Difflugidae
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Difflugidae
''Difflugia'' is the largest genus of Arcellinida, one of several groups of Tubulinea within the eukaryote supergroup Amoebozoa. Arcellinida species produce shells or tests from mineral particles or biogeonic elements (e.g. diatom frustules) and are thus commonly referred to as testate amoebae or shelled amoebae. ''Difflugia'' are particularly common in marshes and other freshwater habitats. History The genus ''Difflugia'' was initially discovered in 1815 by L, Leclerc, but its infra-generic classification as a group is still unclear. The genus ''Difflugia'' is the oldest and most diverse of the testate amoebae. It contains more than 300 species and countless subspecies since even minor differences in morphology result in classification as a new species. In 1958, Gauthier-Lièvre and Thomas divided the genus into 10 groups depending on difference in shell morphology. These 10 groups are based on a survey conducted of the African species of ''Difflugia'' The 10 shell shape class ...
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Arcellinida
Arcellinid testate amoebae or Arcellinida,http://www.microscopy-uk.org.uk/mag/artjun03/gsamoebae.html Testate amoebae, peat bogs and past climates. accessed 16 march 2007 Arcellacean or lobose testate amoebae are single-celled protists partially enclosed in a simple test (shell). Arcellinid testate amoebae are commonly found in soils, leaf litter, peat bogs and near/in fresh water. They use their pseudopodia, a temporary cell extension, for moving and taking in food. Like most amoebae, they are generally believed to reproduce asexually via binary fission. However a recent review suggests that sexual recombination may be the rule rather than the exception in amoeboid protists in general, including the Arcellinid testate amoebae. Test or shell Simple tests are made by secretion (autogenous tests), agglutination of foreign material (xenogenous tests), or sometimes a combination of both. Past environmental changes can be determined by analysing the composition of fossil tests, includ ...
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Tubulinea
The Tubulinea are a major grouping of Amoebozoa, including most of the more familiar amoebae genera like ''Amoeba'', '' Arcella'', ''Difflugia'' and '' Hartmannella''. Characteristics During locomotion most Tubulinea have a roughly cylindrical form or produce numerous cylindrical pseudopods. Each cylinder advances by a single central stream of cytoplasm, granular in appearance, and has no subpseudopodia. This distinguishes them from other amoeboid groups, although in some members this is not the normal type of locomotion. Classification This class was anticipated by some biologists like Jahn, who grouped all amoebae with granular pseudopodia together, but most split the lobose amoebae into testate Testacealobosia and naked Gymnamoebia. These latter are polyphyletic, but molecular trees by Bolivar ''et al.'' identified a core monophyletic subgroup. Subsequent studies showed the testate lobose amoebae belong to the same group, which was thus renamed Lobosea ''sensu stricto'' or ...
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Amoebozoa
Amoebozoa is a major taxonomic group containing about 2,400 described species of amoeboid protists, often possessing blunt, fingerlike, lobose pseudopods and tubular mitochondrial cristae. In traditional and currently no longer supported classification schemes, Amoebozoa is ranked as a phylum within either the kingdom Protista or the kingdom Protozoa. In the classification favored by the International Society of Protistologists, it is retained as an unranked " supergroup" within Eukaryota. Molecular genetic analysis supports Amoebozoa as a monophyletic clade. Modern studies of eukaryotic phylogenetic trees identify it as the sister group to Opisthokonta, another major clade which contains both fungi and animals as well as several other clades comprising some 300 species of unicellular eukaryotes. Amoebozoa and Opisthokonta are sometimes grouped together in a high-level taxon, variously named Unikonta, Amorphea or Opimoda. Amoebozoa includes many of the best-known ...
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Test (biology)
In biology, a test is the hard shell of some spherical marine animals and protists, notably sea urchins and microorganisms such as testate foraminiferans, radiolarians, and testate amoebae. The term is also applied to the covering of scale insects. The related Latin term testa is used for the hard seed coat of plant seeds. Etymology The anatomical term "test" derives from the Latin ''testa'' (which means a rounded bowl, amphora or bottle). Structure The test is a skeletal structure, made of hard material such as calcium carbonate, silica, chitin or composite materials. As such, it allows the protection of the internal organs and the attachment of soft flesh. In sea urchins The test of sea urchins is made of calcium carbonate, strengthened by a framework of calcite monocrystals, in a characteristic "stereomic" structure. These two ingredients provide sea urchins with a great solidity and a moderate weight, as well as the capacity to regenerate the mesh from the cuti ...
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Frustules
A frustule is the hard and porous cell wall or external layer of diatoms. The frustule is composed almost purely of silica, made from silicic acid, and is coated with a layer of organic substance, which was referred to in the early literature on diatoms as pectin, a fiber most commonly found in cell walls of plants. This layer is actually composed of several types of polysaccharides.Progress in Phycological Research: v. 7 (1991) by F.E. Round (Volume editor), David J. Chapman (Volume editor) The frustule's structure is usually composed of two overlapping sections known as thecae (or less formally as valves). The joint between the two thecae is supported by bands of silica (girdle bands) that hold them together. This overlapping allows for some internal expansion room and is essential during the reproduction process. The frustule also contains many pores called areolae and slits that provide the diatom access to the external environment for processes such as waste removal and m ...
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Testate Amoebae
Testate amoebae (formerly thecamoebians, Testacea or Thecamoeba) are a polyphyletic group of unicellular amoeboid protists, which differ from naked amoebae in the presence of a test that partially encloses the cell, with an aperture from which the pseudopodia emerge, that provides the amoeba with shelter from predators and environmental conditions. The test of some species is produced entirely by the amoeba and may be organic, siliceous or calcareous depending on the species (autogenic tests), whereas in other cases the test is made up of particles of sediment collected by the amoeba which are then agglutinated together by secretions from within the cell (xenogenic tests). A few taxa (Hyalosphenidae) can build either type, depending on the circumstances and availability of foreign material. The assemblage referred to as "testate amoebae" is actually composed of several, unrelated groups of organisms. However, some features they all share that have been used to group them together ...
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Phylogenetics
In biology, phylogenetics (; from Greek φυλή/ φῦλον [] "tribe, clan, race", and wikt:γενετικός, γενετικός [] "origin, source, birth") is the study of the evolutionary history and relationships among or within groups of organisms. These relationships are determined by Computational phylogenetics, phylogenetic inference methods that focus on observed heritable traits, such as DNA sequences, protein amino acid sequences, or morphology. The result of such an analysis is a phylogenetic tree—a diagram containing a hypothesis of relationships that reflects the evolutionary history of a group of organisms. The tips of a phylogenetic tree can be living taxa or fossils, and represent the "end" or the present time in an evolutionary lineage. A phylogenetic diagram can be rooted or unrooted. A rooted tree diagram indicates the hypothetical common ancestor of the tree. An unrooted tree diagram (a network) makes no assumption about the ancestral line, and do ...
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Monophyly
In cladistics for a group of organisms, monophyly is the condition of being a clade—that is, a group of taxa composed only of a common ancestor (or more precisely an ancestral population) and all of its lineal descendants. Monophyletic groups are typically characterised by shared derived characteristics ( synapomorphies), which distinguish organisms in the clade from other organisms. An equivalent term is holophyly. The word "mono-phyly" means "one-tribe" in Greek. Monophyly is contrasted with paraphyly and polyphyly as shown in the second diagram. A ''paraphyletic group'' consists of all of the descendants of a common ancestor minus one or more monophyletic groups. A '' polyphyletic group'' is characterized by convergent features or habits of scientific interest (for example, night-active primates, fruit trees, aquatic insects). The features by which a polyphyletic group is differentiated from others are not inherited from a common ancestor. These definitions have tak ...
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Netzelia
Arcellinid testate amoebae or Arcellinida,http://www.microscopy-uk.org.uk/mag/artjun03/gsamoebae.html Testate amoebae, peat bogs and past climates. accessed 16 march 2007 Arcellacean or lobose testate amoebae are single-celled protists partially enclosed in a simple test (shell). Arcellinid testate amoebae are commonly found in soils, leaf litter, peat bogs and near/in fresh water. They use their pseudopodia, a temporary cell extension, for moving and taking in food. Like most amoebae, they are generally believed to reproduce asexually via binary fission. However a recent review suggests that sexual recombination may be the rule rather than the exception in amoeboid protists in general, including the Arcellinid testate amoebae. Test or shell Simple tests are made by secretion (autogenous tests), agglutination of foreign material (xenogenous tests), or sometimes a combination of both. Past environmental changes can be determined by analysing the composition of fossil tests, inc ...
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Difflugia Scalpellum
''Difflugia'' is the largest genus of Arcellinida, one of several groups of Tubulinea within the eukaryote supergroup Amoebozoa. Arcellinida species produce shells or Test (biology), tests from mineral particles or biogeonic elements (e.g. diatom frustules) and are thus commonly referred to as testate amoebae or shelled amoebae. ''Difflugia'' are particularly common in marshes and other freshwater habitats. History The genus ''Difflugia'' was initially discovered in 1815 by L, Leclerc, but its infra-generic classification as a group is still unclear. The genus ''Difflugia'' is the oldest and most diverse of the testate amoebae. It contains more than 300 species and countless subspecies since even minor differences in morphology result in classification as a new species. In 1958, Gauthier-Lièvre and Thomas divided the genus into 10 groups depending on difference in shell morphology. These 10 groups are based on a survey conducted of the African species of ''Difflugia'' The 10 she ...
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Difflugia Pyriformis
''Difflugia'' is the largest genus of Arcellinida, one of several groups of Tubulinea within the eukaryote supergroup Amoebozoa. Arcellinida species produce shells or tests from mineral particles or biogeonic elements (e.g. diatom frustules) and are thus commonly referred to as testate amoebae or shelled amoebae. ''Difflugia'' are particularly common in marshes and other freshwater habitats. History The genus ''Difflugia'' was initially discovered in 1815 by L, Leclerc, but its infra-generic classification as a group is still unclear. The genus ''Difflugia'' is the oldest and most diverse of the testate amoebae. It contains more than 300 species and countless subspecies since even minor differences in morphology result in classification as a new species. In 1958, Gauthier-Lièvre and Thomas divided the genus into 10 groups depending on difference in shell morphology. These 10 groups are based on a survey conducted of the African species of ''Difflugia'' The 10 shell shape class ...
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