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Symbiomycota
Symbiomycota is a clade of fungi containing both Glomeromycota and Dikarya. It includes all mycorrhizal fungi except '' Endogone'' and the Mucoromycotina fine root endophytes, which both belong in Mucoromycota. Symbiomycota is supported by phylogenetic analyses based on ribosomal DNA and rpb2 data but not from rpb1 data. More recent analyses using genome-scale, multilocus protein sequence data have either recovered this clade or have failed to recover it, with Glomeromycota falling within Mucoromycota instead (forming Mucoromyceta). Etymology The name references symbiosis Symbiosis (Ancient Greek : living with, companionship < : together; and ''bíōsis'': living) is any type of a close and long-term biological interaction, between two organisms of different species. The two organisms, termed symbionts, can fo ...
due to the inclusion of most mycorrhizal fungi within this clade.


Taxonomy

The following
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Fungi By Classification
A fungus (: fungi , , , or ; or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as one of the traditional eukaryotic kingdoms, along with Animalia, Plantae, and either Protista or Protozoa and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related organisms, named the ''Eumycota'' (''true fungi'' or ''Eumycete ...
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Fungi
A fungus (: fungi , , , or ; or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and mold (fungus), molds, as well as the more familiar mushrooms. These organisms are classified as one of the kingdom (biology)#Six kingdoms (1998), traditional eukaryotic kingdoms, along with Animalia, Plantae, and either Protista or Protozoa and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of motility, mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related o ...
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Eumycota
A fungus (: fungi , , , or ; or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as one of the traditional eukaryotic kingdoms, along with Animalia, Plantae, and either Protista or Protozoa and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related organisms, named the ''Eumycota'' (''true fungi'' or ...
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Amastigomycota
Amastigomycota or Eufungi is a clade of fungi. It includes all fungi without flagella or centrioles, and with unstacked Golgi apparatus cisternae. Members of this clade are Dikarya and the traditional paraphyletic assemblage "Zygomycota", now divided into several monophyletic phyla. Classifications Cavalier-Smith (1981) * Kingdom (or Subkingdom) Eufungi ** Phylum Hemiascomycota ** Phylum Ustomycota ** Phylum Zygomycota ** Phylum Ascomycota ** Phylum Uredomycota ** Phylum Basidiomycota Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ... At the time, the monophyly of Fungi (Eumycota) was not fully certain. Cavalier-Smith considered one scenario where Eufungi could be ancestral or basal to other eukaryotes due to their relatively simple cytology and small genome, though he favo ...
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Rozellomycota
Cryptomycota ('hidden fungi'), Rozellida, or Rozellomycota are a clade of micro-organisms that are either fungi or a sister group to fungi. They differ from classical fungi in that they lack chitinous cell walls at any trophic stage in their lifecycle, as reported by Jones and colleagues in 2011. Despite their unconventional phagocytic feeding habits (typical fungi are osmotrophic), chitin has been observed in the inner layer of resting spores, and in immature resting spores for some species of '' Rozella'', as indicated with calcofluor-white stain as well as the presence of a fungal-specific chitin synthase gene. History Formation of the Rozelida concept Rozellida were first detected as DNA sequences retrieved from a freshwater laboratory enclosure. Phylogenetic analysis of these sequences formed a unique terminal clade of then unknown affiliation provisionally called after the first clone in the clade: LKM11. The term "Rozellida" was coined in 2010, as it was found t ...
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Current Biology
''Current Biology'' is a biweekly peer-reviewed scientific journal that covers all areas of biology, especially molecular biology, cell biology, genetics, neurobiology, ecology, and evolutionary biology. The journal includes research articles, various types of review articles, as well as an editorial magazine section. The journal was established in 1991 by the Current Science group, was acquired by Elsevier in 1998, and has since 2001 been part of Cell Press, a subdivision of Elsevier. According to '' Journal Citation Reports'', the journal has a 2020 impact factor of 10.834. It was categorized as a "high impact journal" by the Superfund Research Program. References External links * Biology journals English-language journals Cell Press academic journals Academic journals established in 1991 Biweekly journals {{biology-journal-stub ...
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Basidiomycota
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basidiomycota includes these groups: agarics, puffballs, stinkhorns, bracket fungi, other polypores, jelly fungi, boletes, chanterelles, earth stars, smuts, bunts, rusts, mirror yeasts, and '' Cryptococcus'', the human pathogenic yeast. Basidiomycota are filamentous fungi composed of hyphae (except for basidiomycota-yeast) and reproduce sexually via the formation of specialized club-shaped end cells called basidia that normally bear external meiospores (usually four). These specialized spores are called basidiospores. However, some Basidiomycota are obligate asexual reproducers. Basidiomycota that reproduce asexually (discussed below) can typically be recognized as members of this division by gross similarity to others, by ...
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Ascomycota
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defining feature of this fungal group is the "ascus" (), a microscopic sexual reproduction, sexual structure in which nonmotile spores, called ascospores, are formed. However, some species of Ascomycota are Asexual reproduction, asexual and thus do not form asci or ascospores. Familiar examples of sac fungi include morels, truffles, yeast#Beer, brewers' and bakers' yeast, Xylaria, dead man's fingers, and cup fungi. The fungal symbionts in the majority of lichens (loosely termed "ascolichens") such as ''Cladonia'' belong to the Ascomycota. Ascomycota is a monophyletic group (containing all of the descendants of a common ancestor). Previously placed in the Basidiomycota along with asexual species from other fungal taxa, asexual (or Teleomorph, ...
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Entorrhizomycota
Entorrhizomycetes is the sole class in the phylum Entorrhizomycota, within the Fungi subkingdom Dikarya along with Basidiomycota and Ascomycota. It contains three genera and is a small group of teliosporic root parasites that form galls on plants in the Juncaceae (rush) and Cyperaceae (sedge) families. Prior to 2015 this phylum was placed under the subdivision Ustilaginomycotina. A 2015 study did a "comprehensive five-gene analyses" of Entorrhiza and concluded that the former class Entorrhizomycetes is possibly either a close sister group to the rest of Dikarya or Basidiomycota. Taxonomy Taxonomy based on the work of Wijayawardene et al. 2019. * Order Talbotiomycetales Riess et al. 2015 **''Family Talbotiomycetaceae'' Riess et al. 2015 *** Genus '' Talbotiomyces'' Vánky, Bauer & Begerow 2007 * Order Entorrhizales Bauer & Oberwinkler 1997 **''Family Entorrhizaceae'' Bauer & Oberwinkler 1997 *** Genus '' Juncorrhiza'' Riess & Piątek 2019 *** Genus '' Entorrhiza'' Weber 1884 ' ...
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Zoopagomycota
The Zoopagomycotina are a subdivision (''incertae sedis'') of the fungal division Zygomycota ''sensu lato''. It contains 5 families and 20 genera.ygomycetes.orgurl=http://zygomycetes.org/index.php?id=8 Relationships among and within subphyla of Zygomycota are poorly understood, and their remains in question, so they are sometimes referred to by the informal name . Zoopagomycotina are microscopic and are typically

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Blastocladiomycota
Blastocladiomycota is one of the currently recognized phyla within the kingdom Fungi.Hibbett DS et al. 2007. A higher-level phylogenetic classification of the fungi. Mycological Research 111:509–47. Blastocladiomycota was originally the order Blastocladiales within the phylum Chytridiomycota until molecular and zoospore ultrastructural characters were used to demonstrate it was not monophyletic with Chytridiomycota. The order was first erected by Petersen for a single genus, ''Blastocladia'', which was originally considered a member of the oomycetes.Sparrow FK. 1960. Aquatic phycomycetes. 2nd ed. Ann Arbor, Michigan: University of Michigan Press. Accordingly, members of Blastocladiomycota are often referred to colloquially as "chytrids." However, some feel "chytrid" should refer only to members of Chytridiomycota.Alexopoulos CJ, Mims CW, Blackwell M. 1996. Introductory Mycology. 4th edition. John Wiley & Sons, Inc. Thus, members of Blastocladiomycota are commonly called "blast ...
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Neocallimastigomycota
Neocallimastigomycota is a phylum containing anaerobic fungi, which are symbionts found in the digestive tracts of larger herbivores. Anaerobic fungi were originally placed within phylum Chytridiomycota, within Order Neocallimastigales but later raised to phylum level, a decision upheld by later phylogenetic reconstructions. It encompasses only one family. Discovery The fungi in Neocallimastigomycota were first recognised as fungi by Orpin in 1975, based on motile cells present in the rumen of sheep. Their zoospores had been observed much earlier but were believed to be flagellate protists, but Orpin demonstrated that they possessed a chitin cell wall. It has since been shown that they are fungi related to the core chytrids. Prior to this, the microbial population of the rumen was believed to consist only of bacteria and protozoa. Since their discovery they have been isolated from the digestive tracts of over 50 herbivores, including ruminant and non-ruminant (hindgut-ferme ...
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