Enterobacteria Rnk Leader
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The Enterobacteria rnk leader is a putative attenuator element identified by
bioinformatics Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combi ...
within bacteria of the γ-proteobacterial
Enterobacteriales Enterobacterales is an order of Gram-negative bacteria, Gram-negative, non-spore forming, Facultative anaerobic organism, facultatively anaerobic, rod-shaped bacteria with the class Gammaproteobacteria. The type genus of this order is ''Enterob ...
order. It is located upstream of the ''rnk'' gene, encoding a
nucleoside diphosphate kinase Nucleoside-diphosphate kinases (NDPKs, also NDP kinase, (poly)nucleotide kinases and nucleoside diphosphokinases) are enzymes that catalyze the exchange of terminal phosphate between different nucleoside diphosphates (NDP) and triphosphates (NTP) ...
regulator, and presents a Rho-independent terminator at the 3' end. This
RNA Ribonucleic acid (RNA) is a polymeric molecule essential in various biological roles in coding, decoding, regulation and expression of genes. RNA and deoxyribonucleic acid ( DNA) are nucleic acids. Along with lipids, proteins, and carbohydra ...
is presumed to operate as a non-coding leader, which regulatory mechanism remains to be elucidated. The motif might be related to other rnk-and greA-leaders, such as
Pseudomonas rnk leader The ''Pseudomonas'' rnk leader is a putative attenuator element identified by bioinformatics within bacteria of the γ-proteobacterial ''Pseudomonas'' genus. It is located upstream of the ''rnk'' gene, encoding a nucleoside diphosphate kinase reg ...
.


See also

*
Gammaproteobacteria rimP leader The γ-proteobacterial rimP leader is a putative attenuator element identified by bioinformatics within bacteria of the γ-proteobacterial phylum. It is located upstream of the ''rimP-nusA-infB'' operon encoding RimP, a protein shown to be involved ...


References


External links

*{{Rfam, id=RF01771, name=Enterobacteria rnk leader Cis-regulatory RNA elements