Bacillus pumilus
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''Bacillus pumilus'' is a
Gram-positive In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. Gram-positive bact ...
,
aerobic Aerobic means "requiring air," in which "air" usually means oxygen. Aerobic may also refer to * Aerobic exercise, prolonged exercise of moderate intensity * Aerobics, a form of aerobic exercise * Aerobic respiration, the aerobic process of cel ...
, spore-forming
bacillus ''Bacillus'' (Latin "stick") is a genus of Gram-positive, rod-shaped bacteria, a member of the phylum '' Bacillota'', with 266 named species. The term is also used to describe the shape (rod) of other so-shaped bacteria; and the plural ''Bacill ...
commonly found in soil. ''Bacillus pumilus'' spores—with the exception of mutant strain ATCC 7061—generally show high resistance to
environmental stresses Stress, either physiological, biological or psychological, is an organism's response to a stressor such as an environmental condition. Stress is the body's method of reacting to a condition such as a threat, challenge or physical and psycholog ...
, including UV light exposure, desiccation, and the presence of
oxidizer An oxidizing agent (also known as an oxidant, oxidizer, electron recipient, or electron acceptor) is a substance in a redox chemical reaction that gains or " accepts"/"receives" an electron from a (called the , , or ). In other words, an oxid ...
s such as hydrogen peroxide. Strains of ''B. pumilus'' found at the
NASA The National Aeronautics and Space Administration (NASA ) is an independent agencies of the United States government, independent agency of the US federal government responsible for the civil List of government space agencies, space program ...
Jet Propulsion Laboratory The Jet Propulsion Laboratory (JPL) is a federally funded research and development center and NASA field center in the City of La Cañada Flintridge, California, United States. Founded in the 1930s by Caltech researchers, JPL is owned by NASA an ...
were found to be particularly resistant to
hydrogen peroxide Hydrogen peroxide is a chemical compound with the formula . In its pure form, it is a very pale blue liquid that is slightly more viscous than water. It is used as an oxidizer, bleaching agent, and antiseptic, usually as a dilute solution (3%â ...
. A strain of ''B. pumilus'' isolated from black tiger shrimp (''
Penaeus monodon ''Penaeus monodon'', commonly known as the giant tiger prawn, Asian tiger shrimp, black tiger shrimp, and other names, is a marine crustacean that is widely reared for food. Taxonomy ''Penaeus monodon'' was first described by Johan Christian ...
'') was found to have high salt tolerance and to inhibit the growth of marine pathogens, including ''
Vibrio alginolyticus ''Vibrio alginolyticus'' is a Gram-negative marine bacterium. It is medically important since it causes otitis and wound infection. It is also present in the bodies of animals such as pufferfish, where it is responsible for the production of ...
'', when cultured together.


Genome and cell structure

''Bacillus pumilus'' contains one circular chromosome including about 4000 genes and 3600-3900 proteins with varying length in the range of 3.7 to 3.8 Mbp. 41% of the DNA base pairs in ''B. pumilus'' are G-C. The cellular structure of ''B. pumilus'' is similar to other ''Bacillus'' species such as ''B. subtilis'', ''B. megaterium'', and ''B. cereus'', the outer layer of the peptidoglycan cross-links in ''B. pumilus'' is covered by teichoic and lipoteichoic acids same as the most other Gram positive bacteria. These acids contain polyglycosyl phosphates with mono- and disaccharides as their monomers that can play a role in adhesion to different surfaces like the host cells. On the other hand, these phosphate groups on the surface of ''B. pumilus'' can provide net negative charge on the cell surface that allowing to capture some essential cations such as Ca2+ and Mg2+ that are necessary for cell life.


Industrial use

''Bacillus pumilus'' strain GB34 is used as an active ingredient in agricultural fungicides. Growth of the bacterium on plant roots prevents ''
Rhizoctonia ''Rhizoctonia'' is a genus of fungi in the order Cantharellales. Species form thin, effused, corticioid basidiocarps (fruit bodies), but are most frequently found in their sterile, anamorphic state. ''Rhizoctonia'' species are saprotrophic, bu ...
'' and ''
Fusarium ''Fusarium'' is a large genus of filamentous fungi, part of a group often referred to as hyphomycetes, widely distributed in soil and associated with plants. Most species are harmless saprobes, and are relatively abundant members of the soil mi ...
'' spores from germinating. ''Bacillus pumilus'' (ATCC 27142) may be utilized (as a biological indicator or 'BI' for short) to monitor Gamma, Electron Beam (E-beam), or X-ray radiation sterilization processes. However, the relevance of this practice has dwindled rapidly in the last 30 years due to the discovery of wild-type organisms, like ''
Deinococcus radiodurans ''Deinococcus radiodurans'' is an extremophilic bacterium and one of the most radiation-resistant organisms known. It can survive cold, dehydration, vacuum, and acid, and therefore is known as a polyextremophile. It has been listed as the world' ...
'', that have proven to have higher D-values and have unseated ''B. pumilus'' as recognized worst-case radiation challenge organism. As such, the International Standards Organization (ISO) no longer recognizes ''B. pumilus'' as a BI method of validation or routine monitoring of a terminal radiation sterilization process for medical devices labeled as 'sterile'. Instead, parametric means are recognized, using dosimetry to monitor delivered radiation dose. The dose is established using information about the number and types of viable microbes in/on the product and/or its sterile barrier system packaging. The industry term for these microbes as they relate to a sterile medical device is '' bioburden''. Bioburden information coupled with dosimetry and subsequent tests of sterility are collectively used to perform verification dose experiments, which validate the terminal radiation sterilization dose. This dose supports the sterility assurance level (SAL) claim made by the product and its manufacturer. Most medical devices possess an SAL claim of 10E-6, that is one-in-one-million probability of t leastone microbe making it through the sterilization process. The unit of measure for radiation dose for this purpose is kilogray, and a common radiation sterilization dose is 25 kilogray (kGy); however less or more dose is also quite common, as backed by validation data.


See also

*'' Bacillus marinus'' *'' Bacillus lentimorbus'' *'' Bacillus oleronius''


References


Further reading


External links


Type strain of ''Bacillus pumilus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Taxonbar, from=Q4838979 pumilus Fungicides Extremophiles