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''Phytophthora palmivora'' is an
oomycete Oomycota forms a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms, called oomycetes (). They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction of an oospore is the resul ...
that causes bud-rot of palms,
fruit-rot Fruit rot disease may refer to: * Phomopsis leaf caused in grapes by ''Phomopsis viticola''; * Kole-roga caused in coconut and betel nut by ''Phytophthora palmivora''; * Botrytis bunch rot caused by ''Botrytis cinerea'' primarily in grapes; * Blac ...
or kole-roga of
coconut The coconut tree (''Cocos nucifera'') is a member of the palm tree family (Arecaceae) and the only living species of the genus ''Cocos''. The term "coconut" (or the archaic "cocoanut") can refer to the whole coconut palm, the seed, or ...
and
areca nut ''Areca'' is a genus of 51 species of palms in the family Arecaceae, found in humid tropical forests from the islands of the Philippines, Malaysia and India, across Southeast Asia to Melanesia. The generic name ''Areca'' is derived from a name ...
. These are among the most serious diseases caused by
fungi A fungus (plural, : fungi or funguses) is any member of the group of Eukaryote, eukaryotic organisms that includes microorganisms such as yeasts and Mold (fungus), molds, as well as the more familiar mushrooms. These organisms are classified ...
and
mould A mold () or mould () is one of the structures certain fungi can form. The dust-like, colored appearance of molds is due to the formation of spores containing fungal secondary metabolites. The spores are the dispersal units of the fungi. No ...
s in
South India South India, also known as Dakshina Bharata or Peninsular India, consists of the peninsular southern part of India. It encompasses the States and union territories of India, Indian states of Andhra Pradesh, Karnataka, Kerala, Tamil Nadu, and T ...
. It occurs almost every year in
Malnad Malnad (; Malēnādu) is a region in the state of Karnataka in India. Malenadu covers the western and eastern slopes of the Western Ghats or Sahyadri mountain range, and is roughly 100 kilometers in width. Malnadis a region of Karnataka ...
,
Mysore Mysore (), officially Mysuru (), is a city in the southern part of the state of Karnataka, India. Mysore city is geographically located between 12° 18′ 26″ north latitude and 76° 38′ 59″ east longitude. It is located at an altitude of ...
, North & South Kanara, Malabar and other areas. Similar diseases of palms are also known to occur in
Sri Lanka Sri Lanka (, ; si, ශ්‍රී ලංකා, Śrī Laṅkā, translit-std=ISO (); ta, இலங்கை, Ilaṅkai, translit-std=ISO ()), formerly known as Ceylon and officially the Democratic Socialist Republic of Sri Lanka, is an ...
,
Mauritius Mauritius ( ; french: Maurice, link=no ; mfe, label=Mauritian Creole, Moris ), officially the Republic of Mauritius, is an island nation in the Indian Ocean about off the southeast coast of the African continent, east of Madagascar. It incl ...
, and Sumatra. The causative organism was first identified as ''Phytophthora palmivora'' by Edwin John Butler in 1917.Tucker, C.M. (1931) ''Taxonomy of the genus ''Phytophtora'' de Bary'' University of Missouri Agricultural Experiment Station Research Bulletin 153;


Biology

''Phytophthora palmivora'' produces abundant
sporangia A sporangium (; from Late Latin, ) is an enclosure in which spores are formed. It can be composed of a single cell or can be multicellular. Virtually all plants, fungi, and many other lineages form sporangia at some point in their life cyc ...
on V-8
agar Agar ( or ), or agar-agar, is a jelly-like substance consisting of polysaccharides obtained from the cell walls of some species of red algae, primarily from ogonori ('' Gracilaria'') and "tengusa" ('' Gelidiaceae''). As found in nature, agar ...
under continuous
fluorescent light A fluorescent lamp, or fluorescent tube, is a low-pressure mercury-vapor gas-discharge lamp that uses fluorescence to produce visible light. An electric current in the gas excites mercury vapor, which produces short-wave ultraviolet lig ...
. However, light is not required for sporangia production on infected
papaya The papaya (, ), papaw, () or pawpaw () is the plant species ''Carica papaya'', one of the 21 accepted species in the genus '' Carica'' of the family Caricaceae. It was first domesticated in Mesoamerica, within modern-day southern Mexico and ...
fruit. Sporangia are usually produced in clusters
sympodially Sympodial growth is a bifurcating branching pattern where one branch develops more strongly than the other, resulting in the stronger branches forming the primary shoot and the weaker branches appearing laterally. A sympodium, also referred to a ...
. Sporangia are papillate and ovoid with the widest part close to the base. They are easily washed off and each detached sporangium contains a short pedicel. The average size of the sporangia is 50×33 µm with a length of about 1.6 times longer than it is wide. Sporangia germinate directly in a nutrient medium by producing germ tubes that develop into
mycelia Mycelium (plural mycelia) is a root-like structure of a fungus consisting of a mass of branching, thread-like hyphae. Fungal colonies composed of mycelium are found in and on soil and many other substrates. A typical single spore germinates in ...
l masses. In water, however,
zoospore A zoospore is a motile asexual spore that uses a flagellum for locomotion. Also called a swarm spore, these spores are created by some protists, bacteria, and fungi to propagate themselves. Diversity Flagella types Zoospores may possess one or m ...
s are released from germinating sporangia. Zoospores aggregate and form distinct patterns at 16 °C in water. Chlamydospores produced in infected papaya fruit and pure papaya juice are thick-walled. However, chlamydospores produced in papaya juice at lower concentrations or in other kinds of fruit juice are mostly thin-walled. In the presence of nutrients, chlamydospores germinate by producing germ tubes that continue to grow and form mycelial masses. In water, chlamydospores germinate by producing short germ tubes, each with a sporangium at the tip.
Sexual reproduction Sexual reproduction is a type of reproduction that involves a complex life cycle in which a gamete ( haploid reproductive cells, such as a sperm or egg cell) with a single set of chromosomes combines with another gamete to produce a zygote th ...
in ''Phytophthora palmivora'' requires the presence of opposite
mating type Mating types are the microorganism equivalent to sexes in multicellular lifeforms and are thought to be the ancestor to distinct sexes. They also occur in macro-organisms such as fungi. Definition Mating types are the microorganism equivalent to s ...
s known as A1 and A2. Both A1 and A2 isolates can produce
zoospore A zoospore is a motile asexual spore that uses a flagellum for locomotion. Also called a swarm spore, these spores are created by some protists, bacteria, and fungi to propagate themselves. Diversity Flagella types Zoospores may possess one or m ...
s by selfing when stimulated by
sex hormone Sex hormones, also known as sex steroids, gonadocorticoids and gonadal steroids, are steroid hormones that interact with vertebrate steroid hormone receptors. The sex hormones include the androgens, estrogens, and progestogens. Their effects ...
s produced by A2 and A1, respectively. Light is inhibitory to zoospore formation but stimulatory to zoospore germination. Mature zoospores can be induced to germinate by treatment with 0.25% KMnO4 for 20 min and incubation under light during germination. Although sporangia and zoospores may survive in soil for short periods, chlamydospores are the main survival structure for ''P. palmivora'' in nature. Zoospores are capable of long-term survival but do not play a significant role in the disease cycle because sexual reproduction in ''P. palmivora'' requires the presence of opposite mating types, and the chance for this to occur in nature is very low. During rainy periods, chlamydospores in soil may germinate in water to produce sporangia and release zoospores. The impact of falling rain drops may splash zoospores into air in droplets. The zoospore-containing droplets may be further dispersed by wind and become the
inoculum In biology, inoculum refers to the source material used for inoculation. ''Inoculum'' may refer to: * In medicine, material that is the source of the inoculation in a vaccine * In microbiology, propagules: cells, tissue, or viruses that are used to ...
for infecting fruit and occasionally stems of papaya in the fields. The pathogen produces abundant sporangia on the surface of infected fruit that are further dispersed by wind-blown rain and cause outbreaks of ''Phytophthora'' fruit rot in the same and nearby orchards. Chlamydospores formed in fallen fruit survive in soil and serve as the main source of inoculum for infection of roots of papaya seedling in subsequent plantings. ''Phytophthora'' root rot of papaya seedlings is most serious during rainy periods. Under waterlogged conditions, ''P. palmivora'' may attack roots of papaya older than three-months of age, the time at which they become resistant to the pathogen under normal conditions. Therefore, ''Phytophthora'' root rot may occur on papaya at any age in poorly drained areas. Waterlogged conditions appear to weaken the defense mechanism of papaya roots against invasion by the pathogen. Mobility of zoospores of ''P. palmivora'' under such conditions also may contribute to the severity of the disease due to their attraction by papaya roots. Favorable temperature is also a contributing factor to the severity of ''Phytophthora'' diseases because of its effect on growth and
sporulation In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae ...
of the pathogen. ''Phytophthora palmivora'' has an optimum temperature for growth of 30 °C, a maximum temperature of 36 °C and a minimum temperature of 12 °C. The pathogen produces the most sporangia at 25 °C but no sporangia are produced at temperatures higher than 35 °C or lower than 15 °C.


Hosts and symptoms

Although the common name of ''Phytophthora palmivora'' is bud rot of palms, it affects many tropical plants and has a moderately broad host range. ''P. palmivora'' is well studied in coconuts and papaya trees, however there are multiple hosts that are less commonly studied. One common symptom of ''P. palmivora'' is fruit rots which are found in papaya,
citrus ''Citrus'' is a genus of flowering trees and shrubs in the rue family, Rutaceae. Plants in the genus produce citrus fruits, including important crops such as oranges, lemons, grapefruits, pomelos, and limes. The genus ''Citrus'' is nati ...
, coconuts,
durian The durian (, ) is the edible fruit of several tree species belonging to the genus ''Durio''. There are 30 recognised ''Durio'' species, at least nine of which produce edible fruit. '' Durio zibethinus'', native to Borneo and Sumatra, is the o ...
, and
cacao Cacao is the seed from which cocoa and chocolate are made, from Spanish cacao, an adaptation of Nahuatl cacaua, the root form of cacahuatl ("bean of the cocoa-tree"). It may also refer to: Plants *''Theobroma cacao'', a tropical evergreen tree ** ...
. Root rots are another symptom of ''P. palmivora'' and can be seen in
red maple ''Acer rubrum'', the red maple, also known as swamp maple, water maple, or soft maple, is one of the most common and widespread deciduous trees of eastern and central North America. The U.S. Forest Service recognizes it as the most abundant nati ...
s, citrus, papaya, mango, durian, and
black pepper Black pepper (''Piper nigrum'') is a flowering vine in the family Piperaceae, cultivated for its fruit, known as a peppercorn, which is usually dried and used as a spice and seasoning. The fruit is a drupe (stonefruit) which is about in di ...
. Another symptom is the presence of cankers which are found in red maple, papaya,
rubber Rubber, also called India rubber, latex, Amazonian rubber, ''caucho'', or ''caoutchouc'', as initially produced, consists of polymers of the organic compound isoprene, with minor impurities of other organic compounds. Thailand, Malaysia, a ...
,
mango A mango is an edible stone fruit produced by the tropical tree '' Mangifera indica''. It is believed to have originated in the region between northwestern Myanmar, Bangladesh, and northeastern India. ''M. indica'' has been cultivated in Sout ...
s, and cacao. Bud rots can also be seen in papaya and coconuts infected with ''P. palmivora.'' Bud rots are also found in Palmyra palms and coconut palms. Collar rots are found on citrus, mango, and black pepper infected with ''P. palmivora''. The signs of ''P. palmivora'' are microscopic and can be differentiated from other oomycetes by the presence of oval shaped papillate sporangia with short pedicles and spherical oogonia with narrow stalks (Widmer, 2014).


Epidemiology

Rain and wind are the two major factors in the epidemiology of ''Phytophthora'' fruit rot of papaya. Rain splash is needed for liberation of sporangia of ''P. palmivora'' from the surface of infected fruit into the atmosphere and for projection of the soil inoculum into air. Wind is required for dispersal of the inoculum once it reaches the air. Therefore, wind-blown rain is essential for initiation of the primary infection and the development of epidemics in papaya orchards. ''Phtophthora palmivora'' also cause fruit rot, bud rot, etc.. Bud rot of coconut (''cocos nucifera'')is very common in
India India, officially the Republic of India ( Hindi: ), is a country in South Asia. It is the seventh-largest country by area, the second-most populous country, and the most populous democracy in the world. Bounded by the Indian Ocean on the ...
. Atmospheric temperature of 18-20 °C along with high humidity activates the pathogen


Management


General control

Since ''P. palmivora'' is an
oomycete Oomycota forms a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms, called oomycetes (). They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction of an oospore is the resul ...
the simplest management technique is to control the amount of water present in the soil. Techniques for controlling moisture include: monitored watering,
pruning Pruning is a horticultural, arboricultural, and silvicultural practice involving the selective removal of certain parts of a plant, such as branches, buds, or roots. The practice entails the ''targeted'' removal of diseased, damaged, dead ...
to increase airflow and decrease humidity in the soil, as well as making sure that areas where potential hosts are planted are not prone to flooding, oftentimes this includes planting on an incline. Other means of cultural control for ''P. palmivora'' include mulching to reduce the number of spores released via rain splash, complete removal of infected host plants and materials, and in some cases the use of
companion crop Companion planting in gardening and agriculture is the planting of different crops in proximity for any of a number of different reasons, including pest control, pollination, providing habitat for beneficial insects, maximizing use of space, a ...
s. Companion crops are planted in the same fields as the host plant and are used to divert some of the pathogen away from the hosts, an example being planting
banana A banana is an elongated, edible fruit – botanically a berry (botany), berry – produced by several kinds of large herbaceous flowering plants in the genus ''Musa (genus), Musa''. In some countries, Cooking banana, bananas used for ...
s and
avocado The avocado (''Persea americana'') is a medium-sized, evergreen tree in the laurel family (Lauraceae). It is native to Americas, the Americas and was first domesticated by Mesoamerica, Mesoamerican tribes more than 5,000 years ago. Pre-Columb ...
s in the same field. Chemical control methods for ''P. palmivora'' include: protectant fungicides such as the
Bordeaux mixture Bordeaux mixture (also called ''Bordo Mix'') is a mixture of copper(II) sulphate (CuSO4) and quicklime ( Ca O) used as a fungicide. It is used in vineyards, fruit-farms and gardens to prevent infestations of downy mildew, powdery mildew and other ...
,
phosphonate In organic chemistry, phosphonates or phosphonic acids are organophosphorus compounds containing groups (where R = alkyl, aryl, or just hydrogen). Phosphonic acids, typically handled as salts, are generally nonvolatile solids that are poorl ...
s which control the mycelial growth of the pathogen, dithiocarbamates such as Mancozeb, and phenylamides which control the spread of the pathogen from the roots of the host. Host resistance is also a method of controlling the pathogen, resistant plants generally have thicker cuticles which inhibits the ability of the pathogen to enter the host.


Non-chemical control in papaya

Root rot of papaya seedlings, caused by ''P. palmivora'', in replant fields can be controlled with the virgin soil technique. Virgin soil (soil in which papaya has never been grown in before) is placed in planting holes about 30 cm in diameter and 10 cm deep with a mound about 4 cm high. Roots of papaya plants are protected by the virgin soil during the susceptible stage, and become resistant to the pathogen when they extend to the infested soil. Trees established with the virgin soil method in the replant fields produce fruit as abundantly as those growing in the first planting fields. The virgin soil method has the advantages of being relatively inexpensive, very effective and nonhazardous. Cultural practice is also important in the management of ''Phytophthora'' diseases of papaya. Incidence of ''Phytophthora'' root rot of mature trees in waterlogged areas during the rainy periods can be greatly reduced by improving drainage in the orchards. Infected fruit on the trees and those that have fallen to the ground should be removed to reduce the inoculum for aerial infection of fruit and stems, and infection of seedling roots in subsequent plantings.


Importance

Because ''P. palmivora'' infects multiple hosts that hold an economic significance including cacao, coconut, papaya, mango,
olive tree The olive, botanical name ''Olea europaea'', meaning 'European olive' in Latin, is a species of small tree or shrub in the family Oleaceae, found traditionally in the Mediterranean Basin. When in shrub form, it is known as ''Olea europaea'' ' ...
s, and black pepper, this is a pathogen of great concern. The pathogen is found in various regions of the planet ranging from
Africa Africa is the world's second-largest and second-most populous continent, after Asia in both cases. At about 30.3 million km2 (11.7 million square miles) including adjacent islands, it covers 6% of Earth's total surface area ...
,
India India, officially the Republic of India ( Hindi: ), is a country in South Asia. It is the seventh-largest country by area, the second-most populous country, and the most populous democracy in the world. Bounded by the Indian Ocean on the ...
,
South America South America is a continent entirely in the Western Hemisphere and mostly in the Southern Hemisphere, with a relatively small portion in the Northern Hemisphere at the northern tip of the continent. It can also be described as the souther ...
, and even the temperate regions of North America. It has been estimated that 10-20% of all cacao is lost due to ''Phytophthora'' Pod Rots (PPR) which includes ''P. palmivora''. Due to ''P. palmivora’s'' dependence on moisture, the annual yield loss fluctuates and in some years losses have been as high as 75% in some regions. This impacts the cost of cacao, and thus the pathogen controls the cost and availability of products such as
chocolate Chocolate is a food made from roasted and ground cacao seed kernels that is available as a liquid, solid, or paste, either on its own or as a flavoring agent in other foods. Cacao has been consumed in some form since at least the Olmec civil ...
. In mangoes, the pathogen is known to kill young plants, specifically nursery plants. This impacts the long-term number of commercially available plants which could lead to potentially lower crop yields. In coconuts, the expected yield losses caused by ''P. palmivora'' have been up to 2.5% per month during the rainy season, this can impact coconut product manufacturing such as
coconut oil frameless , right , alt = A cracked coconut and a bottle of coconut oil Coconut oil (or coconut butter) is an edible oil derived from the wick, meat, and milk of the coconut palm fruit. Coconut oil is a white solid fat; in warmer climates duri ...
. In the 1970s ''P. palmivora'' had such a severe impact on black pepper plants in
Brazil Brazil ( pt, Brasil; ), officially the Federative Republic of Brazil (Portuguese: ), is the largest country in both South America and Latin America. At and with over 217 million people, Brazil is the world's fifth-largest country by area ...
that it was no longer commercially grown, and it is considered the most detrimental pathogen of black pepper. As previously stated impacts of ''P. palmivora'' commercially cause it to be a pathogen of significant importance.


References

* Butler. (2008, October). OCT08 Pathogen of the month – October 2008 - APPSnet.org. Retrieved November 15, 2016, from http://www.appsnet.org/Publications/POTM/pdf/Oct08.pdf * Freeman, S. (2007). ''Phytophthora'' diseases. In R. Ploetz (Ed.), The Mango: Botany, Production and Uses (2nd ed., pp. 282–283). Homestead, FL: Center for Tropical Agriculture. * * * * * * McClure, S., & Roth, S. (1995). Companion Planting Made Easy. Emmaus, PA: Rodale Press. * Michel, D., De Franqueville, H., & Ducamp, M. (n.d.). Bud Rot and Other Major Diseases of Coconut, a Potential Threat to Oil Palm. * * * * * Vanegtern, B., Rogers, M., & Nelson, S. (2015, May). Black Pod Rot of Cacao Caused by ''Phytophthora palmivora''. Retrieved November 15, 2016, from http://www.ctahr.hawaii.edu/oc/freepubs/pdf/PD-108.pdf * Widmer, T. (2014). Forest ''Phytophthora''s. Retrieved November 15, 2016, from http://journals.oregondigital.org/index.php/ForestPhytophthora/article/view/3557/3332 * Widmer, T. (2016). ''Phytophthora palmivora''. Retrieved November 15, 2016, from http://forestphytophthoras.org/species/palmivora-0/disease {{Taxonbar, from=Q3492461 palmivora Water mould plant pathogens and diseases Coconut palm diseases Mycoherbicides