''Clavibacter sepedonicus'' is a species of
bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
in the genus ''
Clavibacter
''Clavibacter'' is a genus of aerobic Gram-positive
In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories ...
''.
''C. sepedonicus'' is a high-profile alien plant pathogen of A2
Quarantine
A quarantine is a restriction on the movement of people, animals and goods which is intended to prevent the spread of disease or pests. It is often used in connection to disease and illness, preventing the movement of those who may have been ...
status affecting only potatoes. It causes a disease in potatoes known as 'ring rot' due to the way it rots vascular tissue inside potato tubers It is present in parts of
Europe
Europe is a large peninsula conventionally considered a continent in its own right because of its great physical size and the weight of its history and traditions. Europe is also considered a subcontinent of Eurasia and it is located enti ...
but is under statutory control under '
Council Directive
A directive is a legal act of the European Union that requires member states to achieve a particular result without dictating the means of achieving that result. Directives first have to be enacted into national law by member states before thei ...
93/85/EEC' of 4 October 1993 on the control of potato ring rot. This means that if an outbreak occurs, the outbreak must be controlled and if possible the disease has to be eradicated. If necessary, prohibitions are put into place to prevent further spread.
A plant showing symptoms of ring rot should be reported to the local plant health authority.
Hosts and symptoms
''C. sepidonicus'' is an economically important pathogen because it affects only potato, which was the 12th highest ranking commodity in 2009, generating $44,128,413,000 globally.
[Food and Agriculture Organization of the United Nations. http://faostat.fao.org/site/339/default.aspx] Like all bacteria in the genus ''Clavibacter'', ''C. sepidonicus'' causes a systemic vascular infection by invading the xylem vessels and multiplying there which sometimes leads to plugged xylem vessels. When diagnosing a ''C. sepidonicus'' infection in potato, look for discoloration of the vascular ring within the tuber that has been described as "glassy" or "water-soaked" with the ooze inside having a "cheese-like consistency".
[Evtushenko LI, Takeuchi M. 2006. The family Microbacteriaceae. In "The Prokaryotes", 3rd edition, ed. M Dworkin, S Falkow, E Rosenburg, KH Schleifer, E Stackenbrandt, 3:1020–99. New York: Springer]
Symptoms of potato 'ring rot' are yellowing of the leaf margins which later turn brown and look like they are burned.
Tuber
Tubers are a type of enlarged structure used as storage organs for nutrients in some plants. They are used for the plant's perennation (survival of the winter or dry months), to provide energy and nutrients for regrowth during the next growin ...
s rot from the inside, sometimes progressing to leave hollow shells. Rotting of the tubers is the more common symptom. Infected land cannot be used again for susceptible crops for several years. Among others,
United States
The United States of America (U.S.A. or USA), commonly known as the United States (U.S. or US) or America, is a country primarily located in North America. It consists of 50 U.S. state, states, a Washington, D.C., federal district, five ma ...
,
Canada
Canada is a country in North America. Its ten provinces and three territories extend from the Atlantic Ocean to the Pacific Ocean and northward into the Arctic Ocean, covering over , making it the world's second-largest country by tota ...
, many
EU states and
Middle East
The Middle East ( ar, الشرق الأوسط, ISO 233: ) is a geopolitical region commonly encompassing Arabia (including the Arabian Peninsula and Bahrain), Asia Minor (Asian part of Turkey except Hatay Province), East Thrace (Europ ...
ern countries have not yet been able to eradicate this pathogen.
Disease cycle
The causal agent of Ring Rot of Potato overwinters many different ways. The bacteria survives in infected tubers in both storage and in the field. Diseased tubers then infect newly planted tubers. The bacterium also may be foundas dried slime on machinery or containers. For instance, if a knife cuts into an infected tuber, the next 20 tubers that the knife cuts have a high risk of becoming infected.
The bacteria enters the host through wounds and invades the xylem where it multiplies via
binary fission
Binary may refer to:
Science and technology Mathematics
* Binary number, a representation of numbers using only two digits (0 and 1)
* Binary function, a function that takes two arguments
* Binary operation, a mathematical operation that ta ...
. If colonization is successful, the bacteria may plug the xylem vessels. In advanced stages of infection, the bacteria will move out of the vessels and break down the surrounding
parenchyma
Parenchyma () is the bulk of functional substance in an animal organ or structure such as a tumour. In zoology it is the name for the tissue that fills the interior of flatworms.
Etymology
The term ''parenchyma'' is New Latin from the word π ...
tissue before moving into new vessels. The bacteria may also invade the roots and cause them to deteriorate.
[Agrios, George N (2005). ''Plant Pathology'', Burlington, MA: Elsevier Academic Press. .]
''C. sepidonicus'' spreads by contaminated soil, surfaces, infected seed, wash waters, infected potato waste, etc. It can survive on warehouse walls, boxes, bags etc. On machinery in dry conditions, it can survive at least a month – sometimes in the form of dried bacterial ooze. It is also able to overwinter in soil in association with plant debris. ''C. sepidonicus'' will only survive in the soil as long as the host tissue in which it resides persists and resists decomposition by
saprophytic
Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi ( ...
microorganisms in the soil. This poor ability to compete as a saprophyte in the absence of a susceptible host makes ''Clavibacter'' sp. known as soil invaders as opposed to soil inhabitants.
Environment
North, Northwest and Central Europe have favorable climates for virulence. The disease multiplies rapidly and survives longer in cooler environments around 21 °C. At favorable conditions, the pathogen can survive 63 months in infected potato stems and 18 months in
burlap sacks.
Management
In the UK,
DEFRA DEFRA may refer to:
* Deficit Reduction Act of 1984 The Deficit Reduction Act of 1984 (), also known as the DEFRA, was a federal law enacted in the United States in 1984. Originally part of the stalled Tax Reform Act of 1983, it was adjusted and re ...
Plant Health and Seed Inspectors
Plants are predominantly photosynthetic eukaryotes of the kingdom Plantae. Historically, the plant kingdom encompassed all living things that were not animals, and included algae and fungi; however, all current definitions of Plantae exclude ...
(PHSI) and
SEERAD carry out annual survey work on ware and
seed potato
The potato is a starchy food, a tuber of the plant ''Solanum tuberosum'' and is a root vegetable native to the Americas. The plant is a perennial in the nightshade family Solanaceae.
Wild potato species can be found from the southern Unite ...
es. Samples are sent to the
Fera Science
Fera Science, formerly the Food and Environment Research Agency, is a UK research organisation. It is a joint private/public sector venture between Capita plc and the UK Government (Defra).
History
The Food and Environment Research Agency (FER ...
which was formerly known as The Central Science Laboratory (for
England
England is a country that is part of the United Kingdom. It shares land borders with Wales to its west and Scotland to its north. The Irish Sea lies northwest and the Celtic Sea to the southwest. It is separated from continental Europe ...
and
Wales
Wales ( cy, Cymru ) is a Countries of the United Kingdom, country that is part of the United Kingdom. It is bordered by England to the Wales–England border, east, the Irish Sea to the north and west, the Celtic Sea to the south west and the ...
) and to
Scottish Agricultural Science Agency
SASA (formerly the Scottish Agricultural Science Agency) is a division of the Scottish Government Agriculture and Rural Delivery Directorate. It provides scientific advice and support on a range of agricultural and environmental topics to the ...
(SASA) (for
Scotland
Scotland (, ) is a country that is part of the United Kingdom. Covering the northern third of the island of Great Britain, mainland Scotland has a border with England to the southeast and is otherwise surrounded by the Atlantic Ocean to th ...
) for latent infection testing (infected but not showing symptoms). Infected crops once identified are intercepted, impounded, and destroyed. additional text. In the EU, quarantine facilities and licences are required to obtain, hold, and/or work with the bacteria and in the
UK,
Department of Trade and Industry (DTI) export licences are required to export it to countries outside of the EU whether through a third party country or not. The last known outbreak in the UK was in August 2004.
[, CABI and EPPO for the EU. "''Clavibacter michiganensis'' subsp. ''michiganensis''", ''EPPO quarantine pest''. Retrieved on 2011-10-26.]
There are no chemicals to treat ring rot of potato. There are no resistant varieties either. If a tuber tests positive for ''Clavibacter sepidonicus'', proper authorities should be immediately contacted as this is a quarantine disease in the United States as well Europe.
[(2009). Bacterial rots of potato tubers. Retrieved from United Kingdom Food and Environment Research Agency website: http://www.fera.defra.gov.uk/plants/publications/documents/factsheets/bacterialRotsPotato.pdf ]
Subsp. ''sepidonicus'' presents a danger of long-distance dispersal due to its ability to survive in seeds.
[Bugbee WM, Gudmestad NC. 1988. The recovery of Corneybacterium sepidonicum from sugarbeet seed. Phytopathology 78:205-8]
References
{{Taxonbar, from=Q62855968
Microbacteriaceae
Bacteria described in 1914