eTBLAST
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eTBLAST was a free text-similarity service now defunct. It was initially developed by Alexander Pertsemlidis and Harold “Skip” Garner in 2005 at The
University of Texas Southwestern Medical Center The University of Texas Southwestern Medical Center (UT Southwestern or UTSW) is a public academic health science center in Dallas, Texas. With approximately 18,800 employees, more than 2,900 full-time faculty, and nearly 4 million outpatient vi ...
. It offered access to the following databases: *
MEDLINE MEDLINE (Medical Literature Analysis and Retrieval System Online, or MEDLARS Online) is a bibliographic database of life sciences and biomedical information. It includes bibliographic information for articles from academic journals covering medic ...
*
National Institutes of Health The National Institutes of Health, commonly referred to as NIH (with each letter pronounced individually), is the primary agency of the United States government responsible for biomedical and public health research. It was founded in the late ...
(NIH) * CRISP *
Institute of Physics The Institute of Physics (IOP) is a UK-based learned society and professional body that works to advance physics education, research and application. It was founded in 1874 and has a worldwide membership of over 20,000. The IOP is the Physica ...
(IOP) *
Wikipedia Wikipedia is a multilingual free online encyclopedia written and maintained by a community of volunteers, known as Wikipedians, through open collaboration and using a wiki-based editing system. Wikipedia is the largest and most-read refer ...
*
arXiv arXiv (pronounced "archive"—the X represents the Greek letter chi ⟨χ⟩) is an open-access repository of electronic preprints and postprints (known as e-prints) approved for posting after moderation, but not peer review. It consists of ...
*
NASA The National Aeronautics and Space Administration (NASA ) is an independent agency of the US federal government responsible for the civil space program, aeronautics research, and space research. NASA was established in 1958, succeeding t ...
technical reports *
Virginia Tech Virginia Tech (formally the Virginia Polytechnic Institute and State University and informally VT, or VPI) is a Public university, public Land-grant college, land-grant research university with its main campus in Blacksburg, Virginia. It also ...
class descriptions * others of clinical interest eTBLAST searched citation databases and databases containing full-text such as
PUBMED PubMed is a free search engine accessing primarily the MEDLINE database of references and abstracts on life sciences and biomedical topics. The United States National Library of Medicine (NLM) at the National Institutes of Health maintain the ...
. It compared a user’s natural-text query with target databases utilizing a hybrid-search algorithm. The algorithm consisted of a low-sensitivity, weighted, keyword-based first pass followed by a novel second pass based on sentence alignment. eTBLAST later became a web-based service of The Innovation Laboratory at the
Virginia Bioinformatics Institute The Biocomplexity Institute of Virginia Tech (formerly the Virginia Bioinformatics Institute) is a research organization specializing in bioinformatics, computational biology, and systems biology. The institute has more than 250 personnel, inclu ...
. The text-similarity engine studied duplicate publications and potential plagiarism in biomedical literature. eTBLAST received thousands of random samples of Medline abstracts for a large-scale study. Those with the highest similarity were assessed then entered into an on-line database. The work revealed several trends including an increasing rate of duplication in the biomedical literature, according to prominent scientific journals ''
Bioinformatics Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combi ...
'','' Anaesthesia and Intensive Care'', ''
Clinical Chemistry Clinical chemistry (also known as chemical pathology, clinical biochemistry or medical biochemistry) is the area of chemistry that is generally concerned with analysis of bodily fluids for diagnostic and therapeutic purposes. It is an applied ...
'', ''
Urologic oncology Urology (from Greek οὖρον ''ouron'' "urine" and ''-logia'' "study of"), also known as genitourinary surgery, is the branch of medicine that focuses on surgical and medical diseases of the urinary-tract system and the reproductive orga ...
'', ''
Nature Nature, in the broadest sense, is the physics, physical world or universe. "Nature" can refer to the phenomenon, phenomena of the physical world, and also to life in general. The study of nature is a large, if not the only, part of science. ...
'', and ''
Science Science is a systematic endeavor that builds and organizes knowledge in the form of testable explanations and predictions about the universe. Science may be as old as the human species, and some of the earliest archeological evidence for ...
''.


See also

*
BLAST Blast or The Blast may refer to: * Explosion, a rapid increase in volume and release of energy in an extreme manner *Detonation, an exothermic front accelerating through a medium that eventually drives a shock front Film * ''Blast'' (1997 film) ...
(Basic Local Alignment Search Tool) *
Natural language processing Natural language processing (NLP) is an interdisciplinary subfield of linguistics, computer science, and artificial intelligence concerned with the interactions between computers and human language, in particular how to program computers to pro ...
*
Medical literature retrieval Medical literature retrieval or medical document retrieval is an activity that uses professional methods for medical research papers retrieval, report and other data to improve medicine research and practice. Medical search engine Professional med ...


References


External links

* {{DEFAULTSORT:Etblast Virginia Tech Bioinformatics software National Institutes of Health Medical search engines Natural language processing Bibliographic databases and indexes Plagiarism detectors