Methylerythritol Phosphate Pathway
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The non-mevalonate pathway—also appearing as the mevalonate-independent pathway and the 2-''C''-methyl-D-erythritol 4-phosphate/1-deoxy-D-xylulose 5-phosphate (MEP/DOXP) pathway—is an alternative metabolic pathway for the
biosynthesis Biosynthesis is a multi-step, enzyme-catalyzed process where substrates are converted into more complex products in living organisms. In biosynthesis, simple compounds are modified, converted into other compounds, or joined to form macromolecules. ...
of the isoprenoid precursors isopentenyl pyrophosphate (IPP) and dimethylallyl pyrophosphate (DMAPP). The currently preferred name for this pathway is the MEP pathway, since
MEP MEP may refer to: Organisations and politics * Mahajana Eksath Peramuna, a political party in Sri Lanka * Mahajana Eksath Peramuna (1956), a former political alliance in Sri Lanka * Maison européenne de la photographie, a photography centre ...
is the first committed metabolite on the route to
IPP IPP may refer to: Organisations * Independent Power Producer, electric power generator * India Pride Project, recovering stolen Indian artefacts * Istituto per la Protezione delle Piante (Institute of Plant Protection), Italy * Max-Planck-Insti ...
.


Isoprenoid precursor biosynthesis

The classical mevalonate pathway (MVA pathway or
HMG-CoA reductase HMG-CoA reductase (3-hydroxy-3-methyl-glutaryl-coenzyme A reductase, official symbol HMGCR) is the rate-controlling enzyme (NADH-dependent, ; NADPH-dependent, ) of the mevalonate pathway, the metabolic pathway that produces cholesterol and oth ...
pathway) is a metabolic pathway for the biosynthesis of isoprenoid precursors: IPP and DMAPP. The MVA pathway is present in most eukaryotes and some bacteria. IPP and DMAPP serve as the basis for the biosynthesis of isoprenoid (terpenoid) molecules used in processes as diverse as protein prenylation, cell membrane maintenance, the synthesis of hormones, protein anchoring and ''N''-glycosylation in all three domains of life. Most bacteria, plants, and apicomplexan
protozoa Protozoa (singular: protozoan or protozoon; alternative plural: protozoans) are a group of single-celled eukaryotes, either free-living or parasitic, that feed on organic matter such as other microorganisms or organic tissues and debris. Histo ...
—such as malaria parasites—are able to produce
isoprenoid The terpenoids, also known as isoprenoids, are a class of naturally occurring organic chemicals derived from the 5-carbon compound isoprene and its derivatives called terpenes, diterpenes, etc. While sometimes used interchangeably with "terpenes", ...
precursors using an alternative ''non-mevalonate'' pathway called the MEP pathway''.'' Plants and many photosynthetic protozoa retain both the MVA pathway and the MEP pathway. IPP/DMAPP biosynthesis via the MEP pathway takes place in
plastid The plastid (Greek: πλαστός; plastós: formed, molded – plural plastids) is a membrane-bound organelle found in the Cell (biology), cells of plants, algae, and some other eukaryotic organisms. They are considered to be intracellular endosy ...
organelles, while the biosynthesis via the MVA pathway takes place in the cytoplasm. Bacteria such as '' Escherichia coli'' have been engineered for co-expressing both the MEP and the MVA pathway. Distribution of the metabolic fluxes between the MEP and the MVA pathway can be studied using 13C-glucose isotopomers. Bacteria that use the MEP pathway include important pathogens such ''
Mycobacterium tuberculosis ''Mycobacterium tuberculosis'' (M. tb) is a species of pathogenic bacteria in the family Mycobacteriaceae and the causative agent of tuberculosis. First discovered in 1882 by Robert Koch, ''M. tuberculosis'' has an unusual, waxy coating on its c ...
''.


Reactions

The reactions of the non-mevalonate pathway are as follows, taken primarily from Eisenreich and co-workers, except where the bold labels are additional local abbreviations to assist in connecting the table to the scheme above:


Inhibition and other pathway research

DXP reductoisomerase (also known as: DXR, DOXP reductoisomerase, IspC, MEP synthase), is a key enzyme in the MEP pathway. It can be inhibited by the
natural product A natural product is a natural compound or substance produced by a living organism—that is, found in nature. In the broadest sense, natural products include any substance produced by life. Natural products can also be prepared by chemical syn ...
fosmidomycin Fosmidomycin is an antibiotic that was originally isolated from culture broths of bacteria of the genus '' Streptomyces''. It specifically inhibits DXP reductoisomerase, a key enzyme in the non-mevalonate pathway of isoprenoid biosynthesis. It ...
, which is under study as a starting point to develop a candidate antibacterial or antimalarial drug. The intermediate, HMB-PP, is a natural activator of human Vγ9/Vδ2 T cells, the major γδ T cell population in peripheral blood, and cells that "play a crucial role in the immune response to microbial pathogens". * IspH inhibitors: non-mevalonate Metabolic pathway that is essential for most bacteria but absent in humans, making it an ideal target for antibiotic development. This pathway, called methyl-D-erythritol phosphate (MEP) or non-mevalonate pathway, is responsible for biosynthesis of isoprenoids—molecules required for cell survival in most pathogenic bacteria and hence will be helpful in most usually antibacterial resistant bacteria https://www.mdlinx.com/news/research-team-reports-new-class-of-antibiotics-active-against-a-wide-range-of-bacteria/1MbQ5xCs1oHgMqFGI8bYpj?show_order=4&ipost_environment=m3usainc&iqs=9z2ztpe37hi9sgpl3mtgomt0op2rcjjloh1vsoj0tro


References


Further reading

* RSC review; uses MAP synthase nomenclature. *
IspH inhibitors: non-mevalonate Metabolic pathway that is essential for most bacteria but absent in humans, making it an ideal target for antibiotic development. This pathway, called methyl-D-erythritol phosphate (MEP) or non-mevalonate pathway, is responsible for biosynthesis of isoprenoids—molecules required for cell survival in most pathogenic bacteria
{{Cholesterol metabolism intermediates Metabolic pathways Cell biology