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Bacillus Clarkii
''Bacillus clarkii'' is a facultative anaerobe bacterium. It is a gram positive, alkaliphile, alkaliphilic and alkalitolerant, aerobic endospore-forming bacteria. This species has been recently transferred into the genus ''Evansella.'' The correct nomenclature is ''Evansella clarkii.'' References Further reading External linksUniProt entryType strain of ''Bacillus clarkii'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
Bacillus, clarkii Bacteria described in 1995 {{bacilli-stub ...
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Facultative Anaerobe
A facultative anaerobic organism is an organism that makes ATP by aerobic respiration if oxygen is present, but is capable of switching to fermentation if oxygen is absent. Some examples of facultatively anaerobic bacteria are ''Staphylococcus'' spp., ''Escherichia coli'', ''Salmonella'', ''Listeria'' spp., '' Shewanella oneidensis'' and ''Yersinia pestis''. Certain eukaryotes are also facultative anaerobes, including pupfish, fungi such as ''Saccharomyces cerevisiae'' and many aquatic invertebrates such as nereid polychaetes. It has been observed that in mutants of '' Salmonella typhimurium'' that underwent mutations to be either obligate aerobes or anaerobes, there were varying levels of chromatin-remodeling proteins. The obligate aerobes were later found to have a defective DNA gyrase subunit A gene ('' gyrA''), while obligate anaerobes were defective in topoisomerase I (''topI''). This indicates that topoisomerase I and its associated relaxation of chromosomal DNA is requi ...
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Gram Positive
In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. The Gram stain is used by microbiologists to place bacteria into two main categories, gram-positive (+) and gram-negative (−). Gram-positive bacteria have a thick layer of peptidoglycan within the cell wall, and gram-negative bacteria have a thin layer of peptidoglycan. Gram-positive bacteria retain the crystal violet stain used in the test, resulting in a purple color when observed through an optical microscope. The thick layer of peptidoglycan in the bacterial cell wall retains the stain after it has been fixed in place by iodine. During the decolorization step, the decolorizer removes crystal violet from all other cells. Conversely, gram-negative bacteria cannot retain the violet stain after the decolorization step; alcohol used in this stage deg ...
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Alkaliphile
Alkaliphiles are a class of extremophilic microbes capable of survival in alkaline ( pH roughly 8.5–11) environments, growing optimally around a pH of 10. These bacteria can be further categorized as obligate alkaliphiles (those that require high pH to survive), facultative alkaliphiles (those able to survive in high pH, but also grow under normal conditions) and haloalkaliphiles (those that require high salt content to survive).Horikoshi, Koki. "Alkaliphiles: Some applications of their products for biotechnology." Microbiology and Molecular Biology Reviews 63.4 (1999): 735-50. Print. Background information Microbial growth in alkaline conditions presents several complications to normal biochemical activity and reproduction, as high pH is detrimental to normal cellular processes. For example, alkalinity can lead to denaturation of DNA, instability of the plasma membrane and inactivation of cytosolic enzymes, as well as other unfavorable physiological changes.Higashibata, Akira, ...
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Evansella
''Evansella'' is a genus of Gram-positive bacteria, Gram-positive rod-shaped bacteria in the family ''Bacillaceae'' within the order ''Bacillales''. The type species for this genus is ''Evansella cellulosilytica.'' Members of ''Evansella'' was transferred from the genus ''Bacillus'', a genus that has long been under close scrutiny by the scientific community due to its inclusion of many phylogenetically unrelated species. The original criteria used to assign species into ''Bacillus'' were vague and applied to many different species of bacteria, resulting in a large genus full of unrelated organisms with a diverse range of biochemical characteristics. To clarify the taxonomic relationships within the genus, multiple phylogenetic studies have been conducted, resulting in the transfer of many species into novel genera such as ''Virgibacillus, Solibacillus, Brevibacillus'' and ''Ectobacillus.'' Additionally, ''Bacillus'' has been restricted only include species closely related to ''Ba ...
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Bacillus
''Bacillus'', from Latin "bacillus", meaning "little staff, wand", is a genus of Gram-positive, rod-shaped bacteria, a member of the phylum ''Bacillota'', with 266 named species. The term is also used to describe the shape (rod) of other so-shaped bacteria; and the plural ''Bacilli'' is the name of the class of bacteria to which this genus belongs. ''Bacillus'' species can be either obligate aerobes which are dependent on oxygen, or facultative anaerobes which can survive in the absence of oxygen. Cultured ''Bacillus'' species test positive for the enzyme catalase if oxygen has been used or is present. ''Bacillus'' can reduce themselves to oval endospores and can remain in this dormant state for years. The endospore of one species from Morocco is reported to have survived being heated to 420 °C. Endospore formation is usually triggered by a lack of nutrients: the bacterium divides within its cell wall, and one side then engulfs the other. They are not true spores (i.e. ...
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