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The multiregional hypothesis, multiregional evolution (MRE), or polycentric hypothesis, is a
scientific model Scientific modelling is an activity that produces models representing empirical objects, phenomena, and physical processes, to make a particular part or feature of the world easier to understand, define, quantify, visualize, or simulate. It ...
that provides an alternative explanation to the more widely accepted "Out of Africa" model of monogenesis for the pattern of
human evolution ''Homo sapiens'' is a distinct species of the hominid family of primates, which also includes all the great apes. Over their evolutionary history, humans gradually developed traits such as Human skeletal changes due to bipedalism, bipedalism, de ...
. Multiregional evolution holds that the
human Humans (''Homo sapiens'') or modern humans are the most common and widespread species of primate, and the last surviving species of the genus ''Homo''. They are Hominidae, great apes characterized by their Prehistory of nakedness and clothing ...
species first arose around two million years ago and subsequent human evolution has been within a single, continuous human species. This species encompasses all
archaic human ''Homo'' () is a genus of great ape (family Hominidae) that emerged from the genus ''Australopithecus'' and encompasses only a single extant species, ''Homo sapiens'' (modern humans), along with a number of extinct species (collectively called ...
forms such as ''
Homo erectus ''Homo erectus'' ( ) is an extinction, extinct species of Homo, archaic human from the Pleistocene, spanning nearly 2 million years. It is the first human species to evolve a humanlike body plan and human gait, gait, to early expansions of h ...
'',
Denisovans The Denisovans or Denisova hominins ( ) are an extinct species or subspecies of archaic human that ranged across Asia during the Lower Paleolithic, Lower and Middle Paleolithic, and lived, based on current evidence, from 285 thousand to 25 thou ...
, and
Neanderthal Neanderthals ( ; ''Homo neanderthalensis'' or sometimes ''H. sapiens neanderthalensis'') are an extinction, extinct group of archaic humans who inhabited Europe and Western and Central Asia during the Middle Pleistocene, Middle to Late Plei ...
s as well as modern forms, and evolved worldwide to the diverse populations of
anatomically modern humans Early modern human (EMH), or anatomically modern human (AMH), are terms used to distinguish ''Homo sapiens'' ( sometimes ''Homo sapiens sapiens'') that are anatomically consistent with the range of phenotypes seen in contemporary humans, from ...
(''
Homo sapiens Humans (''Homo sapiens'') or modern humans are the most common and widespread species of primate, and the last surviving species of the genus ''Homo''. They are Hominidae, great apes characterized by their Prehistory of nakedness and clothing ...
''). The hypothesis contends that the mechanism of clinal variation through a model of "centre and edge" allowed for the necessary balance between
genetic drift Genetic drift, also known as random genetic drift, allelic drift or the Wright effect, is the change in the Allele frequency, frequency of an existing gene variant (allele) in a population due to random chance. Genetic drift may cause gene va ...
,
gene flow In population genetics, gene flow (also known as migration and allele flow) is the transfer of genetic variation, genetic material from one population to another. If the rate of gene flow is high enough, then two populations will have equivalent ...
, and
selection Selection may refer to: Science * Selection (biology), also called natural selection, selection in evolution ** Sex selection, in genetics ** Mate selection, in mating ** Sexual selection in humans, in human sexuality ** Human mating strat ...
throughout the
Pleistocene The Pleistocene ( ; referred to colloquially as the ''ice age, Ice Age'') is the geological epoch (geology), epoch that lasted from to 11,700 years ago, spanning the Earth's most recent period of repeated glaciations. Before a change was fin ...
, as well as overall evolution as a global species, but while retaining regional differences in certain morphological features. Proponents of multiregionalism point to
fossil A fossil (from Classical Latin , ) is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserve ...
and
genomic Genomics is an interdisciplinary field of molecular biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, ...
data and continuity of
archaeological culture An archaeological culture is a recurring assemblage of types of artifacts, buildings and monuments from a specific period and region that may constitute the material culture remains of a particular past human society. The connection between thes ...
s as support for their hypothesis. The multiregional hypothesis was first proposed in 1984, and then revised in 2003. In its revised form, it is similar to the assimilation model, which holds that modern humans originated in Africa and today share a predominant recent African origin, but have also absorbed small, geographically variable, degrees of admixture from other regional ( archaic) hominin species. The multiregional hypothesis is not currently the most accepted theory of modern human origin among scientists. "The African replacement model has gained the widest acceptance owing mainly to genetic data (particularly mitochondrial DNA) from existing populations. This model is consistent with the realization that modern humans cannot be classified into subspecies or races, and it recognizes that all populations of present-day humans share the same potential." The African replacement model is also known as the "out of Africa" theory, which is currently the most widely accepted model. It proposes that ''Homo sapiens'' evolved in Africa before migrating across the world." And: "The primary competing scientific hypothesis is currently recent African origin of modern humans, which proposes that modern humans arose as a new species in Africa around 100-200,000 years ago, moving out of Africa around 50-60,000 years ago to replace existing human species such as ''Homo erectus'' and the Neanderthals without interbreeding.Wolpoff, Milford, and Caspari, Rachel (1997). Race and Human Evolution. Simon & Schuster. p. 42. This differs from the multiregional hypothesis in that the multiregional model predicts interbreeding with preexisting local human populations in any such migration."


History


Overview

The Multiregional hypothesis was proposed in 1984 by Milford H. Wolpoff, Alan Thorne and Xinzhi Wu. Wolpoff credits
Franz Weidenreich Franz Weidenreich (7 June 1873 – 11 July 1948) was a Jewish German anatomist and physical anthropologist who studied evolution. Life and career Weidenreich studied at the Kaiser-Wilhelm-Universität in Strasbourg where he earned a medica ...
's "Polycentric" hypothesis of human origins as a major influence, but cautions that this should not be confused with
polygenism Polygenism is a theory of human origins which posits the view that humans are of different origins (polygenesis). This view is opposite to the idea of monogenism, which posits a single origin of humanity. Modern scientific views find little merit ...
, or Carleton Coon's model that minimized gene flow. According to Wolpoff, multiregionalism was misinterpreted by William W. Howells, who confused Weidenreich's hypothesis with a polygenic "candelabra model" in his publications spanning five decades: Through the influence of Howells, many other anthropologists and biologists have confused multiregionalism with polygenism i.e. separate or multiple origins for different populations. Alan Templeton for example notes that this confusion has led to the error that gene flow between different populations was added to the Multiregional hypothesis as a "special pleading in response to recent difficulties", despite the fact: "parallel evolution was ''never'' part of the multiregional model, much less its core, whereas gene flow was ''not a recent addition'', but rather was present in the model from the very beginning" (emphasis in original). Despite this, multiregionalism is still confused with polygenism, or Coon's model of racial origins, from which Wolpoff and his colleagues have distanced themselves. Wolpoff has also defended Wiedenreich's Polycentric hypothesis from being labeled polyphyletic. Weidenreich himself in 1949 wrote: "I may run the risk of being misunderstood, namely that I believe in polyphyletic evolution of man". In 1998, Wu founded a China-specific Multiregional model called "Continuity with ncidentalHybridization". Wu's variant only applies the Multiregional hypothesis to the East Asian fossil record, and is popular among Chinese scientists. However, James Leibold, a political historian of modern China, has argued the support for Wu's model is largely rooted in
Chinese nationalism Chinese nationalism is a form of nationalism that asserts that the Chinese people are a nation and promotes the cultural and national unity of all Chinese people. According to Sun Yat-sen's philosophy in the Three Principles of the People, Chin ...
. Outside of China, the Multiregional hypothesis has limited support, held only by a small number of paleoanthropologists.


"Classic" vs "weak" multiregionalism

Chris Stringer Christopher Brian Stringer is a British physical anthropologist noted for his work on human evolution. Biography Growing up in a working-class family in the East End of London, Stringer first took an interest in anthropology during primary s ...
, a leading proponent of the more mainstream recent African origin theory, debated Multiregionalists such as Wolpoff and Thorne in a series of publications throughout the late 1980s and 1990s.Bräuer, G.; Stringer, C. (1997). "Models, polarization, and perspectives on modern human origins". In: ''Conceptual Issues in Modern Human Origins Research''. New York: Aldine de Gruyter. pp. 191–201. Stringer describes how he considers the original Multiregional hypothesis to have been modified over time into a weaker variant that now allows a much greater role for Africa in human evolution, including anatomical modernity (and subsequently less regional continuity than was first proposed). Stringer distinguishes the original or "classic" Multiregional model as having existed from 1984 (its formulation) until 2003, to a "weak" post-2003 variant that has "shifted close to that of the Assimilation Model".


Genetic studies

The finding that "
Mitochondrial Eve In human genetics, the Mitochondrial Eve (more technically known as the Mitochondrial-Most Recent Common Ancestor, shortened to mt-Eve or mt-MRCA) is the matrilineal most recent common ancestor (MRCA) of all living humans. In other words, she ...
" was relatively recent and African seemed to give the upper hand to the proponents of the Out of Africa hypothesis. But in 2002, Alan Templeton published a genetic analysis involving other loci in the genome as well, and this showed that some variants that are present in modern populations existed already in Asia hundreds of thousands of years ago. This meant that even if our male line (
Y chromosome The Y chromosome is one of two sex chromosomes in therian mammals and other organisms. Along with the X chromosome, it is part of the XY sex-determination system, in which the Y is the sex-determining chromosome because the presence of the ...
) and our female line (
mitochondrial DNA Mitochondrial DNA (mtDNA and mDNA) is the DNA located in the mitochondrion, mitochondria organelles in a eukaryotic cell that converts chemical energy from food into adenosine triphosphate (ATP). Mitochondrial DNA is a small portion of the D ...
) came out of Africa in the last 100,000 years or so, we have inherited other genes from populations that were already outside of Africa. Since this study other studies have been done using much more data (see
Phylogeography Phylogeography is the study of the historical processes that may be responsible for the past to present geographic distributions of genealogical lineages. This is accomplished by considering the geographic distribution of individuals in light of ge ...
).


Fossil evidence


Morphological clades

Proponents of the multiregional hypothesis see regional continuity of certain morphological traits spanning the
Pleistocene The Pleistocene ( ; referred to colloquially as the ''ice age, Ice Age'') is the geological epoch (geology), epoch that lasted from to 11,700 years ago, spanning the Earth's most recent period of repeated glaciations. Before a change was fin ...
in different regions across the globe as evidence against a single replacement model from Africa. In general, three major regions are recognized:
Europe Europe is a continent located entirely in the Northern Hemisphere and mostly in the Eastern Hemisphere. It is bordered by the Arctic Ocean to the north, the Atlantic Ocean to the west, the Mediterranean Sea to the south, and Asia to the east ...
,
China China, officially the People's Republic of China (PRC), is a country in East Asia. With population of China, a population exceeding 1.4 billion, it is the list of countries by population (United Nations), second-most populous country after ...
, and
Indonesia Indonesia, officially the Republic of Indonesia, is a country in Southeast Asia and Oceania, between the Indian Ocean, Indian and Pacific Ocean, Pacific oceans. Comprising over List of islands of Indonesia, 17,000 islands, including Sumatra, ...
(often including
Australia Australia, officially the Commonwealth of Australia, is a country comprising mainland Australia, the mainland of the Australia (continent), Australian continent, the island of Tasmania and list of islands of Australia, numerous smaller isl ...
). Wolpoff cautions that the continuity in certain skeletal features in these regions should not be seen in a racial context, instead calling them ''morphological clades''; defined as sets of traits that "uniquely characterise a geographic region". According to Wolpoff and Thorne (1981): "We do not regard a morphological clade as a unique lineage, nor do we believe it necessary to imply a particular taxonomic status for it". Critics of multiregionalism have pointed out that no single human trait is unique to a geographical region (i.e. confined to one population and not found in any other) but Wolpoff et al. (2000) note that regional continuity only recognizes combinations of features, not traits if individually accessed, a point they elsewhere compare to the forensic identification of a human skeleton: Combinations of features are "unique" in the sense of being found in only one region, or more weakly limited to one region at high frequency (very rarely in another). Wolpoff stresses that regional continuity works in conjunction with genetic exchanges between populations. Long-term regional continuity in certain morphological traits is explained by Alan Thorne's "centre and edge" population genetics model which resolves Weidenreich's paradox of "how did populations retain geographical distinctions and yet evolve together?". For example, in 2001 Wolpoff and colleagues published an analysis of character traits of the skulls of early modern human fossils in Australia and central Europe. They concluded that the diversity of these recent humans could not "result exclusively from a single late Pleistocene dispersal", and implied dual ancestry for each region, involving interbreeding with Africans.


Indonesia, Australia

Thorne held that there was regional continuity in
Indonesia Indonesia, officially the Republic of Indonesia, is a country in Southeast Asia and Oceania, between the Indian Ocean, Indian and Pacific Ocean, Pacific oceans. Comprising over List of islands of Indonesia, 17,000 islands, including Sumatra, ...
and
Australia Australia, officially the Commonwealth of Australia, is a country comprising mainland Australia, the mainland of the Australia (continent), Australian continent, the island of Tasmania and list of islands of Australia, numerous smaller isl ...
for a morphological clade. This sequence is said to consist of the earliest fossils from
Sangiran Sangiran is an archaeological excavation site in Java in Indonesia. According to a UNESCO report (1995) "Sangiran is recognized by scientists to be one of the most important sites in the world for studying fossil man, ranking alongside Zhoukou ...
, Java, that can be traced through Ngandong and found in prehistoric and recent
Aboriginal Australians Aboriginal Australians are the various indigenous peoples of the Mainland Australia, Australian mainland and many of its islands, excluding the ethnically distinct people of the Torres Strait Islands. Humans first migrated to Australia (co ...
. In 1991, Andrew Kramer tested 17 proposed morphological clade features. He found that: "a plurality (eight) of the seventeen non-metric features link Sangiran to modern Australians" and that these "are suggestive of morphological continuity, which implies the presence of a genetic continuum in Australasia dating back at least one million years" but
Colin Groves Colin Peter Groves (24 June 1942 – 30 November 2017) was a British-Australian biologist and anthropologist. Groves was professor of biological anthropology at the Australian National University in Canberra, Australia. Education Born in Englan ...
has criticized Kramer's methodology, pointing out that the polarity of characters was not tested and that the study is actually inconclusive. Phillip Habgood discovered that the characters said to be unique to the
Australasia Australasia is a subregion of Oceania, comprising Australia, New Zealand (overlapping with Polynesia), and sometimes including New Guinea and surrounding islands (overlapping with Melanesia). The term is used in a number of different context ...
n region by Thorne are
plesiomorphic In phylogenetics, a plesiomorphy ("near form") and symplesiomorphy are synonyms for an ancestral character shared by all members of a clade, which does not distinguish the clade from other clades. Plesiomorphy, symplesiomorphy, apomorphy, an ...
: Yet, regardless of these criticisms Habgood (2003) allows for limited regional continuity in Indonesia and Australia, recognizing four plesiomorphic features which do not appear in such a unique combination on fossils in any other region: a sagittally flat frontal bone, with a posterior position of minimum frontal breadth, great facial prognathism, and zygomaxillary tuberosities. This combination, Habgood says, has a "certain Australianness about it". Wolpoff, initially skeptical of Thorne's claims, became convinced when reconstructing the
Sangiran Sangiran is an archaeological excavation site in Java in Indonesia. According to a UNESCO report (1995) "Sangiran is recognized by scientists to be one of the most important sites in the world for studying fossil man, ranking alongside Zhoukou ...
17 ''Homo erectus'' skull from Indonesia, when he was surprised that the skull's face to vault angle matched that of the Australian modern human Kow Swamp 1 skull in excessive prognathism. Durband (2007) in contrast states that "features cited as showing continuity between Sangiran 17 and the Kow Swamp sample disappeared in the new, more orthognathic reconstruction of that fossil that was recently completed". Baba et al. who newly restored the face of Sangiran 17 concluded: "regional continuity in Australasia is far less evident than Thorne and Wolpoff argued".


China

Xinzhi Wu has argued for a morphological clade in China spanning the Pleistocene, characterized by a combination of 10 features. The sequence is said to start with Lantian and
Peking Man Peking Man (''Homo erectus pekinensis'', originally "''Sinanthropus pekinensis''") is a subspecies of '' H. erectus'' which inhabited what is now northern China during the Middle Pleistocene. Its fossils have been found in a cave some southw ...
, traced to Dali, to
Late Pleistocene The Late Pleistocene is an unofficial Age (geology), age in the international geologic timescale in chronostratigraphy, also known as the Upper Pleistocene from a Stratigraphy, stratigraphic perspective. It is intended to be the fourth division ...
specimens (e.g. Liujiang) and recent Chinese. Habgood in 1992 criticized Wu's list, pointing out that most of the 10 features in combination appear regularly on fossils outside China. He did though note that three combined: a non-depressed nasal root, non-projecting perpendicularly oriented nasal bones and facial flatness are unique to the Chinese region in the fossil record and may be evidence for limited regional continuity. However, according to
Chris Stringer Christopher Brian Stringer is a British physical anthropologist noted for his work on human evolution. Biography Growing up in a working-class family in the East End of London, Stringer first took an interest in anthropology during primary s ...
, Habgood's study suffered from not including enough fossil samples from North Africa, many of which exhibit the small combination he considered to be region-specific to China. Facial flatness as a morphological clade feature has been rejected by many anthropologists since it is found on many early African ''
Homo erectus ''Homo erectus'' ( ) is an extinction, extinct species of Homo, archaic human from the Pleistocene, spanning nearly 2 million years. It is the first human species to evolve a humanlike body plan and human gait, gait, to early expansions of h ...
'' fossils, and is therefore considered plesiomorphic, but Wu has responded that the form of facial flatness in the Chinese fossil record appears distinct to other (i.e. primitive) forms. Toetik Koesbardiati in her PhD thesis "On the Relevance of the Regional Continuity Features of the Face in East Asia" also found that a form of facial flatness is unique to China (i.e. only appears there at high frequency, very rarely elsewhere) but cautions that this is the only available evidence for regional continuity: "Only two features appear to show a tendency as suggested by the Multiregional model: flatness at the upper face expressed by an obtuse nasio-frontal angle and flatness at the middle part of the face expressed by an obtuse zygomaxillay angle".
Shovel-shaped incisors Shovel-shaped incisors (or, more simply, shovel incisors) are incisors whose Glossary of dentistry, lingual surfaces are scooped as a consequence of lingual marginal ridges, Crown (tooth), crown curvature, or Basal (anatomy), basal Tubercle (ana ...
are commonly cited as evidence for regional continuity in China. Stringer (1992) however found that shovel-shaped incisors are present on >70% of the early Holocene
Wadi Halfa (, , ":wikt:esparto, Esparto Valley") is a city in the Northern (state), Northern state of Sudan on the shores of Lake Nasser, Lake Nubia near the Egypt–Sudan border, border with Egypt. It is the terminus of a rail transport in Sudan, rail lin ...
fossil sample from North Africa, and common elsewhere. Frayer, et al. (1993) have criticized Stringer's method of scoring shovel-shaped incisor teeth. They discuss the fact that there are different degrees of "shovelled" e.g. trace (+), semi (++), and marked (+++), but that Stringer misleadingly lumped all these together: "...combining shoveling categories in this manner is biologically meaningless and misleading, as the statistic cannot be validly compared with the very high frequencies for the marked shoveling category reported for East Asians." Palaeoanthropologist Fred H. Smith (2009) also emphasizes that: "It is the of shoveling that identities as an East Asian regional feature, not just the occurrence of shoveling of any sort".Cartmill, M.; Smith, F. H. (2009). ''The Human Lineage''. Wiley-Blackwell. p. 450. Multiregionalists argue that marked (+++) shovel-shaped incisors only appear in China at a high frequency, and have <10% occurrence elsewhere.


Europe

Since the early 1990s, David W. Frayer has described what he regards as a morphological clade in Europe. The sequence starts with the earliest dated
Neanderthal Neanderthals ( ; ''Homo neanderthalensis'' or sometimes ''H. sapiens neanderthalensis'') are an extinction, extinct group of archaic humans who inhabited Europe and Western and Central Asia during the Middle Pleistocene, Middle to Late Plei ...
specimens (
Krapina Krapina (; ) is a town in northern Croatia and the administrative centre of Krapina-Zagorje County with a population of 4,482 (2011) and a total municipality population of 12,480 (2011). Krapina is located in the hilly Zagorje region of Croatia ...
and Saccopastore skulls) traced through the mid-
Late Pleistocene The Late Pleistocene is an unofficial Age (geology), age in the international geologic timescale in chronostratigraphy, also known as the Upper Pleistocene from a Stratigraphy, stratigraphic perspective. It is intended to be the fourth division ...
(e.g. La Ferrassie 1) to
Vindija Cave Vindija Cave is an archaeological site associated with Neanderthals and modern humans, located in the municipality of Donja Voća, northern Croatia. Remains of three Neanderthals were selected as the primary sources for the first draft sequence ...
, and late Upper Palaeolithic
Cro-Magnon Cro-Magnons or European early modern humans (EEMH) were the first early modern humans (''Homo sapiens'') to settle in Europe, migrating from western Asia, continuously occupying the continent possibly from as early as 56,800 years ago. They in ...
s or recent Europeans. Although many anthropologists consider Neanderthals and Cro Magnons morphologically distinct, Frayer maintains quite the opposite and points to their similarities, which he argues is evidence for regional continuity: Frayer et al. (1993) consider there to be at least four features in combination that are unique to the European fossil record: a horizontal-oval shaped
mandibular foramen The mandibular foramen is an opening on the internal surface of the ramus of the mandible. It allows for divisions of the mandibular nerve and blood vessels to pass through. Structure The mandibular foramen is an opening on the internal surfac ...
, anterior mastoid tubercle, suprainiac fossa, and narrowing of the nasal breadth associated with tooth-size reduction. Regarding the latter, Frayer observes a sequence of nasal narrowing in Neanderthals, following through to late Upper Palaeolithic and Holocene (Mesolithic) crania. His claims are disputed by others, but have received support from Wolpoff, who regards late Neanderthal specimens to be "transitional" in nasal form between earlier Neanderthals and later Cro Magnons. Based on other cranial similarities, Wolpoff et al. (2004) argue for a sizable Neanderthal contribution to modern Europeans. More recent claims regarding continuity in skeletal morphology in Europe focus on fossils with both Neanderthal and modern anatomical traits, to provide evidence of interbreeding rather than replacement. Examples include the '' Lapedo child'' found in Portugal and the ''Oase 1'' mandible from Peștera cu Oase, Romania, though the "Lapedo child" is disputed by some.


Genetic evidence


Mitochondrial Eve

A 1987 analysis of mitochondrial DNA from 147 people by Cann et al. from around the world indicated that their mitochondrial lineages all coalesced in a
common ancestor Common descent is a concept in evolutionary biology applicable when one species is the ancestor of two or more species later in time. According to modern evolutionary biology, all living beings could be descendants of a unique ancestor commonl ...
from Africa between 140,000 and 290,000 years ago. The analysis suggested that this reflected the worldwide expansion of modern humans as a new species, replacing, rather than mixing with, local archaic humans outside of Africa. Such a recent replacement scenario is not compatible with the Multiregional hypothesis and the mtDNA results led to increased popularity for the alternative single replacement theory. According to Wolpoff and colleagues: Multiregionalists have responded to what they see as flaws in the Eve theory, and have offered contrary genetic evidences. Wu and Thorne have questioned the reliability of the
molecular clock The molecular clock is a figurative term for a technique that uses the mutation rate of biomolecules to deduce the time in prehistory when two or more life forms diverged. The biomolecular data used for such calculations are usually nucleot ...
used to date Eve. Multiregionalists point out that Mitochondrial DNA alone can not rule out interbreeding between early modern and archaic humans, since archaic human mitochondrial strains from such interbreeding could have been lost due to
genetic drift Genetic drift, also known as random genetic drift, allelic drift or the Wright effect, is the change in the Allele frequency, frequency of an existing gene variant (allele) in a population due to random chance. Genetic drift may cause gene va ...
or a
selective sweep In genetics, a selective sweep is the process through which a new beneficial mutation that increases its frequency and becomes fixed (i.e., reaches a frequency of 1) in the population leads to the reduction or elimination of genetic variation amon ...
. Wolpoff for example states that Eve is "not the most recent common ancestor of all living people" since "Mitochondrial history is not population history".


Neanderthal mtDNA

Neanderthal
mitochondrial DNA Mitochondrial DNA (mtDNA and mDNA) is the DNA located in the mitochondrion, mitochondria organelles in a eukaryotic cell that converts chemical energy from food into adenosine triphosphate (ATP). Mitochondrial DNA is a small portion of the D ...
(
mtDNA Mitochondrial DNA (mtDNA and mDNA) is the DNA located in the mitochondria organelles in a eukaryotic cell that converts chemical energy from food into adenosine triphosphate (ATP). Mitochondrial DNA is a small portion of the DNA contained in ...
) sequences from Feldhofer and
Vindija Cave Vindija Cave is an archaeological site associated with Neanderthals and modern humans, located in the municipality of Donja Voća, northern Croatia. Remains of three Neanderthals were selected as the primary sources for the first draft sequence ...
are substantially different from modern human mtDNA. Multiregionalists however have discussed the fact that the average difference between the Feldhofer sequence and living humans is less than that found between chimpanzee subspecies, and therefore that while Neanderthals were different
subspecies In Taxonomy (biology), biological classification, subspecies (: subspecies) is a rank below species, used for populations that live in different areas and vary in size, shape, or other physical characteristics (Morphology (biology), morpholog ...
, they were still human and part of the same lineage.


Nuclear DNA

Initial analysis of
Y chromosome The Y chromosome is one of two sex chromosomes in therian mammals and other organisms. Along with the X chromosome, it is part of the XY sex-determination system, in which the Y is the sex-determining chromosome because the presence of the ...
DNA, which like mitochondrial DNA, is inherited from only one parent, was consistent with a recent African replacement model. However, the mitochondrial and Y chromosome data could not be explained by the same modern human expansion out of Africa; the Y chromosome expansion would have involved genetic mixing that retained regionally local mitochondrial lines. In addition, the Y chromosome data indicated a later expansion back into Africa from Asia, demonstrating that gene flow between regions was not unidirectional. An early analysis of 15 noncoding sites on the
X chromosome The X chromosome is one of the two sex chromosomes in many organisms, including mammals, and is found in both males and females. It is a part of the XY sex-determination system and XO sex-determination system. The X chromosome was named for its u ...
found additional inconsistencies with the recent African replacement hypothesis. The analysis found a multimodal distribution of coalescence times to the most recent common ancestor for those sites, contrary to the predictions for recent African replacement; in particular, there were more coalescence times near 2 million years ago ( mya) than expected, suggesting an ancient population split around the time
humans Humans (''Homo sapiens'') or modern humans are the most common and widespread species of primate, and the last surviving species of the genus ''Homo''. They are Hominidae, great apes characterized by their Prehistory of nakedness and clothing ...
first emerged from Africa as ''Homo erectus'', rather than more recently as suggested by the mitochondrial data. While most of these X chromosome sites showed greater diversity in Africa, consistent with African origins, a few of the sites showed greater diversity in Asia rather than Africa. For four of the 15 gene sites that did show greater diversity in Africa, the sites' varying diversity by region could not be explained by simple expansion from Africa, as would be required by the recent African replacement hypothesis. Additional discussion of these results is available in a video of a presentation given by Hammer at https://www.youtube.com/watch?v=Ff0jwWaPlnU (video) from about 40 to 50 minutes into the video. Later analyses of X chromosome and
autosomal An autosome is any chromosome that is not a sex chromosome. The members of an autosome pair in a diploid cell have the same morphology, unlike those in allosomal (sex chromosome) pairs, which may have different structures. The DNA in autosome ...
DNA continued to find sites with deep coalescence times inconsistent with a single origin of modern humans,The CMP-N-acetylneuraminic acid hydroxylase CMAH pseudogene shows 2.9 Mya coalescence time. The PDHA1 (
pyruvate dehydrogenase Pyruvate dehydrogenase is an enzyme that catalyzes the reaction of pyruvate and a lipoamide to give the acetylated dihydrolipoamide and carbon dioxide. The conversion requires the coenzyme thiamine pyrophosphate. Pyruvate dehydrogenase is ...
) locus on the X chromosome has an estimated coalescence time of 1.86 Mya, inconsistent with a recent species origin, although the worldwide lineage pattern is unlike other autosomal sites and may be consistent with recent dispersal from Africa.
A second group finds the same ancient origin for PDHA1, but finds no evidence of a recent expansion, consistent with other autosomal and X chromosome sites and contrary to mitochondrial data. The ASAH1 gene has two recently differentiated lineages with a coalescence time 2.4±.4 Mya not explainable by
balancing selection Balancing selection refers to a number of selective processes by which multiple alleles (different versions of a gene) are actively maintained in the gene pool of a population at frequencies larger than expected from genetic drift alone. Balancing ...
. The V lineage shows evidence of recent positive selection. The lineage pattern may be the result of hybridization during a recent range expansion from Africa with the V lineage tracing to archaic humans from outside Africa, though it is also consistent with a mixture of two long isolated groups within Africa; it is not consistent with a recent origination of a modern human species that replaced archaic forms without interbreeding.
diversity patterns inconsistent with a recent expansion from Africa, NAT2
SNPs In genetics and bioinformatics, a single-nucleotide polymorphism (SNP ; plural SNPs ) is a germline substitution of a single nucleotide at a specific position in the genome. Although certain definitions require the substitution to be present in ...
lineages cluster in sub-Saharan Africa, Europe, and East Asia, with genetic distances scaling with geographic distances. Also se
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or both.The NAT1 lineage tree is rooted in Eurasia with a coalescence time of 2.0 Mya that cannot be explained by balancing selection and with the NAT1*11A haplotype absent from subsaharan Africa. For example, analyses of a region of RRM2P4 (
ribonucleotide reductase Ribonucleotide reductase (RNR), also known as ribonucleoside diphosphate reductase, is an enzyme that catalyzes the formation of deoxyribonucleotides from ribonucleotides. It catalyzes this formation by removing the 2'-hydroxyl group of the ribos ...
M2 subunit
pseudogene Pseudogenes are nonfunctional segments of DNA that resemble functional genes. Pseudogenes can be formed from both protein-coding genes and non-coding genes. In the case of protein-coding genes, most pseudogenes arise as superfluous copies of fun ...
4) showed a coalescence time of about 2 Mya, with a clear root in Asia, while the
MAPT The tau proteins (abbreviated from tubulin associated unit) form a group of six highly soluble protein isoforms produced by alternative splicing from the gene ''MAPT'' (microtubule-associated protein tau). They have roles primarily in maintainin ...
locus at 17q21.31 is split into two deep genetic lineages, one of which is common in and largely confined to the present European population, suggesting inheritance from Neanderthals. In the case of the Microcephalin D allele, evidence for rapid recent expansion indicated
introgression Introgression, also known as introgressive hybridization, in genetics is the transfer of genetic material from one species into the gene pool of another by the repeated backcrossing of an interspecific hybrid with one of its parent species. Introg ...
from an archaic population. However, later analysis, including of the genomes of Neanderthals, did not find the Microcephalin D allele (in the proposed archaic species), nor evidence that it had introgressed from an archaic lineage as previously suggested. In 2001, a
DNA Deoxyribonucleic acid (; DNA) is a polymer composed of two polynucleotide chains that coil around each other to form a double helix. The polymer carries genetic instructions for the development, functioning, growth and reproduction of al ...
study of more than 12,000 men from 163 East Asian regions showed that all of them carry a mutation that originated in Africa about 35,000 to 89,000 years ago and these "data do not support even a minimal ''
in situ is a Latin phrase meaning 'in place' or 'on site', derived from ' ('in') and ' ( ablative of ''situs'', ). The term typically refers to the examination or occurrence of a process within its original context, without relocation. The term is use ...
'' hominid contribution in the origin of anatomically modern humans in East Asia". In a 2005 review and analysis of the genetic lineages of 25 chromosomal regions, Alan Templeton found evidence of more than 34 occurrences of gene flow between Africa and Eurasia. Of these occurrences, 19 were associated with continuous restricted gene exchange through at least 1.46 million years ago; only 5 were associated with a recent expansion from Africa to Eurasia. Three were associated with the original expansion of ''Homo erectus'' out of Africa around 2 million years ago, 7 with an intermediate expansion out of Africa at a date consistent with the expansion of
Acheulean Acheulean (; also Acheulian and Mode II), from the French after the type site of Saint-Acheul, is an archaeological industry of stone tool manufacture characterized by the distinctive oval and pear-shaped "hand axes" associated with ''Homo ...
tool technology, and a few others with other gene flows such as an expansion out of Eurasia and back into Africa subsequent to the most recent expansion out of Africa. Templeton rejected a hypothesis of complete recent African replacement with greater than 99% certainty ( p < 10−17).


Ancient DNA

Recent analyses of DNA taken directly from Neanderthal specimens indicates that they or their ancestors contributed to the genome of all humans outside of Africa, indicating there was some degree of interbreeding with Neanderthals before their replacement. It has also been shown that Denisova hominins contributed to the DNA of Melanesians and Australians through interbreeding. By 2006, extraction of DNA directly from some archaic human samples was becoming possible. The earliest analyses were of Neanderthal DNA, and indicated that the Neanderthal contribution to modern human genetic diversity was no more than 20%, with a most likely value of 0%. By 2010, however, detailed DNA sequencing of the Neanderthal specimens from Europe indicated that the contribution was nonzero, with Neanderthals sharing 1-4% more genetic variants with living non-Africans than with living humans in sub-Saharan Africa. In late 2010, a recently discovered non-Neanderthal archaic human, the Denisova hominin from south-western Siberia, was found to share 4–6% more of its genome with living Melanesian humans than with any other living group, supporting admixture between two regions outside of Africa. In August 2011, human leukocyte antigen (HLA) alleles from the archaic Denisovan and Neanderthal genomes were found to show patterns in the modern human population demonstrating origins from these non-African populations; the ancestry from these archaic alleles at the HLA-A site was more than 50% for modern Europeans, 70% for Asians, and 95% for Papua New Guineans. Proponents of the multiregional hypothesis believe the combination of regional continuity inside and outside of Africa and lateral gene transfer between various regions around the world supports the multiregional hypothesis. However, "Out of Africa" Theory proponents also explain this with the fact that genetic changes occur on a regional basis rather than a continental basis, and populations close to each other are likely to share certain specific regional SNPs while sharing most other genes in common.* Migration Matrix theory (A=Mt) indicates that dependent upon the potential contribution of Neanderthal ancestry, we would be able to calculate the percentage of Neanderthal mtDNA contribution to the human species. As we do not know the specific migration matrix, we are unable to input the exact data, which would answer these questions irrefutably.


See also

*
Human evolution ''Homo sapiens'' is a distinct species of the hominid family of primates, which also includes all the great apes. Over their evolutionary history, humans gradually developed traits such as Human skeletal changes due to bipedalism, bipedalism, de ...
* Human origins *
Interbreeding between archaic and modern humans Interbreeding between archaic and modern humans occurred during the Middle Paleolithic and early Upper Paleolithic. The interbreeding happened in several independent events that included Neanderthals and Denisovans, as well as several unidentifi ...
*
Mitochondrial Eve In human genetics, the Mitochondrial Eve (more technically known as the Mitochondrial-Most Recent Common Ancestor, shortened to mt-Eve or mt-MRCA) is the matrilineal most recent common ancestor (MRCA) of all living humans. In other words, she ...
* Phyletic gradualism *
Recent African origin of modern humans The recent African origin of modern humans or the "Out of Africa" theory (OOA) is the most widely accepted paleoanthropology, paleo-anthropological model of the geographic origin and Early human migrations, early migration of early modern h ...
*
Y-chromosomal Adam In human genetics, the Y-chromosomal Adam (more technically known as the Y-chromosomal most recent common ancestor, shortened to Y-MRCA), is the patrilineal most recent common ancestor (MRCA) from whom all currently living humans are descended. ...


References


Further reading

*


External links


Templeton's lattice diagram showing major gene flows graphically
Via Conrante.com. * Notes on drift and migration with equations for calculating the effects on allele frequencies of different populations. Vi

. *
Human Evolution
(2011). '' Britannica.com''.
Plural Lineages in the Human mtDNA Genome
Via Rafonda.com.
Human Timeline (Interactive)
(August 2016).
Smithsonian Institution The Smithsonian Institution ( ), or simply the Smithsonian, is a group of museums, Education center, education and Research institute, research centers, created by the Federal government of the United States, U.S. government "for the increase a ...
,
National Museum of Natural History The National Museum of Natural History (NMNH) is a natural history museum administered by the Smithsonian Institution, located on the National Mall in Washington, D.C., United States. It has free admission and is open 364 days a year. With 4.4 ...
. {{Portal bar, Evolutionary biology Anatomically modern humans Biological hypotheses Human evolution Race (human categorization) 1984 introductions es:Poligenismo id:Asal-usul multiregional manusia modern