Guillardia
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Guillardia
''Guillardia'' is a genus of marine biflagellate cryptomonad algae with a plastid obtained through secondary endosymbiosis of a red alga. Originally identified in Connecticut by Richard Guillard in the 1960s, ''Guillardia'' only has one described species. The genus is rare in the wild, but cultures well and has been frequently studied since its original discovery. The general morphology of the small cell is well described, and shares many similarities with other cryptomonads, though it contains a unique organization of periplasm. ''Guillardia'' is the only cryptomonad to have its entire nucleus, nucleomorph, and plastid genome sequenced. This knowledge has prompted further studies on gene transfer between chloroplast, the ancestral red algal nucleomorph, and the nucleus, as well as regulation of photosynthetic and cell cycle gene expression within the plastid. The genus is also important in research across biological disciplines; ''Guillardia'' serves as a model organism in ...
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Guillardia Theta
''Guillardia'' is a genus of marine biflagellate cryptomonad algae with a plastid obtained through secondary endosymbiosis of a red alga. Originally identified in Connecticut by Richard Guillard in the 1960s, ''Guillardia'' only has one described species. The genus is rare in the wild, but cultures well and has been frequently studied since its original discovery. The general morphology of the small cell is well described, and shares many similarities with other cryptomonads, though it contains a unique organization of periplasm. ''Guillardia'' is the only cryptomonad to have its entire nucleus, nucleomorph, and plastid genome sequenced. This knowledge has prompted further studies on gene transfer between chloroplast, the ancestral red algal nucleomorph, and the nucleus, as well as regulation of photosynthetic and cell cycle gene expression within the plastid. The genus is also important in research across biological disciplines; ''Guillardia'' serves as a model organism in the s ...
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Nucleomorph
Nucleomorphs are small, vestigial eukaryotic nuclei found between the inner and outer pairs of membranes in certain plastids. They are thought to be vestiges of red and green algal nuclei that were engulfed by a larger eukaryote. Because the nucleomorph lies between two sets of membranes, nucleomorphs support the endosymbiotic theory and are evidence that the plastids containing them are complex plastids. Having two sets of membranes indicate that the plastid, a prokaryote, was engulfed by a eukaryote, an alga, which was then engulfed by another eukaryote, the host cell, making the plastid an example of secondary endosymbiosis. Organisms with known nucleomorphs As of 2007, only two monophyletic groups of organisms are known to contain plastids with a vestigial nucleus or nucleomorph: the cryptomonads of the supergroup Cryptista and the chlorarachniophytes of the supergroup Rhizaria, both of which have examples of sequenced nucleomorph genomes. Studies of the genomic organiza ...
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Optogenetics
Optogenetics is a biological technique to control the activity of neurons or other cell types with light. This is achieved by Gene expression, expression of Channelrhodopsin, light-sensitive ion channels, Halorhodopsin, pumps or Photoactivated adenylyl cyclase, enzymes specifically in the target cells. On the level of individual Cell (biology), cells, Photoactivated adenylyl cyclase, light-activated enzymes and transcription factors allow precise control of biochemical signaling pathways. In Neuroscience, systems neuroscience, the ability to control the activity of a genetically defined set of neurons has been used to understand their contribution to decision making, learning, fear memory, mating, addiction, feeding, and locomotion. In a first medical application of optogenetic technology, vision was partially restored in a blind patient with Retinitis pigmentosa. Optogenetic techniques have also been introduced to map the Brain connectivity estimators, functional connectivity of t ...
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Cryptomonad
The cryptomonads (or cryptophytes) are a superclass of algae, most of which have plastids. They are traditionally considered a division of algae among phycologists, under the name of Cryptophyta. They are common in freshwater, and also occur in marine and brackish habitats. Each cell is around 10–50 μm in size and flattened in shape, with an anterior groove or pocket. At the edge of the pocket there are typically two slightly unequal flagella. Some may exhibit mixotrophy. They are classified as superclass Cryptomonada, which is divided into two classes: heterotrophic Goniomonadea and phototrophic Cryptophyceae. The two groups are united under three shared morphological characteristics: presence of a periplast, ejectisomes with secondary scroll, and mitochondrial cristae with flat tubules. Genetic studies as early as 1994 also supported the hypothesis that ''Goniomonas'' was sister to Cryptophyceae. A study in 2018 found strong evidence that the common ancestor of Crypto ...
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Symbiogenesis
Symbiogenesis (endosymbiotic theory, or serial endosymbiotic theory) is the leading evolutionary theory of the origin of eukaryotic cells from prokaryotic organisms. The theory holds that mitochondria, plastids such as chloroplasts, and possibly other organelles of eukaryotic cells are descended from formerly free-living prokaryotes (more closely related to the Bacteria than to the Archaea) taken one inside the other in endosymbiosis. Mitochondria appear to be phylogenetically related to Rickettsiales bacteria, while chloroplasts are thought to be related to cyanobacteria. The idea that chloroplasts were originally independent organisms that merged into a symbiotic relationship with other one-celled organisms dates back to the 19th century, when it was espoused by researchers such as Andreas Schimper. The endosymbiotic theory was articulated in 1905 and 1910 by the Russian botanist Konstantin Mereschkowski, and advanced and substantiated with microbiological evidence by Lyn ...
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Marsh
In ecology, a marsh is a wetland that is dominated by herbaceous plants rather than by woody plants.Keddy, P.A. 2010. Wetland Ecology: Principles and Conservation (2nd edition). Cambridge University Press, Cambridge, UK. 497 p More in general, the word can be used for any low-lying and seasonally waterlogged terrain. In Europe and in agricultural literature low-lying meadows that require draining and embanked polderlands are also referred to as marshes or marshland. Marshes can often be found at the edges of lakes and streams, where they form a transition between the aquatic and terrestrial ecosystems. They are often dominated by grasses, rushes or reeds. If woody plants are present they tend to be low-growing shrubs, and the marsh is sometimes called a carr. This form of vegetation is what differentiates marshes from other types of wetland such as swamps, which are dominated by trees, and mires, which are wetlands that have accumulated deposits of acidic peat. Marshes ...
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Mudflat
Mudflats or mud flats, also known as tidal flats or, in Ireland, slob or slobs, are coastal wetlands that form in intertidal areas where sediments have been deposited by tides or rivers. A global analysis published in 2019 suggested that tidal flat ecosystems are as extensive globally as mangroves, covering at least of the Earth's surface. / They are found in sheltered areas such as bays, bayous, lagoons, and estuaries; they are also seen in freshwater lakes and salty lakes (or inland seas) alike, wherein many rivers and creeks end. Mudflats may be viewed geologically as exposed layers of bay mud, resulting from deposition of estuarine silts, clays and aquatic animal detritus. Most of the sediment within a mudflat is within the intertidal zone, and thus the flat is submerged and exposed approximately twice daily. A recent global remote sensing analysis estimated that approximately 50% of the global extent of tidal flats occurs within eight countries (Indonesia, China, Au ...
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Estuary
An estuary is a partially enclosed coastal body of brackish water with one or more rivers or streams flowing into it, and with a free connection to the open sea. Estuaries form a transition zone between river environments and maritime environments and are an example of an ecotone. Estuaries are subject both to marine influences such as tides, waves, and the influx of saline water, and to fluvial influences such as flows of freshwater and sediment. The mixing of seawater and freshwater provides high levels of nutrients both in the water column and in sediment, making estuaries among the most productive natural habitats in the world. Most existing estuaries formed during the Holocene epoch with the flooding of river-eroded or glacially scoured valleys when the sea level began to rise about 10,000–12,000 years ago. Estuaries are typically classified according to their geomorphological features or to water-circulation patterns. They can have many different names, such as ba ...
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Plankton
Plankton are the diverse collection of organisms that drift in Hydrosphere, water (or atmosphere, air) but are unable to actively propel themselves against ocean current, currents (or wind). The individual organisms constituting plankton are called plankters. In the ocean, they provide a crucial source of food to many small and large aquatic organisms, such as bivalves, fish, and baleen whales. Marine plankton include bacteria, archaea, algae, protozoa, microscopic fungi, and drifting or floating animals that inhabit the saltwater of oceans and the brackish waters of estuaries. fresh water, Freshwater plankton are similar to marine plankton, but are found in lakes and rivers. Mostly, plankton just drift where currents take them, though some, like jellyfish, swim slowly but not fast enough to generally overcome the influence of currents. Although plankton are usually thought of as inhabiting water, there are also airborne versions that live part of their lives drifting in the at ...
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Photosynthetic Pigment
A photosynthetic pigment (accessory pigment; chloroplast pigment; antenna pigment) is a pigment that is present in chloroplasts or photosynthetic bacteria and captures the light energy necessary for photosynthesis. List of photosynthetic pigments (in order of increasing polarity): *Carotene: an orange pigment * Xanthophyll: a yellow pigment * Phaeophytin ''a'': + energy n the other side of the m ... when exposed to light. References {{reflist ...
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Red Algae
Red algae, or Rhodophyta (, ; ), make up one of the oldest groups of eukaryotic algae. The Rhodophyta comprises one of the largest Phylum, phyla of algae, containing over 7,000 recognized species within over 900 Genus, genera amidst ongoing taxonomic revisions. The majority of species (6,793) are Florideophyceae, and mostly consist of multicellular, ocean, marine algae, including many notable seaweeds. Red algae are abundant in marine habitats. Approximately 5% of red algae species occur in freshwater environments, with greater concentrations in warmer areas. Except for two coastal cave dwelling species in the asexual class Cyanidiophyceae, no terrestrial species exist, which may be due to an evolutionary bottleneck in which the last common ancestor lost about 25% of its core genes and much of its evolutionary plasticity. Red algae form a distinct group characterized by eukaryotic cells without flagella and centrioles, chloroplasts without external endoplasmic reticulum or unstack ...
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Genome
A genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as regulatory sequences (see non-coding DNA), and often a substantial fraction of junk DNA with no evident function. Almost all eukaryotes have mitochondrial DNA, mitochondria and a small mitochondrial genome. Algae and plants also contain chloroplast DNA, chloroplasts with a chloroplast genome. The study of the genome is called genomics. The genomes of many organisms have been Whole-genome sequencing, sequenced and various regions have been annotated. The first genome to be sequenced was that of the virus φX174 in 1977; the first genome sequence of a prokaryote (''Haemophilus influenzae'') was published in 1995; the yeast (''Saccharomyces cerevisiae'') genome was the first eukaryotic genome to be sequenced in 1996. The Human Genome Project ...
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