects. The Coleoptera, with about 400,000 described species, is the largest of all orders, constituting almost 40% of described insects and 25% of all known animal life-forms; new species are discovered frequently, with estimates suggesting that there are between 0.9 and 2.1 million total species. Found in almost every habitat except the sea and the polar regions, they interact with their ecosystems in several ways: beetles often feed on plants and fungi, break down animal and plant debris, and eat other invertebrates. Some species are serious agricultural pests, such as the Colorado potato beetle, while others such as Coccinellidae (ladybirds or ladybugs) eat aphids, scale insects, thrips, and other plant-sucking insects that damage crops. Beetles typically have a particularly hard e ...
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Cereal Leaf Beetle
The cereal leaf beetle (''Oulema melanopus'') is a significant crop pest, described by Carl Linnaeus in 1758. Life history One generation of this beetle is produced a year. Adults feed before winter and spend most of their overwintering time in protected areas such as wind rows, crop stubble, and tree bark crevices. Adults mate once the temperature warms to above 9–10 degrees Celsius (or 44.6 degrees F) and females have a relatively long laying period (about 45–60 days), when they deposit eggs on the undersides of leaves. The larvae hatch in 7–15 days, and start the most damaging eating of the entire lifecycle. These larvae mature in 12–20 days. Larvae are the greatest threat to crops, as they eat the superficial layer of leaves, hindering the leaves' photosynthetic potential. According to Kon, Zabik, Webster, and Leavitt, a chemical factor attracts the beetles to leaves, and that chemical factor is directly related to hydrophobicity. Pupation occurs in soil, with the adu ...
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Dactylis
''Dactylis'' is a genus of Eurasian and North African plants in the bluegrass subfamily within the grass family. ''Dactylis'' is native to North Africa, they are found throughout the world, and are an invasive species. They are known in English as cock's-foot or cocksfoot grasses, also sometimes as orchard grasses. Taxonomy The genus has been treated as containing only a single species ''Dactylis glomerata'' by many authors, treating variation in the genus at only subspecific rank within ''D. glomerata'',Flora Europaea''Dactylis glomerata''Flora of China Town''Dactylis''/ref> but more recently, there has been a trend to accept two species,Germplasm Resources Information NetworkSpecies Records of ''Dactylis'' while some authors accept even more species in the genus, particularly island endemic species in Macaronesia.Schönfelder, P., & Ludwig, D. (1996). Dactylis metlesicsii (Poaceae), eine neue Art der Gebirgsvegetation von Tenerife, Kanarische Inseln. ''Willdenowia'' 26 (1– ...
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Legume
A legume () is a plant in the family Fabaceae (or Leguminosae), or the fruit or seed of such a plant. When used as a dry grain, the seed is also called a pulse. Legumes are grown agriculturally, primarily for human consumption, for livestock forage and silage, and as soil-enhancing green manure. Well-known legumes include beans, soybeans, chickpeas, peanuts, lentils, lupins, mesquite, carob, tamarind, alfalfa, and clover. Legumes produce a botanically unique type of fruit – a simple dry fruit that develops from a simple carpel and usually dehisces (opens along a seam) on two sides. Legumes are notable in that most of them have symbiotic nitrogen-fixing bacteria in structures called root nodules. For that reason, they play a key role in crop rotation. Terminology The term ''pulse'', as used by the United Nations' Food and Agriculture Organization (FAO), is reserved for legume crops harvested solely for the dry seed. This excludes green beans and green peas, which a ...
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RNAi
RNA interference (RNAi) is a biological process in which RNA molecules are involved in sequence-specific suppression of gene expression by double-stranded RNA, through translational or transcriptional repression. Historically, RNAi was known by other names, including ''co-suppression'', ''post-transcriptional gene silencing'' (PTGS), and ''quelling''. The detailed study of each of these seemingly different processes elucidated that the identity of these phenomena were all actually RNAi. Andrew Fire and Craig C. Mello shared the 2006 Nobel Prize in Physiology or Medicine for their work on RNAi in the nematode worm ''Caenorhabditis elegans'', which they published in 1998. Since the discovery of RNAi and its regulatory potentials, it has become evident that RNAi has immense potential in suppression of desired genes. RNAi is now known as precise, efficient, stable and better than antisense therapy for gene suppression. Antisense RNA produced intracellularly by an expression vector ma ...
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Nicotiana Benthamiana
''Nicotiana benthamiana'', colloquially known as benth or benthi, is a species of ''Nicotiana'' indigenous to Australia. It is a close relative of tobacco. A synonym for this species is ''Nicotiana suaveolens'' var. ''cordifolia'', a description given by George Bentham in ''Flora Australiensis'' in 1868. This was transferred to ''Nicotiana benthamiana'' by Karel Domin in ''Bibliotheca Botanica'' (1929), honoring the original author in the specific epithet. History The plant was used by people of Australia as a stimulant, containing nicotine and other alkaloids, before the introduction of commercial tobacco ('' N. tabacum'' and '' N. rustica''). Indigenous names for it include ''tjuntiwari'' and ''muntju''. It was first collected on the north coast of Australia by Benjamin Bynoe on a voyage of in 1837. Description The herbaceous plant is found amongst rocks on hills and cliffs throughout the northern regions of Australia. Variable in height and habit, the species may be er ...
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Nicotiana Tabacum
''Nicotiana tabacum'', or cultivated tobacco, is an annually grown herbaceous plant of the ''Nicotiana'' genus. The plant is tropical in origin, is commonly grown throughout the world, and is often found in cultivation. It grows to heights between 1 and 2 meters (3' to 6'). Research is ongoing into its ancestry among wild ''Nicotiana'' species, but it is believed to be a hybrid of ''Nicotiana sylvestris'', '' Nicotiana tomentosiformis'', and possibly '' Nicotiana otophora''. It is the most commonly grown of all plants in the genus ''Nicotiana,'' the plants' leaves commercially grown to be processed into tobacco. Description It is an annual plant that grows high and is sticky hairy on all parts. The stems are thick and not very branched. The leaves can be over long with the blades ovate to elliptical, or obovate, pointed towards the front and, at the base, run down the stem or are sessile, encompassing the stem. The scented inflorescences are multi-branched panicles. The flow ...
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Virus Research
''Virus Research'' is a peer-reviewed scientific journal which focuses on fundamental research in all aspects of virology. The journal was established in 1984 by Brian Mahy and Richard Compans. Abstracting and indexing The journal is abstracted and indexed in: According to the ''Journal Citation Reports'', the journal has a 2018 impact factor The impact factor (IF) or journal impact factor (JIF) of an academic journal is a scientometric index calculated by Clarivate that reflects the yearly mean number of citations of articles published in the last two years in a given journal, as ... of 2.736. In 2021, the impact factor was updated to 6.286. References Virology journals Hybrid open access journals {{Virology-journal-stub ...
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