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Aestuariibaculum Suncheonense
''Aestuariibaculum suncheonense'' is a Gram-negative, strictly aerobic, halotolerant and non-motil bacterium from the genus of Aestuariibaculum which has been isolated from tidal flat from the Suncheon Suncheon () (''Suncheon-si'') is a city in South Jeolla Province, South Korea. It is a scenic agricultural and industrial city of around 250,000 people near Suncheon Bay. It is located in the southeastern corner of Jeollanam-do, just over an hour ... bay in Korea. References External linksType strain of ''Aestuariibaculum suncheonense'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Flavobacteria Bacteria described in 2013 {{Flavobacteria-stub ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Bacteroidota
The phylum Bacteroidota (synonym Bacteroidetes) is composed of three large classes of Gram-negative, nonsporeforming, anaerobic or aerobic, and rod-shaped bacteria that are widely distributed in the environment, including in soil, sediments, and sea water, as well as in the guts and on the skin of animals. Although some ''Bacteroides'' spp. can be opportunistic pathogens, many ''Bacteroidota'' are symbiotic species highly adjusted to the gastrointestinal tract. ''Bacteroides'' are highly abundant in intestines, reaching up to 1011 cells g−1 of intestinal material. They perform metabolic conversions that are essential for the host, such as degradation of proteins or complex sugar polymers. ''Bacteroidota'' colonize the gastrointestinal tract already in infants, as non-digestible oligosaccharides in mother milk support the growth of both ''Bacteroides'' and ''Bifidobacterium'' spp. ''Bacteroides'' spp. are selectively recognized by the immune system of the host through specific ...
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Flavobacteriia
The class Flavobacteriia is composed of a single order of environmental bacteria. According to Bernardet ''et al''., Flavobacteriia are Gram-negative aerobic rods, 2–5 μm long, 0.3–0.5 μm wide, with rounded or tapered ends that are motile by gliding, yellow (cream to orange) colonies on agar, decompose several polysaccharides but not cellulose, G+C contents of 32–37%, and are widely distributed in soil and fresh and seawater habitats. In particular, Flavobacteriia are prominent members of marine biofilms. The type species In zoological nomenclature, a type species (''species typica'') is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the species that contains the biological type specime ... ''Flavobacterium aquatile'' was isolated from a well in Kent, England. Flavobacteriia are a group of commensal bacteria and opportunistic pathogens. '' Flavobacterium psychrophilum'' ...
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Flavobacteriales
The order Flavobacteriales comprises several families of environmental bacteria. Comparative genomics and molecular signatures ''Flavobacteriales'' is of one of the orders from the phylum ''Bacteroidota''. Comparative genomic studies have identified several conserved indels, as well as 27 proteins that are uniquely shared by different sequenced Flavobacteriales and Bacteroidota species supporting this inference. Additionally, these studies have also identified 38 proteins that seem to be specific for the species from the order ''Flavobacteriales''. Of these proteins, 26 were present in all sequenced species, while the remaining 12 were missing in only one or two species. These signature proteins provide potential molecular markers for this order. Several proteins have also been identified which are unique to the ''Flavobacteriales'' and ''Bacteroidales'' orders, indicating the species from these two orders shared a common ancestor exclusive of other ''Bacteroidota''. Phylogeny T ...
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Flavobacteriaceae
The family Flavobacteriaceae is composed of environmental bacteria. Most species are aerobic, while some are microaerobic to anaerobic; for example ''Capnocytophaga'' and '' Coenonia''. Genera The family ''Flavobacteriaceae'' comprises the following genera: * '' Actibacter'' Kim ''et al''. 2008 * '' Aequorivita'' Bowman and Nichols 2002 * '' Aestuariibaculum'' Jeong ''et al''. 2013 * '' Aestuariimonas'' Park ''et al''. 2018 * '' Aestuariivivens'' Park ''et al''. 2015 * '' Algibacter'' Nedashkovskaya ''et al''. 2004 * '' Algitalea'' Yoon ''et al''. 2015 * "''Algorimicrobium''" García-López ''et al''. 2019 * "''Altibacter''" Chen ''et al''. 2014 * "''Altuibacter''" Chen ''et al''. 2013 * '' Amniculibacterium'' Chen ''et al''. 2020 * "''Candidatus'' Amoebinatus" Greub ''et al''. 2004 * '' Antarcticibacterium'' Li ''et al''. 2018 * '' Antarcticimonas'' Yang ''et al''. 2014 * '' Aquaticitalea'' Xamxidin ''et al''. 2016 * '' Aquibacter'' Hameed ''et al''. 2014 * '' Aquimarina'' Ned ...
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Aestuariibaculum
''Aestuariibaculum'' is a genus from the family of Flavobacteriaceae The family Flavobacteriaceae is composed of environmental bacteria. Most species are aerobic, while some are microaerobic to anaerobic; for example ''Capnocytophaga'' and '' Coenonia''. Genera The family ''Flavobacteriaceae'' comprises the foll .... References Further reading * Flavobacteria Bacteria genera {{Flavobacteria-stub ...
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LPSN
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes The International Code of Nomenclature of Prokaryotes (ICNP) formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC) governs the scientific names for Bacteria and Archaea.P. H. A. Sneath, 2003. A short hist .... The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service. References External links List of Prokaryotic names with Standing in Nomenclature
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Aerobic Organism
Aerobic means "requiring air," in which "air" usually means oxygen. Aerobic may also refer to * Aerobic exercise, prolonged exercise of moderate intensity * Aerobics, a form of aerobic exercise * Aerobic respiration, the aerobic process of cellular respiration * Aerobic organism Aerobic means "requiring air," in which "air" usually means oxygen. Aerobic may also refer to * Aerobic exercise, prolonged exercise of moderate intensity * Aerobics Aerobics is a form of physical exercise that combines rhythmic aerobic exe ..., a living thing with an oxygen-based metabolism See also * Anaerobic (other) {{disambiguation ...
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Halotolerant
Halotolerance is the adaptation of living organisms to conditions of high salinity. Halotolerant species tend to live in areas such as hypersaline lakes, coastal dunes, saline deserts, salt marshes, and inland salt seas and springs. Halophiles are organisms that live in highly saline environments, and require the salinity to survive, while halotolerant organisms (belonging to different domains of life) can grow under saline conditions, but do not require elevated concentrations of salt for growth. Halophytes are salt-tolerant higher plants. Halotolerant microorganisms are of considerable biotechnological interest. Applications Fields of scientific research relevant to halotolerance include biochemistry, molecular biology, cell biology, physiology, ecology, and genetics. An understanding of halotolerance can be applicable to areas such as arid-zone agriculture, xeriscaping, aquaculture (of fish or algae), bioproduction of desirable compounds (such as phycobiliproteins or carotenoid ...
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Tidal Flat
Mudflats or mud flats, also known as tidal flats or, in Ireland, slob or slobs, are coastal wetlands that form in intertidal areas where sediments have been deposited by tides or rivers. A global analysis published in 2019 suggested that tidal flat ecosystems are as extensive globally as mangroves, covering at least of the Earth's surface. / They are found in sheltered areas such as bays, bayous, lagoons, and estuaries; they are also seen in freshwater lakes and salty lakes (or inland seas) alike, wherein many rivers and creeks end. Mudflats may be viewed geologically as exposed layers of bay mud, resulting from deposition of estuarine silts, clays and aquatic animal detritus. Most of the sediment within a mudflat is within the intertidal zone, and thus the flat is submerged and exposed approximately twice daily. A recent global remote sensing analysis estimated that approximately 50% of the global extent of tidal flats occurs within eight countries (Indonesia, China, Au ...
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Suncheon
Suncheon () (''Suncheon-si'') is a city in South Jeolla Province, South Korea. It is a scenic agricultural and industrial city of around 250,000 people near Suncheon Bay. It is located in the southeastern corner of Jeollanam-do, just over an hour south-east of Gwangju. Forty minutes south of Suncheon is the port city of Yeosu, and twenty minutes to the east of Suncheon is Gwangyang. It is currently experiencing strong development due to being included as part of the ''Gwangyang Bay Free Economic Zone'', one of three newly created Free Economic Zones (FEZs) in South Korea due to open within the next decade. As of October 14, 2007 plans are being set up and a referendum is being planned for a merging of the cities of Yeosu, Suncheon and Gwangyang into a new metropolitan city, taking advantage of the Gwangyang Bay Free Economic Zone, Yeosu's Expo 2012 bid and port facilities, Suncheon's educational institutes and Gwangyang's POSCO plant. History *Era of Samhan: Territory of Mahan * ...
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