Lichen Anatomy And Physiology
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Lichen anatomy and physiology is very different from the anatomy and physiology of the
fungus A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from t ...
and/or algae and/or cyanobacteria that make up the lichen when growing apart from the lichen, either naturally, or in culture. The fungal partner is called the mycobiont. The photosynthetic partner, algae or cyanobacteria, is called the
photobiont A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.thallus Thallus (plural: thalli), from Latinized Greek (), meaning "a green shoot" or "twig", is the vegetative tissue of some organisms in diverse groups such as algae, fungi, some liverworts, lichens, and the Myxogastria. Many of these organisms ...
. The thallus is different from those of either the fungus or alga growing separately. The
fungus A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from t ...
surrounds the algal cells, often enclosing them within complex fungal tissues unique to lichen associations. In many species the fungus penetrates the algal cell wall, forming penetration pegs or
haustoria In botany and mycology, a haustorium (plural haustoria) is a rootlike structure that grows into or around another structure to absorb water or nutrients. For example, in mistletoe or members of the broomrape family, the structure penetrates th ...
similar to those produced by pathogenic fungi.F.S. Dobson (2000) Lichens, an illustrated guide to the British and Irish species. Richmond Publishing Co. Ltd., Slough, UKR. Honegger (1988) Mycobionts. Chapter 3 in T.H. Nash (ed.) (1996) Lichen Biology. Cambridge University Press. Lichens are capable of surviving extremely low levels of
water Water (chemical formula ) is an Inorganic compound, inorganic, transparent, tasteless, odorless, and Color of water, nearly colorless chemical substance, which is the main constituent of Earth's hydrosphere and the fluids of all known living ...
content (
poikilohydric Poikilohydry is the lack of ability (structural or functional mechanism) to maintain and/or regulate water content to achieve homeostasis In biology, homeostasis ( British also homoeostasis) (/hɒmɪə(ʊ)ˈsteɪsɪs/) is the state of steady i ...
). However, the re-configuration of membranes following a period of dehydration requires several minutes at least. The algal or cyanobacterial cells are photosynthetic, and as in plants they reduce atmospheric
carbon dioxide Carbon dioxide ( chemical formula ) is a chemical compound made up of molecules that each have one carbon atom covalently double bonded to two oxygen atoms. It is found in the gas state at room temperature. In the air, carbon dioxide is trans ...
into organic carbon sugars to feed both symbionts. Both partners gain water and mineral nutrients mainly from the atmosphere, through rain and dust. The fungal partner protects the alga by retaining water, serving as a larger capture area for mineral nutrients and, in some cases, provides minerals obtained from the substrate. If a
cyanobacterium Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blu ...
is present, as a primary partner or another symbiont in addition to green alga as in certain tripartite lichens, they can fix atmospheric nitrogen, complementing the activities of the green alga. Although strains of cyanobacteria found in various
cyanolichen Cyanolichens are lichens that apart from the basic fungal component ("mycobiont"), contain cyanobacteria, otherwise known as blue-green algae, as the photosynthesizing component ("photobiont"). Overall, about a third of lichen photobionts are cyan ...
s are often closely related to one another, they differ from the most closely related free-living strains.Sciencemag.org
/ref> The lichen association is a close symbiosis. It extends the ecological range of both partners but is not always obligatory for their growth and reproduction in natural environments, since many of the algal symbionts can live independently. A prominent example is the alga '' Trentepohlia'' which forms orange-coloured populations on tree trunks and suitable rock faces. Lichen propagules ( diaspores) typically contain cells from both partners, although the fungal components of so-called "fringe species" rely instead on algal cells dispersed by the “core species.” Lichen associations may be examples of mutualism,
commensalism Commensalism is a long-term biological interaction ( symbiosis) in which members of one species gain benefits while those of the other species neither benefit nor are harmed. This is in contrast with mutualism, in which both organisms benefit fr ...
or even parasitism, depending on the species. Cyanobacteria in laboratory settings can grow faster when they are alone rather than when they are part of a lichen. In tests, lichen survived and showed remarkable results on the adaptation capacity of photosynthetic activity within the simulation time of 34 days under Martian conditions in the Mars Simulation Laboratory (MSL) maintained by the
German Aerospace Center The German Aerospace Center (german: Deutsches Zentrum für Luft- und Raumfahrt e.V., abbreviated DLR, literally ''German Center for Air- and Space-flight'') is the national center for aerospace, energy and transportation research of Germany ...
(DLR).


Symbionts

::''"Lichens are fungi that have discovered agriculture"'' - Trevor GowardLICHEN BIOLOGY AND THE ENVIRONMENT, LICHENS OF NORTH AMERICA, Sylvia and Stephen Sharnoff

/ref> Living as a Symbiosis, symbiont in a lichen appears to be a successful way for a fungus to derive essential nutrients, as about 20% of all fungal species have acquired this mode of life. The fungal partner may be an Ascomycete or
Basidiomycete Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Ba ...
.Lichens: Systematics, University of California Museum of Paleontology
/ref> Common algal partners are ''
Trebouxia ''Trebouxia'' is a unicellular green alga.Silverside, A. J. (2009). Retrieved from http://www.bioref.lastdragon.org/Chlorophyta/''Trebouxia''.html It is a photosynthetic organism that can exist in almost all habitats found in polar, tropical, a ...
'', '' Pseudotrebouxia'', or ''
Myrmecia Myrmecia can refer to: * ''Myrmecia'' (alga), genus of algae associated with lichens * ''Myrmecia'' (ant), genus of ants called bulldog ants * Myrmecia (skin), a kind of deep wart on the human hands or feet See also * '' Copromorpha myrmecias'' ...
''. Common
cyanobacterium Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blu ...
partners include are ''
Nostoc ''Nostoc'', also known as star jelly, troll’s butter, spit of moon, fallen star, witch's butter (not to be confused with the fungi commonly known as witches' butter), and witch’s jelly, is the most common genus of cyanobacteria found in var ...
'' or ''
Scytonema ''Scytonema'' is a genus of photosynthetic cyanobacteria that contains over 100 species. It grows in filaments that form dark mats. Many species are aquatic and are either free-floating or grow attached to a submerged substrate, while others s ...
''. The largest number of lichenized fungi occur in the Ascomycota, with about 40% of species forming such an association.Kirk ''et al''., pp. 378–81. Some of these lichenized fungi occur in orders with nonlichenized fungi that live as
saprotroph Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi ( ...
s or plant parasites (for example, the Leotiales,
Dothideales Dothideales are an order of bitunicate fungi consisting mainly of saprobic or plant parasitic species. Description Taxa in this order are characterized by the absence of a hamathecium (defined as hyphae or other tissues between asci) in a l ...
, and Pezizales). Other lichen fungi occur in only five orders in which all members are engaged in this habit (Orders Graphidales,
Gyalectales ''Gyalectales'' is an order of lichen-forming fungi in the class Lecanoromycetes. It contains 5 families, 15 genera and about 550 species. Taxonomy The Gyalectales were introduced in a 1974 publication by Aino Henssen and Martin Jahns, but ...
,
Peltigerales Peltigerales is an order of lichen-forming fungi belonging to the class Lecanoromycetes in the division Ascomycota. The taxonomy of the group has seen numerous changes; it was formerly often treated as a suborder of the order Lecanorales. It co ...
, Pertusariales, and
Teloschistales The Teloschistales are an order of mostly lichen-forming fungi belonging to the class Lecanoromycetes in the division Ascomycota. According to one 2008 estimate, the order contains 5 families, 66 genera, and 1954 species. The predominant photobi ...
). Lichenized and nonlichenized fungi can even be found in the same genus or species. Overall, about 98% of lichens have an ascomycetous mycobiont. Next to the Ascomycota, the largest number of lichenized fungi occur in the unassigned
fungi imperfecti The fungi imperfecti or imperfect fungi, are fungi which do not fit into the commonly established taxonomic classifications of fungi that are based on biological species concepts or morphological characteristics of sexual structures because the ...
. Comparatively few
basidiomycetes Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Ba ...
are lichenized, but these include
agarics An agaric () is a type of fungus fruiting body characterized by the presence of a pileus (cap) that is clearly differentiated from the stipe (stalk), with lamellae (gills) on the underside of the pileus. In the UK, agarics are called "mushrooms ...
, such as species of ''
Lichenomphalia ''Lichenomphalia'' is both a basidiolichen and an agaric genus. Most of the species have inconspicuous lichenized thalli that consist of scattered, small, loose, nearly microscopic green balls or foliose small flakes containing single-celled gr ...
'',
clavarioid fungi The clavarioid fungi are a group of fungi in the ''Basidiomycota'' typically having erect, simple or branched basidiocarps (fruit bodies) that are formed on the ground, on decaying vegetation, or on dead wood. They are colloquially called club fun ...
, such as species of ''
Multiclavula ''Multiclavula'' is a genus of basidiolichens in the family Hydnaceae. The widespread genus contains 14 species.Reschke, K., Lotz-Winter, H., Fischer, C.W., Hofmann, T.A., Piepenbring, M., 2021. New and interesting species of Agaricomycetes from ...
'', and
corticioid fungi The corticioid fungi are a group of fungi in the Basidiomycota typically having effused, smooth basidiocarps (fruit bodies) that are formed on the undersides of dead tree trunks or branches. They are sometimes colloquially called crust fungi or pa ...
, such as species of '' Dictyonema''. The
autotroph An autotroph or primary producer is an organism that produces complex organic compounds (such as carbohydrates, fats, and proteins) using carbon from simple substances such as carbon dioxide,Morris, J. et al. (2019). "Biology: How Life Wo ...
ic symbionts occurring in lichens are a wide variety of simple, photosynthetic organisms commonly and traditionally known as algae. These symbionts include both
prokaryotic A prokaryote () is a single-celled organism that lacks a nucleus and other membrane-bound organelles. The word ''prokaryote'' comes from the Greek πρό (, 'before') and κάρυον (, 'nut' or 'kernel').Campbell, N. "Biology:Concepts & Connec ...
and
eukaryotic Eukaryotes () are organisms whose Cell (biology), cells have a cell nucleus, nucleus. All animals, plants, fungi, and many unicellular organisms, are Eukaryotes. They belong to the group of organisms Eukaryota or Eukarya, which is one of the ...
organisms. Approximately 100 species of photosynthetic partners from 40 genera and five distinct classes (prokaryotic: Cyanophyceae; eukaryotic:
Trebouxiophyceae The Trebouxiophyceae are a class of green algae, in the division Chlorophyta. Their circumscription within the green algae is not well established due to the need for more genetic studies at higher levels within the group. Genera without interve ...
, Phaeophyceae, Chlorophyceae) have been found to associate with the lichen-forming fungi. The prokaryotes belong to the Cyanobacteria, whose representatives are often called bluegreen algae. The bluegreen algae occur as symbionts in about 8% of the known lichens. The most commonly occurring genus is ''
Nostoc ''Nostoc'', also known as star jelly, troll’s butter, spit of moon, fallen star, witch's butter (not to be confused with the fungi commonly known as witches' butter), and witch’s jelly, is the most common genus of cyanobacteria found in var ...
''. The majority of the lichens contain eukaryotic autotrophs belonging to the
Chlorophyta Chlorophyta or Prasinophyta is a taxon of green algae informally called chlorophytes. The name is used in two very different senses, so care is needed to determine the use by a particular author. In older classification systems, it refers to a ...
(green algae) or to the Xanthophyta ( yellow-green algae). About 90% of all known lichens have a green alga as a symbiont, and among these, ''
Trebouxia ''Trebouxia'' is a unicellular green alga.Silverside, A. J. (2009). Retrieved from http://www.bioref.lastdragon.org/Chlorophyta/''Trebouxia''.html It is a photosynthetic organism that can exist in almost all habitats found in polar, tropical, a ...
'' is the most common genus, occurring in about 40% of all lichens. The second most commonly represented green alga genus is '' Trentepohlia''. Overall, about 100 species are known to occur as autotrophs in lichens. All the algae are probably able to exist independently in nature as well as in the lichen. A particular fungus species and algal species are not necessarily always associated together in a lichen. One fungus, for example, can form lichens with a variety of different algae. The
thalli Thallus (plural: thalli), from Latinized Greek (), meaning "a green shoot" or "twig", is the vegetative tissue of some organisms in diverse groups such as algae, fungi, some liverworts, lichens, and the Myxogastria. Many of these organisms were ...
produced by a given fungal symbiont with its differing partners will be similar, and the secondary metabolites identical, indicating that the fungus has the dominant role in determining the morphology of the lichen. Further, the same algal species can occur in association with different fungal partners. Lichens are known in which there is one fungus associated with two or even three algal species. Rarely, the reverse can occur, and two or more fungal species can interact to form the same lichen. Both the lichen and the fungus partner bear the same scientific name, and the lichens are being integrated into the classification schemes for fungi. The alga bears its own scientific name, which bears no relationship to that of the lichen or fungi.


Fungus component

Depending on context, the entire lichen, or just the fungus that is part of the lichen. Both the lichen and the fungus that is a part of the lichen are currently (2014) given the same species name, which creates an ambiguity. An example of when "lichenized fungus" refers to just the fungus is when the fungus is grown in culture without a phycobiont. An example where "lichenized fungus" refers to the entire lichen is in a list of classified lichens. Some fungi can only be found living on lichens ( obligate
parasite Parasitism is a close relationship between species, where one organism, the parasite, lives on or inside another organism, the host, causing it some harm, and is adapted structurally to this way of life. The entomologist E. O. Wilson has ...
s), but are not considered part of the lichen. These are referred to as lichenolous fungi.


Photosynthetic component

The photosynthetic component of a lichen is called the
photobiont A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.phycobiont. Sometimes the photobiont is a green algae (
chlorophyta Chlorophyta or Prasinophyta is a taxon of green algae informally called chlorophytes. The name is used in two very different senses, so care is needed to determine the use by a particular author. In older classification systems, it refers to a ...
), sometimes a blue-green aglae ( cyanobacteria, not really an algae), and sometimes both. The layer of tissue containing the cells of the photobiont is called the "photobiontic layer". " Clorococcoid" means a green algae (Chlorophyta) that has single cells that are
globose A sphere () is a geometrical object that is a three-dimensional analogue to a two-dimensional circle. A sphere is the set of points that are all at the same distance from a given point in three-dimensional space.. That given point is the ...
, which is common in lichens.Alan Silverside's Lichen Glossary (a-f), Alan Silverside
/ref> This was once classified in the order
Chlorococcales Chlorococcales is a formerly recognized order of green algae in the class Chlorophyceae. , the type family Chlorococcaceae was placed in the order Chlamydomonadales. Conventionally, many groups of coccoid green algae were lumped in the order Ch ...
, which you may find stated in older literature, but new DNA data shows many independent lines of evolution exist among this formerly large taxonomic group.
Chlorococcales Chlorococcales is a formerly recognized order of green algae in the class Chlorophyceae. , the type family Chlorococcaceae was placed in the order Chlamydomonadales. Conventionally, many groups of coccoid green algae were lumped in the order Ch ...
is now a relatively small order and may no longer include any lichen photobionts.
Trebouxia ''Trebouxia'' is a unicellular green alga.Silverside, A. J. (2009). Retrieved from http://www.bioref.lastdragon.org/Chlorophyta/''Trebouxia''.html It is a photosynthetic organism that can exist in almost all habitats found in polar, tropical, a ...
, once included here, is now considered to be in a separate class,
Trebouxiophyceae The Trebouxiophyceae are a class of green algae, in the division Chlorophyta. Their circumscription within the green algae is not well established due to the need for more genetic studies at higher levels within the group. Genera without interve ...
. " trebouxioid" refers to members of this class or algae resembling them. " Trebouxioid" means a clorococcoid green algae photobiont is in the genus ''
Trebouxia ''Trebouxia'' is a unicellular green alga.Silverside, A. J. (2009). Retrieved from http://www.bioref.lastdragon.org/Chlorophyta/''Trebouxia''.html It is a photosynthetic organism that can exist in almost all habitats found in polar, tropical, a ...
'', or resembles a member of that genus, and is therefore presumably a member of the class
Trebouxiophyceae The Trebouxiophyceae are a class of green algae, in the division Chlorophyta. Their circumscription within the green algae is not well established due to the need for more genetic studies at higher levels within the group. Genera without interve ...
.Alan Silverside's Lichen Glossary (p-z), Alan Silverside
/ref>


Cyanolichens

A
cyanolichen Cyanolichens are lichens that apart from the basic fungal component ("mycobiont"), contain cyanobacteria, otherwise known as blue-green algae, as the photosynthesizing component ("photobiont"). Overall, about a third of lichen photobionts are cyan ...
is a lichen with a cyanobacteria as its main photosynthetic component (
photobiont A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.limestone Limestone ( calcium carbonate ) is a type of carbonate sedimentary rock which is the main source of the material lime. It is composed mostly of the minerals calcite and aragonite, which are different crystal forms of . Limestone forms whe ...
as the substrate. Another cyanolichen group, the jelly lichens ( e.g., from the genera ''
Collema ''Collema'' (jelly lichen) is a genus of lichens in the family Collemataceae. The photobiont is the cyanobacterium genus ''Nostoc''.Dobson, F.S. (2000) Lichens, an illustrated guide to the British and Irish species. 4th edition. Richmond publish ...
'' or '' Leptogium'') are large and
foliose Foliose lichen is one of the morphological classes of lichens, which are complex organisms that arise from the symbiotic relationship between fungi and a photosynthetic partner, typically algae. This partnership allows lichen to live in diverse ...
(e.g., species of ''
Peltigera ''Peltigera'' is a genus of approximately 100 species of foliose lichens in the family Peltigeraceae. Commonly known as the dog or pelt lichens, species of ''Peltigera'' are often terricolous (growing on soil), but can also occur on moss, trees, ...
'', ''
Lobaria ''Lobaria'' is a genus of foliose lichens, formerly classified in the family (biology), family Lobariaceae, but now placed in the Peltigeraceae. They are commonly known as "lung wort" or "lungmoss" as their physical shape somewhat resembles a lu ...
'', and '' Degelia''. These lichen species are grey-blue, especially when dampend or wet. Many of these characterize the Lobarion communities of higher rainfall areas in western Britain, e.g., in the Celtic Rainforest.


References

{{Reflist Lichenology