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Supraprimates
Euarchontoglires (from: ''Euarchonta'' ("true rulers") + ''Glires'' ("dormice")), synonymous with Supraprimates, is a clade and a superorder of placental mammals, the living members of which belong to one of the five following groups: rodents, lagomorphs, treeshrews, primates, and colugos. Evolutionary affinities within mammals The Euarchontoglires clade is based on DNA sequence analyses and retrotransposon markers that combine the clades Glires (Rodentia + Lagomorpha) and Euarchonta (Scandentia + Primates + Dermoptera). It is usually discussed without a taxonomic rank but has been called a cohort, magnorder, or superorder. Relations among the four cohorts (Euarchontoglires, Xenarthra, Laurasiatheria, Afrotheria) and the identity of the placental root remain controversial. So far, few, if any, distinctive anatomical features have been recognized that support Euarchontoglires; nor does any strong evidence from anatomy support alternative hypotheses. Although both Euarchontoglire ...
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Primatomorpha
Primatomorpha is a proposed mirorder of mammals containing the orders Dermoptera (or colugos) and Primates. Primatomorpha is sister to Scandentia, together forming the Euarchonta. The term "Primatomorpha" first appeared in the general scientific literature in 1991 (K.C. Beard) and 1992 (Kalandadze, Rautian). Major DNA sequence analyses of predominantly nuclear sequences (Murphy et al., 2001) support the Euarchonta hypothesis, while a major study investigating mitochondrial sequences supports a different tree topology (Arnason et al., 2002). A study investigating retrotransposon presence/absence data has claimed strong support for Euarchonta (Kriegs et al., 2007). Some interpretations of the molecular data link Primates and Dermoptera in a clade In biology, a clade (), also known as a Monophyly, monophyletic group or natural group, is a group of organisms that is composed of a common ancestor and all of its descendants. Clades are the fundamental unit of cladistics, a ...
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Glires
Glires (, Latin ''glīrēs'' 'dormice') is a clade (sometimes ranked as a grandorder) consisting of rodents and lagomorphs ( rabbits, hares, and pikas). The hypothesis that these form a monophyletic group has been long debated based on morphological evidence. Two morphological studies, published in 2001 and 2003, strongly support the monophyly of Glires. In particular, the 2003 study reported the discovery of fossil material of basal members of Glires, particularly the genera '' Mimotona'', '' Gomphos'', '' Heomys'', '' Matutinia'', '' Rhombomylus'', and '' Sinomylus''. Their description, in 2005, helped to bridge the gap between more typical rodents and lagomorphs. Data published in 2001, based on nuclear DNA, supported Glires as a sister of Euarchonta to form Euarchontoglires, but some genetic data from both nuclear and mitochondrial DNA Mitochondrial DNA (mtDNA and mDNA) is the DNA located in the mitochondrion, mitochondria organelles in a eukaryotic cell that c ...
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Euarchonta
The Euarchonta are a proposed grandorder of mammals: the order Scandentia (treeshrews), and its sister Primatomorpha mirorder, containing the Dermoptera (colugos) and the primates (Plesiadapiformes and descendants). The term "Euarchonta" (meaning "true rulers") appeared in 1999, when molecular evidence suggested that the morphology-based Archonta should be trimmed down to exclude Chiroptera. Further DNA sequence analyses supported the Euarchonta hypothesis. Despite multiple papers pointing out that some mitochondrial sequences showed unusual properties (particularly murid rodents and hedgehogs) and were likely distorting the overall tree, and despite earlier studies showing near total congruence of mtDNA-based and nuclear-based trees when such sequences were excluded, some authors continued to produce misleading trees. A study investigating retrotransposon presence/absence data has claimed strong support for Euarchonta. Some interpretations of the molecular data link Primates ...
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Treeshrew
The treeshrews (also called tree shrews or banxrings) are small mammals native to the tropical forests of South and Southeast Asia. They make up the entire order Scandentia (from Latin ''scandere'', "to climb"), which split into two families: the Tupaiidae (19 species, "ordinary" treeshrews), and the Ptilocercidae (one species, the pen-tailed treeshrew). Though called 'treeshrews', and despite having previously been classified in Insectivora, they are not true shrews, and not all species live in trees. They are omnivores; among other things, treeshrews eat fruit. As fellow members of Euarchonta, treeshrews are closely related to primates, and have been used as an alternative to primates in experimental studies of myopia, psychosocial stress, and hepatitis. Description Treeshrews are slender animals with long tails and soft, greyish to reddish-brown fur. The terrestrial species tend to be larger than the arboreal forms, and to have larger claws, which they use for digging up ...
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Brown Rat
The brown rat (''Rattus norvegicus''), also known as the common rat, street rat, sewer rat, wharf rat, Hanover rat, Norway rat and Norwegian rat, is a widespread species of common rat. One of the largest Muroidea, muroids, it is a brown or grey rodent with a body length of up to long, and a tail slightly shorter than that. It weighs between . Thought to have originated in northern China and neighbouring areas, this rodent has now spread to all continents except Antarctica, and is the dominant rat in Europe and much of North America, having become Naturalisation (biology), naturalised across the world. With rare exceptions, the brown rat lives wherever humans live, particularly in urban areas. They are omnivorous, reproduce rapidly, and can serve as a vector for several human diseases. Selective breeding of the brown rat has produced the fancy rat (rats kept as pets), as well as the laboratory rat (rats used as model organisms in biological research). Both fancy rats and laborato ...
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Colugo
Colugos (), flying lemurs, or cobegos (), are arboreal gliding euarchontogliran mammals that are native to Southeast Asia. Their closest evolutionary relatives are primates. There are just two living species of colugos: the Sunda flying lemur (''Galeopterus variegatus'') and the Philippine flying lemur (''Cynocephalus volans''). These two species make up the entire family Cynocephalidae () and order Dermoptera, from Ancient Greek δέρμα (''dérma'') "skin" and πτερόν (''pterón'') "wing". Characteristics Colugos are nocturnal, tree-dwelling mammals. Appearance and anatomy They reach lengths of and weigh . They have long, slender front and rear limbs, a medium-length tail, and a relatively light build. The head is small, with large, front-focused eyes for excellent binocular vision, and small rounded ears. The incisor teeth of colugos are highly distinctive; they are comb-like in shape with up to 20 tines on each tooth. The incisors are analogous in app ...
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Retrotransposon
Retrotransposons (also called Class I transposable elements) are mobile elements which move in the host genome by converting their transcribed RNA into DNA through reverse transcription. Thus, they differ from Class II transposable elements, or DNA transposons, in utilizing an RNA intermediate for the transposition and leaving the transposition donor site unchanged. Through reverse transcription, retrotransposons amplify themselves quickly to become abundant in eukaryotic genomes such as maize (49–78%) and humans (42%). They are only present in eukaryotes but share features with retroviruses such as HIV, for example, discontinuous reverse transcriptase-mediated extrachromosomal recombination. There are two main types of retrotransposons, long terminal repeats (LTRs) and non-long terminal repeats (non-LTRs). Retrotransposons are classified based on sequence and method of transposition. Most retrotransposons in the maize genome are LTR, whereas in humans they are mostly non-L ...
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Retrotransposon Marker
Retrotransposon markers are components of DNA which are used as cladistic markers. They assist in determining the common ancestry, or not, of related taxa. The "presence" of a given retrotransposon in related taxa suggests their orthologous integration, a derived condition acquired via a common ancestry, while the "absence" of particular elements indicates the plesiomorphic condition prior to integration in more distant taxa. The use of presence/absence analyses to reconstruct the systematic biology of mammals depends on the availability of retrotransposons that were actively integrating before the divergence of a particular species. Details The analysis of SINEs – Short INterspersed Elements – LINEs – Long INterspersed Elements – or truncated LTRs – Long Terminal Repeats – as molecular cladistic markers represents a particularly interesting complement to DNA sequence and morphological data. The reason for this is that retrotransposons are assumed to represent pow ...
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Science (journal)
''Science'' is the peer review, peer-reviewed academic journal of the American Association for the Advancement of Science (AAAS) and one of the world's top academic journals. It was first published in 1880, is currently circulated weekly and has a subscriber base of around 130,000. Because institutional subscriptions and online access serve a larger audience, its estimated readership is over 400,000 people. ''Science'' is based in Washington, D.C., United States, with a second office in Cambridge, UK. Contents The major focus of the journal is publishing important original scientific research and research reviews, but ''Science'' also publishes science-related news, opinions on science policy and other matters of interest to scientists and others who are concerned with the wide implications of science and technology. Unlike most scientific journals, which focus on a specific field, ''Science'' and its rival ''Nature (journal), Nature'' cover the full range of List of academ ...
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Taxonomic Rank
In biology, taxonomic rank (which some authors prefer to call nomenclatural rank because ranking is part of nomenclature rather than taxonomy proper, according to some definitions of these terms) is the relative or absolute level of a group of organisms (a ''taxon'') in a hierarchy that reflects evolutionary relationships. Thus, the most inclusive clades (such as Eukarya and Animalia) have the highest ranks, whereas the least inclusive ones (such as ''Homo sapiens'' or ''Bufo bufo'') have the lowest ranks. Ranks can be either relative and be denoted by an indented taxonomy in which the level of indentation reflects the rank, or absolute, in which various terms, such as species, genus, Family (biology), family, Order (biology), order, Class (biology), class, Phylum (biology), phylum, Kingdom (biology), kingdom, and Domain (biology), domain designate rank. This page emphasizes absolute ranks and the rank-based codes (the International Code of Zoological Nomenclature, Zoological Code, ...
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Xenarthra
Xenarthra (; from Ancient Greek ξένος, xénos, "foreign, alien" + ἄρθρον, árthron, "joint") is a superorder and major clade of placental mammals native to the Americas. There are 31 living species: the anteaters, tree sloths, and armadillos. Extinct xenarthrans include the glyptodonts, pampatheres and ground sloths. Xenarthrans originated in South America during the late Paleocene about 60 million years ago. They evolved and diversified extensively in South America during the continent's long period of isolation in the early to mid Cenozoic Era. They spread to the Antilles by the early Miocene and, starting about 3 million years ago, spread to Central and North America as part of the Great American Interchange. Nearly all of the formerly abundant megafaunal xenarthrans became extinct at the end of the Pleistocene. Characteristics Xenarthrans share several characteristics that are not present in other placental mammals, which suggest that xenarthrans desce ...
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